RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 ZSWIM3Q96MP5 696 aa6.81□□□□□ -1.32
PFDN4-202ENST00000441080 CLIC6Q96NY7 704 aa6.81□□□□□ -1.32
PFDN4-202ENST00000441080 BTBD7Q9P203 1132 aa6.81□□□□□ -1.32
PFDN4-202ENST00000441080 ASB1Q9Y576 335 aa6.81□□□□□ -1.32
PFDN4-202ENST00000441080 KCTD3Q9Y597 815 aa6.81□□□□□ -1.32
PFDN4-202ENST00000441080 PRAMEF22A3QJZ6 481 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 GPR39O43194 453 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 PLA2G1BP04054 148 aaKnown RBP6.8□□□□□ -1.32
PFDN4-202ENST00000441080 CDK11BP21127 795 aaKnown RBP6.8□□□□□ -1.32
PFDN4-202ENST00000441080 RAP1GAPP47736 663 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 CDKN1CP49918 316 aaPredicted RBP6.8□□□□□ -1.32
PFDN4-202ENST00000441080 ANAPC15P60006 121 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 ADAM9Q13443 819 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 SMAD4Q13485 552 aaKnown RBP6.8□□□□□ -1.32
PFDN4-202ENST00000441080 EPHA7Q15375 998 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 DDB1Q16531 1140 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 PRAMEF18Q5VWM3 479 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 ESRP1Q6NXG1 681 aaKnown RBP6.8□□□□□ -1.32
PFDN4-202ENST00000441080 LHFPL2Q6ZUX7 228 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 ZZZ3Q8IYH5 903 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 TTLL6Q8N841 843 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 LINC00482Q8N8I6 264 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 IGDCC4Q8TDY8 1250 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 SLC5A5Q92911 643 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 PWWP2AQ96N64 755 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 WRNIP1Q96S55 665 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 EPB41L4AQ9HCS5 686 aaPredicted RBP6.8□□□□□ -1.32
PFDN4-202ENST00000441080 ARHGAP20Q9P2F6 1191 aa6.8□□□□□ -1.32
PFDN4-202ENST00000441080 ULK1O75385 1050 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 LSP1P33241 339 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 THBS2P35442 1172 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 TXKP42681 527 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 LINC00310P59036 64 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 IGBP1P78318 339 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 HTRA3P83110 453 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 SMAD3P84022 425 aaKnown RBP6.79□□□□□ -1.32
PFDN4-202ENST00000441080 SMAD2Q15796 467 aaKnown RBP6.79□□□□□ -1.32
PFDN4-202ENST00000441080 KCNA10Q16322 511 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 ZNF385BQ569K4 471 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 RNF219Q5W0B1 726 aaPredicted RBP6.79□□□□□ -1.32
PFDN4-202ENST00000441080 HDGFL2Q7Z4V5 671 aaPredicted RBP6.79□□□□□ -1.32
PFDN4-202ENST00000441080 NME9Q86XW9 330 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 SPATS2Q86XZ4 545 aaKnown RBP6.79□□□□□ -1.32
PFDN4-202ENST00000441080 CILP2Q8IUL8 1156 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 PRPF38AQ8NAV1 312 aaKnown RBP6.79□□□□□ -1.32
PFDN4-202ENST00000441080 FNIP1Q8TF40 1166 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 E2F7Q96AV8 911 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 C16orf92Q96LL3 132 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 ZMAT4Q9H898 229 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 INCENPQ9NQS7 918 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 UCKL1Q9NWZ5 548 aa6.79□□□□□ -1.32
PFDN4-202ENST00000441080 NPIPB6E9PJ23 425 aa6.78□□□□□ -1.32
PFDN4-202ENST00000441080 GOLGA6L22H0YM25 854 aa6.78□□□□□ -1.32
PFDN4-202ENST00000441080 CD40P25942 277 aa6.78□□□□□ -1.32
PFDN4-202ENST00000441080 GLRBP48167 497 aa6.78□□□□□ -1.32
PFDN4-202ENST00000441080 PHC1P78364 1004 aa6.78□□□□□ -1.32
PFDN4-202ENST00000441080 LRRC32Q14392 662 aa6.78□□□□□ -1.32
PFDN4-202ENST00000441080 TERF2Q15554 542 aa6.78□□□□□ -1.32
PFDN4-202ENST00000441080 PHF19Q5T6S3 580 aa6.78□□□□□ -1.32
PFDN4-202ENST00000441080 GPR158Q5T848 1215 aa6.78□□□□□ -1.32
PFDN4-202ENST00000441080 BROXQ5VW32 411 aa6.78□□□□□ -1.32
PFDN4-202ENST00000441080 IQSEC1Q6DN90 963 aa6.78□□□□□ -1.32
PFDN4-202ENST00000441080 RTN4RL1Q86UN2 441 aaPredicted RBP6.78□□□□□ -1.32
PFDN4-202ENST00000441080 FOXRED1Q96CU9 486 aaPredicted RBP6.78□□□□□ -1.32
PFDN4-202ENST00000441080 KRTAP4-8Q9BYQ9 185 aa6.78□□□□□ -1.32
PFDN4-202ENST00000441080 ZFP69BQ9UJL9 534 aa6.78□□□□□ -1.32
PFDN4-202ENST00000441080 CROTQ9UKG9 612 aa6.78□□□□□ -1.32
PFDN4-202ENST00000441080 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.77□□□□□ -1.33
PFDN4-202ENST00000441080 UBA6A0AVT1 1052 aaPredicted RBP6.77□□□□□ -1.33
PFDN4-202ENST00000441080 CYP7B1O75881 506 aa6.77□□□□□ -1.33
PFDN4-202ENST00000441080 FBXO21O94952 628 aa6.77□□□□□ -1.33
PFDN4-202ENST00000441080 MPIG6BO95866 241 aa6.77□□□□□ -1.33
PFDN4-202ENST00000441080 SESN3P58005 492 aa6.77□□□□□ -1.33
PFDN4-202ENST00000441080 ADCY1Q08828 1119 aa6.77□□□□□ -1.33
PFDN4-202ENST00000441080 ZNF124Q15973 351 aa6.77□□□□□ -1.33
PFDN4-202ENST00000441080 C7orf31Q8N865 590 aa6.77□□□□□ -1.33
PFDN4-202ENST00000441080 ZNF610Q8N9Z0 462 aa6.77□□□□□ -1.33
PFDN4-202ENST00000441080 CALML6Q8TD86 181 aa6.77□□□□□ -1.33
PFDN4-202ENST00000441080 RTF1Q92541 710 aaKnown RBP6.77□□□□□ -1.33
PFDN4-202ENST00000441080 GALNT8Q9NY28 637 aa6.77□□□□□ -1.33
PFDN4-202ENST00000441080 RAB11FIP3O75154 756 aa6.76□□□□□ -1.33
PFDN4-202ENST00000441080 EVA1CP58658 441 aa6.76□□□□□ -1.33
PFDN4-202ENST00000441080 RTP5Q14D33 572 aa6.76□□□□□ -1.33
PFDN4-202ENST00000441080 TTC38Q5R3I4 469 aa6.76□□□□□ -1.33
PFDN4-202ENST00000441080 NECAB2Q7Z6G3 386 aa6.76□□□□□ -1.33
PFDN4-202ENST00000441080 STPG3Q8N7X2 389 aa6.76□□□□□ -1.33
PFDN4-202ENST00000441080 CLRN3Q8NCR9 226 aa6.76□□□□□ -1.33
PFDN4-202ENST00000441080 WDR48Q8TAF3 677 aa6.76□□□□□ -1.33
PFDN4-202ENST00000441080 FOXB1Q99853 325 aa6.76□□□□□ -1.33
PFDN4-202ENST00000441080 TACO1Q9BSH4 297 aaKnown RBP6.76□□□□□ -1.33
PFDN4-202ENST00000441080 AMNQ9BXJ7 453 aa6.76□□□□□ -1.33
PFDN4-202ENST00000441080 PHLDB1Q86UU1 1377 aa6.75□□□□□ -1.33
PFDN4-202ENST00000441080 ALG1L2C9J202 215 aa6.75□□□□□ -1.33
PFDN4-202ENST00000441080 IL18BPO95998 194 aa6.75□□□□□ -1.33
PFDN4-202ENST00000441080 PRLP01236 227 aa6.75□□□□□ -1.33
PFDN4-202ENST00000441080 C8AP07357 584 aa6.75□□□□□ -1.33
PFDN4-202ENST00000441080 ECE1P42892 770 aa6.75□□□□□ -1.33
PFDN4-202ENST00000441080 AFF3P51826 1226 aaKnown RBP6.75□□□□□ -1.33
PFDN4-202ENST00000441080 SLC6A3Q01959 620 aa6.75□□□□□ -1.33
PFDN4-202ENST00000441080 ALDH6A1Q02252 535 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms