RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 SMAD2Q15796 467 aaKnown RBP5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 DDB1Q16531 1140 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 CATSPEREQ5SY80 951 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 CREB3L3Q68CJ9 461 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 IQSEC1Q6DN90 963 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 OGFOD2Q6N063 350 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 TIGD7Q6NT04 549 aaPredicted RBP5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 CNKSR3Q6P9H4 555 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 TTLL7Q6ZT98 887 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 RASSF3Q86WH2 238 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 TMEM151BQ8IW70 566 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 ZNF610Q8N9Z0 462 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 ASB15Q8WXK1 588 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 SLC5A5Q92911 643 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 C16orf92Q96LL3 132 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 C11orf84Q9BUA3 381 aaPredicted RBP5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 GALNT8Q9NY28 637 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 USP36Q9P275 1121 aaKnown RBP5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 PLA2G2DQ9UNK4 145 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 SMG5Q9UPR3 1016 aaKnown RBP5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 PMF1-BGLAPU3KQ54 211 aa5.22□□□□□ -1.57
LSM1P1-201ENST00000438629 TGM5O43548 720 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 FBXO21O94952 628 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 MMEP08473 750 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 C1QTNF9P0C862 333 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 ITGA1P56199 1179 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 TERF2Q15554 542 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 TTC38Q5R3I4 469 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 TMC5Q6UXY8 1006 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 FRMD7Q6ZUT3 714 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 CXXC5Q7LFL8 322 aaKnown RBP5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 PROSER1Q86XN7 944 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 FAM129CQ86XR2 697 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 TMEFF1Q8IYR6 380 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 DTX3Q8N9I9 347 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 ZBTB8AQ96BR9 441 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 GPATCH3Q96I76 525 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 GORASP1Q9BQQ3 440 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 BTBD2Q9BX70 525 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 PUS7LQ9H0K6 701 aaKnown RBP5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 INCENPQ9NQS7 918 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 SLC5A4Q9NY91 659 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 H2AFY2Q9P0M6 372 aaPredicted RBP5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 ARHGAP20Q9P2F6 1191 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 NOC2LQ9Y3T9 749 aaKnown RBP5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 KCTD3Q9Y597 815 aa5.21□□□□□ -1.58
LSM1P1-201ENST00000438629 UBA6A0AVT1 1052 aaPredicted RBP5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 PRAMEF22A3QJZ6 481 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 ECE1P42892 770 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 LIMS1P48059 325 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 TMPRSS15P98073 1019 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 ROM1Q03395 351 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 KCNA10Q16322 511 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 SKIDA1Q1XH10 827 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 ZNF648Q5T619 568 aaPredicted RBP5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 BROXQ5VW32 411 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 PRAMEF18Q5VWM3 479 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 FSTL4Q6MZW2 842 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 LIPIQ6XZB0 460 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 PHYKPLQ8IUZ5 450 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 PRPF38AQ8NAV1 312 aaKnown RBP5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 ERCC4Q92889 916 aaPredicted RBP5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 PWWP2AQ96N64 755 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 PUS7Q96PZ0 661 aaKnown RBP5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 FOXB1Q99853 325 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 SLC39A2Q9NP94 309 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 CD320Q9NPF0 282 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 HOMER2Q9NSB8 354 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 TYW1Q9NV66 732 aaKnown RBP5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 BTBD7Q9P203 1132 aa5.2□□□□□ -1.58
LSM1P1-201ENST00000438629 RASSF10A6NK89 507 aa5.19□□□□□ -1.58
LSM1P1-201ENST00000438629 PTX3P26022 381 aaPredicted RBP5.19□□□□□ -1.58
LSM1P1-201ENST00000438629 ID4P47928 161 aa5.19□□□□□ -1.58
LSM1P1-201ENST00000438629 GUCY2FP51841 1108 aa5.19□□□□□ -1.58
LSM1P1-201ENST00000438629 HTRA3P83110 453 aa5.19□□□□□ -1.58
LSM1P1-201ENST00000438629 ADAM9Q13443 819 aa5.19□□□□□ -1.58
LSM1P1-201ENST00000438629 HDGFL2Q7Z4V5 671 aaPredicted RBP5.19□□□□□ -1.58
LSM1P1-201ENST00000438629 CILP2Q8IUL8 1156 aa5.19□□□□□ -1.58
LSM1P1-201ENST00000438629 C7orf31Q8N865 590 aa5.19□□□□□ -1.58
LSM1P1-201ENST00000438629 FNIP1Q8TF40 1166 aa5.19□□□□□ -1.58
LSM1P1-201ENST00000438629 MAML3Q96JK9 1138 aa5.19□□□□□ -1.58
LSM1P1-201ENST00000438629 TUBGCP5Q96RT8 1024 aa5.19□□□□□ -1.58
LSM1P1-201ENST00000438629 ZDHHC5Q9C0B5 715 aa5.19□□□□□ -1.58
LSM1P1-201ENST00000438629 ZMAT4Q9H898 229 aa5.19□□□□□ -1.58
LSM1P1-201ENST00000438629 UCKL1Q9NWZ5 548 aa5.19□□□□□ -1.58
LSM1P1-201ENST00000438629 KRT1P04264 644 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 PI3P19957 117 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 THBS2P35442 1172 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 GLRBP48167 497 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 BCAR1P56945 870 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 LINC00310P59036 64 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 ALDH6A1Q02252 535 aaKnown RBP5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 SSPNQ14714 243 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 CIAPIN1Q6FI81 312 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 ESPNLQ6ZVH7 1005 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 SAPCD2Q86UD0 394 aa5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 RTN4RL1Q86UN2 441 aaPredicted RBP5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 RPGRQ92834 1020 aaKnown RBP5.18□□□□□ -1.58
LSM1P1-201ENST00000438629 FOXRED1Q96CU9 486 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms