RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 MYL3P08590 195 aa19.32■□□□□ 0.68
LIME1-202ENST00000444951 DNAJB2P25686 324 aa19.32■□□□□ 0.68
LIME1-202ENST00000444951 TCF7P36402 384 aaPredicted RBP19.32■□□□□ 0.68
LIME1-202ENST00000444951 JAK3P52333 1124 aa19.32■□□□□ 0.68
LIME1-202ENST00000444951 CHMP4BP1P59074 171 aa19.32■□□□□ 0.68
LIME1-202ENST00000444951 PPIGQ13427 754 aaKnown RBP eCLIP19.32■□□□□ 0.686e-9■■■■□ 19.6
LIME1-202ENST00000444951 ITGA7Q13683 1181 aa19.32■□□□□ 0.68
LIME1-202ENST00000444951 RASIP1Q5U651 963 aa19.32■□□□□ 0.68
LIME1-202ENST00000444951 MIS18BP1Q6P0N0 1132 aa19.32■□□□□ 0.68
LIME1-202ENST00000444951 MAFAQ8NHW3 353 aaPredicted RBP19.32■□□□□ 0.68
LIME1-202ENST00000444951 PPTC7Q8NI37 304 aa19.32■□□□□ 0.68
LIME1-202ENST00000444951 SEPT1Q8WYJ6 367 aa19.32■□□□□ 0.68
LIME1-202ENST00000444951 EMID1Q96A84 441 aaPredicted RBP19.32■□□□□ 0.68
LIME1-202ENST00000444951 GBP4Q96PP9 640 aa19.32■□□□□ 0.68
LIME1-202ENST00000444951 Q9Y3F1 56 aa19.32■□□□□ 0.68
LIME1-202ENST00000444951 TLR3O15455 904 aaKnown RBP19.31■□□□□ 0.68
LIME1-202ENST00000444951 CUTAO60888 179 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 PSAPP07602 524 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 MMP3P08254 477 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 SFNP31947 248 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 LONP1P36776 959 aaKnown RBP19.31■□□□□ 0.68
LIME1-202ENST00000444951 PBX2P40425 430 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 CPT1AP50416 773 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 CYP4A11Q02928 519 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 PDIA5Q14554 519 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 GRIN2CQ14957 1233 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 BRDTQ58F21 947 aaPredicted RBP19.31■□□□□ 0.68
LIME1-202ENST00000444951 SWSAP1Q6NVH7 229 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 ZNF365Q70YC5 407 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 TRMT1LQ7Z2T5 733 aaKnown RBP19.31■□□□□ 0.68
LIME1-202ENST00000444951 SMAP1Q8IYB5 467 aaPredicted RBP19.31■□□□□ 0.68
LIME1-202ENST00000444951 IGSF22Q8N9C0 903 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 BANK1Q8NDB2 785 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 ERMNQ8TAM6 284 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 DYDC2Q96IM9 177 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 COL25A1Q9BXS0 654 aaPredicted RBP19.31■□□□□ 0.68
LIME1-202ENST00000444951 TRPV6Q9H1D0 765 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 PCDHA10Q9Y5I2 948 aa19.31■□□□□ 0.68
LIME1-202ENST00000444951 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.3■□□□□ 0.68
LIME1-202ENST00000444951 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.3■□□□□ 0.68
LIME1-202ENST00000444951 GOLGA6L4A6NEF3 574 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 B4GALT4O60513 344 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 SUPT20HL2P0C7V6 817 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 ZNF286BP0CG31 522 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 CCT6AP40227 531 aaKnown RBP19.3■□□□□ 0.68
LIME1-202ENST00000444951 CSPP1Q1MSJ5 1256 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 B3GNT9Q6UX72 402 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 ABHD15Q6UXT9 468 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 TRIM50Q86XT4 487 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 TMEM199Q8N511 208 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 RASSF8Q8NHQ8 419 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 SNX29Q8TEQ0 813 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 PPP1R13LQ8WUF5 828 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 GLG1Q92896 1179 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 EIF2AK1Q9BQI3 630 aaKnown RBP19.3■□□□□ 0.68
LIME1-202ENST00000444951 RGL1Q9NZL6 768 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 GABBR1Q9UBS5 961 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 CHD7Q9P2D1 2997 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 MYO9BQ13459 2157 aa19.3■□□□□ 0.68
LIME1-202ENST00000444951 GBF1Q92538 1859 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 TMEM265A0A087WTH1 108 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 A6NJR5 290 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 CABYRO75952 493 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 FOSL2P15408 326 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 UBA7P41226 1012 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 CTTNQ14247 550 aaKnown RBP19.29■□□□□ 0.68
LIME1-202ENST00000444951 EPHA7Q15375 998 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 DGKDQ16760 1214 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 AXDND1Q5T1B0 1012 aaPredicted RBP19.29■□□□□ 0.68
LIME1-202ENST00000444951 KRT79Q5XKE5 535 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 USP49Q70CQ1 688 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 CCDC60Q8IWA6 550 aaPredicted RBP19.29■□□□□ 0.68
LIME1-202ENST00000444951 TPH2Q8IWU9 490 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 VWCEQ96DN2 955 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 EPSTI1Q96J88 318 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 PLIN2Q99541 437 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 NOC4LQ9BVI4 516 aaKnown RBP19.29■□□□□ 0.68
LIME1-202ENST00000444951 PBX4Q9BYU1 374 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 WNT8AQ9H1J5 351 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 HIPK3Q9H422 1215 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 AZI2Q9H6S1 392 aa19.29■□□□□ 0.68
LIME1-202ENST00000444951 CXXC1Q9P0U4 656 aaPredicted RBP19.29■□□□□ 0.68
LIME1-202ENST00000444951 MORC2Q9Y6X9 1032 aaPredicted RBP19.29■□□□□ 0.68
LIME1-202ENST00000444951 PRPF40AO75400 957 aaKnown RBP19.28■□□□□ 0.68
LIME1-202ENST00000444951 ATG7O95352 703 aa19.28■□□□□ 0.68
LIME1-202ENST00000444951 LGALS2P05162 132 aa19.28■□□□□ 0.68
LIME1-202ENST00000444951 MARK3P27448 753 aa19.28■□□□□ 0.68
LIME1-202ENST00000444951 CCL23P55773 120 aa19.28■□□□□ 0.68
LIME1-202ENST00000444951 UGCGQ16739 394 aa19.28■□□□□ 0.68
LIME1-202ENST00000444951 FAM160B1Q5W0V3 765 aa19.28■□□□□ 0.68
LIME1-202ENST00000444951 SHC4Q6S5L8 630 aa19.28■□□□□ 0.68
LIME1-202ENST00000444951 CABP7Q86V35 215 aa19.28■□□□□ 0.68
LIME1-202ENST00000444951 CKAP2LQ8IYA6 745 aa19.28■□□□□ 0.68
LIME1-202ENST00000444951 SYMPKQ92797 1274 aaKnown RBP19.28■□□□□ 0.68
LIME1-202ENST00000444951 TIFAQ96CG3 184 aa19.28■□□□□ 0.68
LIME1-202ENST00000444951 AK8Q96MA6 479 aa19.28■□□□□ 0.68
LIME1-202ENST00000444951 PANK2Q9BZ23 570 aa19.28■□□□□ 0.68
LIME1-202ENST00000444951 IL23AQ9NPF7 189 aa19.28■□□□□ 0.68
LIME1-202ENST00000444951 ZNF302Q9NR11 478 aa19.28■□□□□ 0.68
LIME1-202ENST00000444951 SCN10AQ9Y5Y9 1956 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms