RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 MBLAC1A4D2B0 266 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-211ENST00000443563 WNT7AO00755 349 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 OATP04181 439 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 PFKMP08237 780 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 CKBP12277 381 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 SELPP16109 830 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 ITGB8P26012 769 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 QARSP47897 775 aaKnown RBP12.17□□□□□ -0.46
HDAC6-211ENST00000443563 CCL23P55773 120 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 PSMC5P62195 406 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 IGBP1P78318 339 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 ZNF200P98182 395 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-211ENST00000443563 PRKCEQ02156 737 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 XKR3Q5GH77 459 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 RPAINQ86UA6 219 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 ERMNQ8TAM6 284 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 CTAGE1Q96RT6 745 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 RAB34Q9BZG1 259 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 PRO3102Q9H379 93 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 ZSCAN16Q9H4T2 348 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-211ENST00000443563 IL23AQ9NPF7 189 aa12.17□□□□□ -0.46
HDAC6-211ENST00000443563 COLQQ9Y215 455 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-211ENST00000443563 MAGEB2O15479 319 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 STX6O43752 255 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 BMP15O95972 392 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 IQCF3P0C7M6 154 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 CSF2RAP15509 400 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 ATP4AP20648 1035 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 THPOP40225 353 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 PRPHP41219 470 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 TOB1P50616 345 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-211ENST00000443563 SPIRE1Q08AE8 756 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 HIC1Q14526 733 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 TRIM71Q2Q1W2 868 aaKnown RBP12.16□□□□□ -0.46
HDAC6-211ENST00000443563 PSRC1Q6PGN9 363 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-211ENST00000443563 LRRC8DQ7L1W4 858 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 EXOC8Q8IYI6 725 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 TDHQ8IZJ6 230 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 DHX38Q92620 1227 aaKnown RBP12.16□□□□□ -0.46
HDAC6-211ENST00000443563 WNT8AQ9H1J5 351 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 TMEM60Q9H2L4 133 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 ZSWIM4Q9H7M6 989 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.16□□□□□ -0.46
HDAC6-211ENST00000443563 PPME1Q9Y570 386 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 PCDHB6Q9Y5E3 794 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 PCDHA2Q9Y5H9 948 aa12.16□□□□□ -0.46
HDAC6-211ENST00000443563 UMODL1Q5DID0 1318 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 SMIM35A0A1B0GVV1 85 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 M0QZ92 97 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 EML1O00423 815 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 ZNF862O60290 1169 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 ACTN1P12814 892 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 KLRC1P26715 233 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 TMOD1P28289 359 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 TECP42680 631 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 FXR2P51116 673 aaKnown RBP eCLIP12.15□□□□□ -0.46
HDAC6-211ENST00000443563 PTGDRQ13258 359 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 PDIA5Q14554 519 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 UGCGQ16739 394 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 MARCH8Q5T0T0 291 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 MTHFD1LQ6UB35 978 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 DTHD1Q6ZMT9 781 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 OTUD6AQ7L8S5 288 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 C4orf19Q8IY42 314 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 NME8Q8N427 588 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 C4orf32Q8N8J7 132 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 BANK1Q8NDB2 785 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 SCLYQ96I15 445 aa12.15□□□□□ -0.46
HDAC6-211ENST00000443563 EIF2AK1Q9BQI3 630 aaKnown RBP12.15□□□□□ -0.46
HDAC6-211ENST00000443563 JPH2Q9BR39 696 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-211ENST00000443563 NIFKQ9BYG3 293 aaKnown RBP12.15□□□□□ -0.46
HDAC6-211ENST00000443563 MTIF3Q9H2K0 278 aaKnown RBP12.15□□□□□ -0.46
HDAC6-211ENST00000443563 SEPT9Q9UHD8 586 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-211ENST00000443563 SCN5AQ14524 2016 aa12.15□□□□□ -0.47
HDAC6-211ENST00000443563 MYH15Q9Y2K3 1946 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 DDX11L8A8MPP1 907 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 RSPH10B2B2RC85 870 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 FGBP02675 491 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 RSPH10BP0C881 870 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 MUTP22033 750 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 NBR1Q14596 966 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 ZNF618Q5T7W0 954 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 IER5Q5VY09 327 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 HAUS3Q68CZ6 603 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 TRMT1LQ7Z2T5 733 aaKnown RBP12.14□□□□□ -0.47
HDAC6-211ENST00000443563 FERMT3Q86UX7 667 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 ZNF710Q8N1W2 664 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 DYDC2Q96IM9 177 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 LXNQ9BS40 222 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 MTMR6Q9Y217 621 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 ARID2Q68CP9 1835 aa12.14□□□□□ -0.47
HDAC6-211ENST00000443563 LOXHD1Q8IVV2 1947 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 EVPLQ92817 2033 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 POTEMA6NI47 508 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 ZBTB42B2RXF5 422 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 SLITRK3O94933 977 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 LYPLA2O95372 231 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 DNM2P50570 870 aa12.13□□□□□ -0.47
HDAC6-211ENST00000443563 ATP2C1P98194 919 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-211ENST00000443563 CYP4A11Q02928 519 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms