RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 HBP1O60381 514 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 CPA1P15085 419 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 RPS6KB1P23443 525 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 CD52P31358 61 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 HSPA4P34932 840 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 PAK2Q13177 524 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 PDXDC2PQ6P474 469 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 CKAP2LQ8IYA6 745 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 NECAB3Q96P71 396 aaPredicted RBP13.38□□□□□ -0.27
TTC28-203ENST00000442232 ZNF577Q9BSK1 485 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 C11orf84Q9BUA3 381 aaPredicted RBP13.38□□□□□ -0.27
TTC28-203ENST00000442232 OSBPL7Q9BZF2 842 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 ZNF302Q9NR11 478 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 FAM217BQ9NTX9 383 aaPredicted RBP13.38□□□□□ -0.27
TTC28-203ENST00000442232 TBC1D22BQ9NU19 505 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 SNX14Q9Y5W7 946 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 TTC3P53804 2025 aa13.38□□□□□ -0.27
TTC28-203ENST00000442232 EVPLQ92817 2033 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 IPO5O00410 1097 aaKnown RBP13.37□□□□□ -0.27
TTC28-203ENST00000442232 CYP3A4P08684 503 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 STAG3L1P0CL83 205 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 KCNA5P22460 613 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 KRT76Q01546 638 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 TMEM62Q0P6H9 643 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 BTG3Q14201 252 aaPredicted RBP13.37□□□□□ -0.27
TTC28-203ENST00000442232 ODR4Q5SWX8 454 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 MTHFD1LQ6UB35 978 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 EP400NLQ6ZTU2 488 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 NME8Q8N427 588 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 BANK1Q8NDB2 785 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 ATP8B4Q8TF62 1192 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 TRAPPC12Q8WVT3 735 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 KCNB2Q92953 911 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 C1QTNF1Q9BXJ1 281 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 SLC26A6Q9BXS9 759 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 ZMYND12Q9H0C1 365 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 RNF216Q9NWF9 866 aaPredicted RBP13.37□□□□□ -0.27
TTC28-203ENST00000442232 LRFN2Q9ULH4 789 aa13.37□□□□□ -0.27
TTC28-203ENST00000442232 FAM86B1E9PN63 330 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 ENPP3O14638 875 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 ATG7O95352 703 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 RB1P06400 928 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 NEFLP07196 543 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 PSAPP07602 524 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 FAM86B2P0C5J1 330 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 ZNF484Q5JVG2 852 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 ZNF746Q6NUN9 644 aaPredicted RBP13.36□□□□□ -0.27
TTC28-203ENST00000442232 ABHD15Q6UXT9 468 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 FAM43BQ6ZT52 329 aaPredicted RBP13.36□□□□□ -0.27
TTC28-203ENST00000442232 NPAS4Q8IUM7 802 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 SMAP1Q8IYB5 467 aaPredicted RBP13.36□□□□□ -0.27
TTC28-203ENST00000442232 TRIM22Q8IYM9 498 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 PHKBQ93100 1093 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 ZBTB10Q96DT7 871 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 RNF26Q9BY78 433 aaPredicted RBP13.36□□□□□ -0.27
TTC28-203ENST00000442232 CELF4Q9BZC1 486 aaKnown RBP13.36□□□□□ -0.27
TTC28-203ENST00000442232 LMAN2LQ9H0V9 348 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 NSUN3Q9H649 340 aaKnown RBP13.36□□□□□ -0.27
TTC28-203ENST00000442232 FAM50BQ9Y247 325 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 GINS2Q9Y248 185 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 SAMM50Q9Y512 469 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 WDR81Q562E7 1941 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 KIAA1671Q9BY89 1806 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 IGSF9BQ9UPX0 1349 aa13.36□□□□□ -0.27
TTC28-203ENST00000442232 RBAK-RBAKDNI3L0D1 243 aa13.35□□□□□ -0.27
TTC28-203ENST00000442232 CCNE2O96020 404 aa13.35□□□□□ -0.27
TTC28-203ENST00000442232 IBSPP21815 317 aaPredicted RBP13.35□□□□□ -0.27
TTC28-203ENST00000442232 KLRC1P26715 233 aa13.35□□□□□ -0.27
TTC28-203ENST00000442232 BMPR1AP36894 532 aa13.35□□□□□ -0.27
TTC28-203ENST00000442232 PUS10Q3MIT2 529 aaKnown RBP13.35□□□□□ -0.27
TTC28-203ENST00000442232 PRR16Q569H4 304 aa13.35□□□□□ -0.27
TTC28-203ENST00000442232 SWSAP1Q6NVH7 229 aa13.35□□□□□ -0.27
TTC28-203ENST00000442232 CCDC60Q8IWA6 550 aaPredicted RBP13.35□□□□□ -0.27
TTC28-203ENST00000442232 FBXL16Q8N461 479 aa13.35□□□□□ -0.27
TTC28-203ENST00000442232 PPP2R3CQ969Q6 453 aa13.35□□□□□ -0.27
TTC28-203ENST00000442232 PADI3Q9ULW8 664 aa13.35□□□□□ -0.27
TTC28-203ENST00000442232 CEP131Q9UPN4 1083 aa13.35□□□□□ -0.27
TTC28-203ENST00000442232 KDM3AQ9Y4C1 1321 aa13.35□□□□□ -0.27
TTC28-203ENST00000442232 ATG2AQ2TAZ0 1938 aa13.35□□□□□ -0.27
TTC28-203ENST00000442232 IGLV3-22A0A075B6J6 115 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 IGKV6D-21A0A0A0MT36 114 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 DENND3A2RUS2 1198 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 C5orf67F2Z3F1 127 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 CPLX1O14810 134 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 NCK2O43639 380 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 RPS6KA5O75582 802 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 IFNAR1P17181 557 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 COL9A1P20849 921 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 NLRP5P59047 1200 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 NFX1Q12986 1120 aaKnown RBP13.34□□□□□ -0.27
TTC28-203ENST00000442232 LEXMQ3ZCV2 418 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 TCEAL5Q5H9L2 206 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 CPLX2Q6PUV4 134 aaKnown RBP13.34□□□□□ -0.27
TTC28-203ENST00000442232 CMTR2Q8IYT2 770 aaKnown RBP13.34□□□□□ -0.27
TTC28-203ENST00000442232 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
TTC28-203ENST00000442232 FAM167AQ96KS9 214 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 UIMC1Q96RL1 719 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 PLVAPQ9BX97 442 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 C22orf23Q9BZE7 217 aa13.34□□□□□ -0.27
TTC28-203ENST00000442232 AGO3Q9H9G7 860 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms