RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 LMAN2LQ9H0V9 348 aa8.85□□□□□ -0.99
CD44-211ENST00000442151 CERS4Q9HA82 394 aa8.85□□□□□ -0.99
CD44-211ENST00000442151 TUBE1Q9UJT0 475 aa8.85□□□□□ -0.99
CD44-211ENST00000442151 PCDHA2Q9Y5H9 948 aa8.85□□□□□ -0.99
CD44-211ENST00000442151 TANC1Q9C0D5 1861 aa8.85□□□□□ -0.99
CD44-211ENST00000442151 GSTTP1A0A1W2PQM5 241 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 ESYT2A0FGR8 921 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 LINC01553A4QN01 128 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 PRPF3O43395 683 aaKnown RBP8.84□□□□□ -0.99
CD44-211ENST00000442151 HBP1O60381 514 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 ITGB5P18084 799 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 RXRAP19793 462 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 DEFB103AP81534 67 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 SETQ01105 290 aaPredicted RBP8.84□□□□□ -0.99
CD44-211ENST00000442151 UBE2SQ16763 222 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 PFKFB3Q16875 520 aaPredicted RBP8.84□□□□□ -0.99
CD44-211ENST00000442151 TIGD5Q53EQ6 642 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 ZNF484Q5JVG2 852 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 CMTR1Q8N1G2 835 aaKnown RBP8.84□□□□□ -0.99
CD44-211ENST00000442151 FIBCD1Q8N539 461 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 ZNF454Q8N9F8 522 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 LMBR1Q8WVP7 490 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 PPP2R3CQ969Q6 453 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 MFRPQ9BY79 579 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 LRRC2Q9BYS8 371 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 ANO3Q9BYT9 981 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 KCNH7Q9NS40 1196 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 CDH23Q9H251 3354 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 EYSQ5T1H1 3165 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 BAZ2BQ9UIF8 2168 aaKnown RBP8.84□□□□□ -0.99
CD44-211ENST00000442151 STXBP3O00186 592 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 MEIS1O00470 390 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 BACH1O14867 736 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 ATP9AO75110 1047 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 CYP3A4P08684 503 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 SCG2P13521 617 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 SREBF1P36956 1147 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 ADAM17P78536 824 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 NAALADL2Q58DX5 795 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 WWC2Q6AWC2 1192 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 FAM117BQ6P1L5 589 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 PLA2G4DQ86XP0 818 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 TRIM22Q8IYM9 498 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 ADAMTS19Q8TE59 1207 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 KCNB2Q92953 911 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 JAKMIP1Q96N16 626 aaKnown RBP8.84□□□□□ -0.99
CD44-211ENST00000442151 C1QTNF1Q9BXJ1 281 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 CEP131Q9UPN4 1083 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 KAT6AQ92794 2004 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 COL1A2P08123 1366 aa8.84□□□□□ -0.99
CD44-211ENST00000442151 CNTNAP5Q8WYK1 1306 aa8.83□□□□□ -1
CD44-211ENST00000442151 SCN5AQ14524 2016 aa8.83□□□□□ -1
CD44-211ENST00000442151 SMIM35A0A1B0GVV1 85 aa8.83□□□□□ -1
CD44-211ENST00000442151 MBLAC1A4D2B0 266 aaPredicted RBP8.83□□□□□ -1
CD44-211ENST00000442151 ATG7O95352 703 aa8.83□□□□□ -1
CD44-211ENST00000442151 CTSHP09668 335 aa8.83□□□□□ -1
CD44-211ENST00000442151 INSRRP14616 1297 aa8.83□□□□□ -1
CD44-211ENST00000442151 ACTR2P61160 394 aa8.83□□□□□ -1
CD44-211ENST00000442151 MRPS6P82932 125 aaKnown RBP8.83□□□□□ -1
CD44-211ENST00000442151 CDC42EP1Q00587 391 aa8.83□□□□□ -1
CD44-211ENST00000442151 KRT76Q01546 638 aa8.83□□□□□ -1
CD44-211ENST00000442151 GPM6BQ13491 265 aa8.83□□□□□ -1
CD44-211ENST00000442151 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.83□□□□□ -1
CD44-211ENST00000442151 TSHZ1Q6ZSZ6 1077 aa8.83□□□□□ -1
CD44-211ENST00000442151 Q6ZUG5 572 aa8.83□□□□□ -1
CD44-211ENST00000442151 SMAP1Q8IYB5 467 aaPredicted RBP8.83□□□□□ -1
CD44-211ENST00000442151 MRPL38Q96DV4 380 aaKnown RBP8.83□□□□□ -1
CD44-211ENST00000442151 FAM167AQ96KS9 214 aa8.83□□□□□ -1
CD44-211ENST00000442151 PLVAPQ9BX97 442 aa8.83□□□□□ -1
CD44-211ENST00000442151 SUGCTQ9HAC7 445 aa8.83□□□□□ -1
CD44-211ENST00000442151 AGO4Q9HCK5 861 aaKnown RBP8.83□□□□□ -1
CD44-211ENST00000442151 SH3GLB2Q9NR46 395 aa8.83□□□□□ -1
CD44-211ENST00000442151 NRBP2Q9NSY0 501 aa8.83□□□□□ -1
CD44-211ENST00000442151 LRFN2Q9ULH4 789 aa8.83□□□□□ -1
CD44-211ENST00000442151 TRPV2Q9Y5S1 764 aa8.83□□□□□ -1
CD44-211ENST00000442151 DNAH12Q6ZR08 3092 aa8.83□□□□□ -1
CD44-211ENST00000442151 hCG_1642624A0A1W2PR95 340 aa8.82□□□□□ -1
CD44-211ENST00000442151 H3BNC9 293 aa8.82□□□□□ -1
CD44-211ENST00000442151 RFXAPO00287 272 aa8.82□□□□□ -1
CD44-211ENST00000442151 MAGEB2O15479 319 aa8.82□□□□□ -1
CD44-211ENST00000442151 UPP2O95045 317 aa8.82□□□□□ -1
CD44-211ENST00000442151 PSAPP07602 524 aa8.82□□□□□ -1
CD44-211ENST00000442151 MARK3P27448 753 aa8.82□□□□□ -1
CD44-211ENST00000442151 TMOD1P28289 359 aa8.82□□□□□ -1
CD44-211ENST00000442151 HSPA4P34932 840 aa8.82□□□□□ -1
CD44-211ENST00000442151 USP11P51784 963 aa8.82□□□□□ -1
CD44-211ENST00000442151 HIC1Q14526 733 aa8.82□□□□□ -1
CD44-211ENST00000442151 MBTPS1Q14703 1052 aa8.82□□□□□ -1
CD44-211ENST00000442151 GALNT17Q6IS24 598 aa8.82□□□□□ -1
CD44-211ENST00000442151 ZNF746Q6NUN9 644 aaPredicted RBP8.82□□□□□ -1
CD44-211ENST00000442151 TMEM192Q8IY95 271 aa8.82□□□□□ -1
CD44-211ENST00000442151 CKAP2LQ8IYA6 745 aa8.82□□□□□ -1
CD44-211ENST00000442151 REXO1Q8N1G1 1221 aaKnown RBP8.82□□□□□ -1
CD44-211ENST00000442151 DNAJB3Q8WWF6 145 aa8.82□□□□□ -1
CD44-211ENST00000442151 ZNF577Q9BSK1 485 aa8.82□□□□□ -1
CD44-211ENST00000442151 C11orf84Q9BUA3 381 aaPredicted RBP8.82□□□□□ -1
CD44-211ENST00000442151 RNF26Q9BY78 433 aaPredicted RBP8.82□□□□□ -1
CD44-211ENST00000442151 ZMYND12Q9H0C1 365 aa8.82□□□□□ -1
CD44-211ENST00000442151 ZNF302Q9NR11 478 aa8.82□□□□□ -1
CD44-211ENST00000442151 AAASQ9NRG9 546 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms