RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 SLC30A9Q6PML9 568 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 TRPM8Q7Z2W7 1104 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 CCDC24Q8N4L8 307 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 CRNKL1Q9BZJ0 848 aaKnown RBP12.7□□□□□ -0.38
SMPD4-209ENST00000439886 ZMYND12Q9H0C1 365 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 TBK1Q9UHD2 729 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 ZBTB1Q9Y2K1 713 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 MEGF6O75095 1541 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 ORC4O43929 436 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 DRD4P21917 467 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 CHRNDQ07001 517 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 SLC18A3Q16572 532 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 CALCRLQ16602 461 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 RUBCNQ92622 972 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 LTN1O94822 1766 aa12.7□□□□□ -0.38
SMPD4-209ENST00000439886 EIF6P56537 245 aaKnown RBP12.69□□□□□ -0.38
SMPD4-209ENST00000439886 ADAM9Q13443 819 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 SETDB1Q15047 1291 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 ZNF662Q6ZS27 426 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 SLC44A5Q8NCS7 719 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 BAP1Q92560 729 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 FGFR1OP2Q9NVK5 253 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 DAAM1Q9Y4D1 1078 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 VPS41P49754 854 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 MXRA7P84157 204 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 PTK2Q05397 1052 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 CCT6BQ92526 530 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 INPP4AQ96PE3 977 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-209ENST00000439886 CCSER1Q9C0I3 900 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 IQCGQ9H095 443 aaKnown RBP12.69□□□□□ -0.38
SMPD4-209ENST00000439886 CHORDC1Q9UHD1 332 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-209ENST00000439886 SLC12A6Q9UHW9 1150 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 C15orf41Q9Y2V0 281 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 NPHP3-ACAD11A0A0J9YXS1 232 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 TCP11X1B4DZS4 312 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 TLR2O60603 784 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 H2AFZP0C0S5 128 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 SLC9A1P19634 815 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 CDK17Q00537 523 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 FKBP3Q00688 224 aaKnown RBP12.69□□□□□ -0.38
SMPD4-209ENST00000439886 FAM47EQ6ZV65 393 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 H2AFVQ71UI9 128 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 VSIG1Q86XK7 387 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 DZIP1Q86YF9 867 aaKnown RBP12.69□□□□□ -0.38
SMPD4-209ENST00000439886 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.69□□□□□ -0.381e-6■■■□□ 17.5
SMPD4-209ENST00000439886 C6orf50Q9HD87 102 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 AMFRQ9UKV5 643 aa12.69□□□□□ -0.38
SMPD4-209ENST00000439886 MED1Q15648 1581 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-209ENST00000439886 FOXO6A8MYZ6 492 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 KLRF2D3W0D1 207 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 GFPT2O94808 682 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 ACSL3O95573 720 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 ALDH5A1P51649 535 aaPredicted RBP12.68□□□□□ -0.38
SMPD4-209ENST00000439886 KCNMA1Q12791 1236 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 SLC29A2Q14542 456 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 FAM26FQ5R3K3 315 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 LRIG3Q6UXM1 1119 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 BZW1Q7L1Q6 419 aaKnown RBP12.68□□□□□ -0.38
SMPD4-209ENST00000439886 NEK8Q86SG6 692 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 CD302Q8IX05 232 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 NEK9Q8TD19 979 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 EPS8L3Q8TE67 593 aaKnown RBP12.68□□□□□ -0.38
SMPD4-209ENST00000439886 PLEKHG4BQ96PX9 1271 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 TMOD4Q9NZQ9 345 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 CEP72Q9P209 647 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 BCS1LQ9Y276 419 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 RIC1Q4ADV7 1423 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 USP17L2Q6R6M4 530 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 ERICH1Q86X53 443 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 VGLL2Q8N8G2 317 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 C4orf32Q8N8J7 132 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 HOOK2Q96ED9 719 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 PCDHB13Q9Y5F0 798 aa12.68□□□□□ -0.38
SMPD4-209ENST00000439886 F8VZ95 297 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 HIP1RO75146 1068 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 LGR5O75473 907 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 RTN3O95197 1032 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-209ENST00000439886 ERFP50548 548 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 PMS2P54278 862 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 DR1Q01658 176 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 XRCC4Q13426 336 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 FIGNQ5HY92 759 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 ACBD5Q5T8D3 534 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-209ENST00000439886 GJB7Q6PEY0 223 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 CTNNBL1Q8WYA6 563 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-209ENST00000439886 PHACTR1Q9C0D0 580 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 MTFR1LQ9H019 292 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMPD4-209ENST00000439886 SSU72P8A0A1W2PR75 194 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 CCDC169A6NNP5 214 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 F8W031 263 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-209ENST00000439886 ATP6V1G1O75348 118 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 MYL1P05976 194 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 IMPDH2P12268 514 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 ARHGAP44Q17R89 818 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 TMC3Q7Z5M5 1100 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 MREGQ8N565 214 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 COA7Q96BR5 231 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 PBKQ96KB5 322 aa12.67□□□□□ -0.38
SMPD4-209ENST00000439886 OSBPL1AQ9BXW6 950 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms