RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 SFR1Q86XK3 245 aa12.05□□□□□ -0.48
SEMA4D-211ENST00000438547 SH3RF3Q8TEJ3 882 aaPredicted RBP12.05□□□□□ -0.48
SEMA4D-211ENST00000438547 ATP6V1G3Q96LB4 118 aa12.05□□□□□ -0.48
SEMA4D-211ENST00000438547 USP17L5A8MUK1 530 aa12.05□□□□□ -0.48
SEMA4D-211ENST00000438547 GPC4O75487 556 aa12.05□□□□□ -0.48
SEMA4D-211ENST00000438547 KCNB1Q14721 858 aa12.05□□□□□ -0.48
SEMA4D-211ENST00000438547 NR1I3Q14994 352 aa12.05□□□□□ -0.48
SEMA4D-211ENST00000438547 TC2NQ8N9U0 490 aa12.05□□□□□ -0.48
SEMA4D-211ENST00000438547 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.05□□□□□ -0.48
SEMA4D-211ENST00000438547 HOXA13P31271 388 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 FXR1P51114 621 aaKnown RBP eCLIP12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 STAT2P52630 851 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 BEND6Q5SZJ8 279 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 EDEM3Q9BZQ6 932 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 PI4KBQ9UBF8 816 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 ADD3Q9UEY8 706 aaKnown RBP12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 UNC13BO14795 1591 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 GOLGA8IPA6NC78 632 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 GOLGA8JA6NMD2 632 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 ESRRAP11474 423 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 ALCAMQ13740 583 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 HSP90AA5PQ58FG0 334 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 NYAP1Q6ZVC0 841 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 SRLQ86TD4 932 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 LRRC1Q9BTT6 524 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 SCOCQ9UIL1 159 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 USP21Q9UK80 565 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 SNX12Q9UMY4 172 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 TAF6LQ9Y6J9 622 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 CPP00450 1065 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 CENPUQ71F23 418 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 PDIK1LQ8N165 341 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 PIGOQ8TEQ8 1089 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 CALN1Q9BXU9 219 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 VIPAS39Q9H9C1 493 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 IFT122Q9HBG6 1241 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 BARHL2Q9NY43 387 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 PACSIN2Q9UNF0 486 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 PPEF1O14829 653 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 SERPINB2P05120 415 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 ZSCAN20P17040 1043 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 KCNQ4P56696 695 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 GABPAQ06546 454 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 AP3B2Q13367 1082 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 ORC2Q13416 577 aaPredicted RBP12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 GRM4Q14833 912 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 CC2D2BQ6DHV5 1058 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 RAD9BQ6WBX8 426 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 TMC4Q7Z404 712 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 PYROXD1Q8WU10 500 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 HVCN1Q96D96 273 aa12.04□□□□□ -0.48
SEMA4D-211ENST00000438547 FCER1AP12319 257 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 GPC5P78333 572 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 HDLBPQ00341 1268 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 SPARCL1Q14515 664 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 TBC1D9BQ66K14 1250 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 ANKRD40Q6AI12 368 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 TMED8Q6PL24 325 aaPredicted RBP12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 SLC44A5Q8NCS7 719 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 PAGR1Q9BTK6 254 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 NOD1Q9Y239 953 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 HECW2Q9P2P5 1572 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 PMS2P54278 862 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 MMEL1Q495T6 779 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 DCAF15Q66K64 600 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 CLEC4GQ6UXB4 293 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 ENGASEQ8NFI3 743 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 NLRP7Q8WX94 980 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 MINPP1Q9UNW1 487 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 CPDO75976 1380 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 RNF17Q9BXT8 1623 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 CLRN2A0PK11 232 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 ZBTB5O15062 677 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 ZWINTO95229 277 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 FDPSP14324 419 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 DARS2Q6PI48 645 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 FAM47EQ6ZV65 393 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 MED10Q9BTT4 135 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 CNOT8Q9UFF9 292 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 A2ML1A8K2U0 1454 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 GSTA1P08263 222 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 GSTA2P09210 222 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 PLS3P13797 630 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 ZNF211Q13398 564 aaPredicted RBP12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 PDE1CQ14123 709 aaPredicted RBP12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 KNOP1Q1ED39 458 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 FAM160B1Q5W0V3 765 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 PDXDC1Q6P996 788 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 FAM196AQ6ZSG2 479 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 RNF168Q8IYW5 571 aaPredicted RBP12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 IGDCC4Q8TDY8 1250 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 THOC1Q96FV9 657 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 TMEM260Q9NX78 707 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 ANAPC7Q9UJX3 599 aa12.03□□□□□ -0.48
SEMA4D-211ENST00000438547 NRKQ7Z2Y5 1582 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 POTEB3A0JP26 581 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 POTECB2RU33 542 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 USP17L15C9J2P7 530 aa12.02□□□□□ -0.48
SEMA4D-211ENST00000438547 USP17L13C9JLJ4 530 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms