RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 RILPL1Q5EBL4 403 aa16.92■□□□□ 0.3
CSNK1E-210ENST00000442216 MARCH8Q5T0T0 291 aa16.92■□□□□ 0.3
CSNK1E-210ENST00000442216 PSRC1Q6PGN9 363 aaPredicted RBP16.92■□□□□ 0.3
CSNK1E-210ENST00000442216 CKAP2LQ8IYA6 745 aa16.92■□□□□ 0.3
CSNK1E-210ENST00000442216 TTC12Q9H892 705 aaPredicted RBP16.92■□□□□ 0.3
CSNK1E-210ENST00000442216 NRBP2Q9NSY0 501 aa16.92■□□□□ 0.3
CSNK1E-210ENST00000442216 CEP131Q9UPN4 1083 aa16.92■□□□□ 0.3
CSNK1E-210ENST00000442216 LOXHD1Q8IVV2 1947 aa16.92■□□□□ 0.3
CSNK1E-210ENST00000442216 TET1Q8NFU7 2136 aa16.91■□□□□ 0.3
CSNK1E-210ENST00000442216 PDIA4P13667 645 aaKnown RBP16.91■□□□□ 0.3
CSNK1E-210ENST00000442216 ATP2B1P20020 1258 aa16.91■□□□□ 0.3
CSNK1E-210ENST00000442216 HABP4Q5JVS0 413 aaKnown RBP16.91■□□□□ 0.3
CSNK1E-210ENST00000442216 LRRC8DQ7L1W4 858 aa16.91■□□□□ 0.3
CSNK1E-210ENST00000442216 RSPH3Q86UC2 560 aa16.91■□□□□ 0.3
CSNK1E-210ENST00000442216 PCDH10Q9P2E7 1040 aa16.91■□□□□ 0.3
CSNK1E-210ENST00000442216 PCDHA2Q9Y5H9 948 aa16.91■□□□□ 0.3
CSNK1E-210ENST00000442216 SIP14410 1827 aa16.91■□□□□ 0.3
CSNK1E-210ENST00000442216 EML1O00423 815 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 LAD1O00515 517 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 ZNF862O60290 1169 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 OATP04181 439 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 P4HBP07237 508 aaKnown RBP16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 OR52Z1P0C646 297 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 THPOP40225 353 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 TXKP42681 527 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 TOB1P50616 345 aaPredicted RBP16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 PSMC5P62195 406 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 PRKCEQ02156 737 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 ZNF174Q15697 407 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 TMEM240Q5SV17 173 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 BRAPQ7Z569 592 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 NEK9Q8TD19 979 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 WNT8BQ93098 351 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 SCLYQ96I15 445 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 TMEM60Q9H2L4 133 aa16.9■□□□□ 0.3
CSNK1E-210ENST00000442216 ARID2Q68CP9 1835 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 SMIM35A0A1B0GVV1 85 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 SYT1P21579 422 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 QARSP47897 775 aaKnown RBP16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 EPHB4P54760 987 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 IGBP1P78318 339 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 SHHQ15465 462 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 UGCGQ16739 394 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 LRIT3Q3SXY7 679 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 XKR3Q5GH77 459 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 FAM26DQ5JW98 314 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 ZNF618Q5T7W0 954 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 TRAF7Q6Q0C0 670 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 MTHFD1LQ6UB35 978 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 C16orf59Q7L2K0 433 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 NME8Q8N427 588 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 C4orf32Q8N8J7 132 aa16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 NIFKQ9BYG3 293 aaKnown RBP16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.89■□□□□ 0.29
CSNK1E-210ENST00000442216 TRIOBPQ9H2D6 2365 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 MYH15Q9Y2K3 1946 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 RSPH10B2B2RC85 870 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 ZBTB42B2RXF5 422 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 MAGEB2O15479 319 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 FGBP02675 491 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 CXCL10P02778 98 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 RSPH10BP0C881 870 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 KLRC1P26715 233 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 NCAPH2Q6IBW4 605 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 RUFY4Q6ZNE9 571 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 ZNF365Q70YC5 407 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 C4orf19Q8IY42 314 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 VWCEQ96DN2 955 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.88■□□□□ 0.292e-6■■■□□ 18.8
CSNK1E-210ENST00000442216 MTIF3Q9H2K0 278 aaKnown RBP16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 PPME1Q9Y570 386 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 PCDHB6Q9Y5E3 794 aa16.88■□□□□ 0.29
CSNK1E-210ENST00000442216 VPS37CA5D8V6 355 aaPredicted RBP16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 STBD1O95210 358 aa16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 HSP90AA1P07900 732 aaKnown RBP16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 ACRP10323 421 aa16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 ACTN1P12814 892 aa16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 PRPHP41219 470 aa16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 PTGDRQ13258 359 aa16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 TARBP2Q15633 366 aaKnown RBP16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 TMEM266Q2M3C6 531 aa16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 C9orf50Q5SZB4 431 aa16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 RASIP1Q5U651 963 aa16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 BANK1Q8NDB2 785 aa16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 TRAPPC12Q8WVT3 735 aa16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 DNAJB3Q8WWF6 145 aa16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 HERVK_113Q902F9 699 aa16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 HSD17B14Q9BPX1 270 aa16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 ZSWIM4Q9H7M6 989 aa16.87■□□□□ 0.29
CSNK1E-210ENST00000442216 MICAL3Q7RTP6 2002 aa16.86■□□□□ 0.29
CSNK1E-210ENST00000442216 LYPLA2O95372 231 aa16.86■□□□□ 0.29
CSNK1E-210ENST00000442216 C22orf31O95567 290 aa16.86■□□□□ 0.29
CSNK1E-210ENST00000442216 FXR2P51116 673 aaKnown RBP eCLIP16.86■□□□□ 0.29
CSNK1E-210ENST00000442216 PDIA5Q14554 519 aa16.86■□□□□ 0.29
CSNK1E-210ENST00000442216 GPNMBQ14956 572 aa16.86■□□□□ 0.29
CSNK1E-210ENST00000442216 IER5Q5VY09 327 aa16.86■□□□□ 0.29
CSNK1E-210ENST00000442216 DEFB128Q7Z7B8 93 aa16.86■□□□□ 0.29
CSNK1E-210ENST00000442216 ZNF710Q8N1W2 664 aa16.86■□□□□ 0.29
CSNK1E-210ENST00000442216 RNPC3Q96LT9 517 aaKnown RBP16.86■□□□□ 0.29
CSNK1E-210ENST00000442216 EIF2AK1Q9BQI3 630 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms