RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 MYL7Q01449 175 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 KRT76Q01546 638 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 RASSF7Q02833 373 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 RPS6KA1Q15418 735 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 STXBP2Q15833 593 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 H2AFVQ71UI9 128 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 PEX26Q7Z412 305 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 GMCL1Q96IK5 515 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 FHDC1Q9C0D6 1143 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 WNT10BO00744 389 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 TBX3O15119 743 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 SH2D3AQ9BRG2 576 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 GCNT4Q9P109 453 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 TMX2Q9Y320 296 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 CD2APQ9Y5K6 639 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 NPHP3-ACAD11A0A0J9YXS1 232 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 ENC1O14682 589 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 EIF4A3P38919 411 aaKnown RBP12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 JAK3P52333 1124 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 PPP2R5AQ15172 486 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 KNOP1Q1ED39 458 aaKnown RBP12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 C9orf131Q5VYM1 1079 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 CCDC50Q8IVM0 306 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 ELOA2Q8IYF1 753 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 TRIM6Q9C030 488 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 SLC5A4Q9NY91 659 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 MYO1AQ9UBC5 1043 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 TTC26A0AVF1 554 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 CD19P15391 556 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 INPP5BP32019 993 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 EPHA7Q15375 998 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 KSR1Q8IVT5 923 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 FAM133AQ8N9E0 248 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 NEK9Q8TD19 979 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 ZKSCAN4Q969J2 545 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 TEX13BQ9BXU2 312 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 ABHD10Q9NUJ1 306 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 EYA4O95677 639 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 NR3C1P04150 777 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 FGRP09769 529 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 KCNJ6P48051 423 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 NAALADL2Q58DX5 795 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 C8orf74Q6P047 294 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 HDXQ7Z353 690 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 AKT1S1Q96B36 256 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 NHEJ1Q9H9Q4 299 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 PDE11AQ9HCR9 933 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 C1orf112Q9NSG2 853 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 LRRN2O75325 713 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 FAM83AQ86UY5 434 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 GIMAP8Q8ND71 665 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 SLC17A8Q8NDX2 589 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 ATG4CQ96DT6 458 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 CEP63Q96MT8 703 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 PSMD1Q99460 953 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 LCMT1Q9UIC8 334 aa12.61□□□□□ -0.39
TRAPPC9-202ENST00000438773 H3BQF6 201 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 FKBP1AP62942 108 aaKnown RBP12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 TC2NQ8N9U0 490 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 MRIQ9BWK5 157 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 TACC3Q9Y6A5 838 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 A0A1B0GTH6 734 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 GOLGA8IPA6NC78 632 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 GOLGA8JA6NMD2 632 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 INO80B-WBP1J3KQ70 363 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 TRIM66O15016 1216 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 YY1P25490 414 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 PLCB3Q01970 1234 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 MAP2K1Q02750 393 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 NBPF12Q5TAG4 269 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 CCDC170Q8IYT3 715 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 OTUD6BQ8N6M0 293 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 PAF1Q8N7H5 531 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 UPF1Q92900 1129 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 INO80BQ9C086 356 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 GABBR1Q9UBS5 961 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 MRFAP1Q9Y605 127 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 C19orf81C9J6K1 198 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 HSF2BPO75031 334 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 IVLP07476 585 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 MARK3P27448 753 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 KCNH2Q12809 1159 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 APBB1IPQ7Z5R6 666 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 ELP3Q9H9T3 547 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 C5P01031 1676 aa12.6□□□□□ -0.39
TRAPPC9-202ENST00000438773 TULP2O00295 520 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 MAP3K9P80192 1104 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 CFAP221Q4G0U5 840 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 SWSAP1Q6NVH7 229 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 RBM46Q8TBY0 533 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 ADAMTS1Q9UHI8 967 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 BZW2Q9Y6E2 419 aaKnown RBP12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 AHDC1Q5TGY3 1603 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 PPP1R3GB7ZBB8 358 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 TAL1P17542 331 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 RPA1P27694 616 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 MXI1P50539 228 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 FUT2Q10981 343 aa12.59□□□□□ -0.39
TRAPPC9-202ENST00000438773 SEPT7Q16181 437 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms