RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 KRT79Q5XKE5 535 aa16.32■□□□□ 0.2
TOP3B-206ENST00000436282 TAX1BP1Q86VP1 789 aa16.32■□□□□ 0.2
TOP3B-206ENST00000436282 CERKQ8TCT0 537 aa16.32■□□□□ 0.2
TOP3B-206ENST00000436282 RAPGEF5Q92565 580 aa16.32■□□□□ 0.2
TOP3B-206ENST00000436282 MXD3Q9BW11 206 aa16.32■□□□□ 0.2
TOP3B-206ENST00000436282 GANQ9H2C0 597 aa16.32■□□□□ 0.2
TOP3B-206ENST00000436282 CNOT8Q9UFF9 292 aaKnown RBP16.32■□□□□ 0.2
TOP3B-206ENST00000436282 SNED1Q8TER0 1413 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 NF2P35240 595 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 PSEN1P49768 467 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 BYSLQ13895 437 aaKnown RBP16.31■□□□□ 0.2
TOP3B-206ENST00000436282 SEPT2Q15019 361 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 KCNK18Q7Z418 384 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 TATDN2Q93075 761 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 TMEM260Q9NX78 707 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 NOVA2Q9UNW9 492 aaKnown RBP16.31■□□□□ 0.2
TOP3B-206ENST00000436282 DAGLAQ9Y4D2 1042 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 AFF2P51816 1311 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 ESYT2A0FGR8 921 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 POTEMA6NI47 508 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 ENOX2Q16206 610 aaKnown RBP16.31■□□□□ 0.2
TOP3B-206ENST00000436282 FAM26FQ5R3K3 315 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 SLF2Q8IX21 1173 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 LRRC57Q8N9N7 239 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 COA7Q96BR5 231 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 DNAJC19Q96DA6 116 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.31■□□□□ 0.28e-9■■□□□ 12.6
TOP3B-206ENST00000436282 GPCPD1Q9NPB8 672 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 HAUS2Q9NVX0 235 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 SUFUQ9UMX1 484 aa16.31■□□□□ 0.2
TOP3B-206ENST00000436282 NOC2LQ9Y3T9 749 aaKnown RBP16.31■□□□□ 0.2
TOP3B-206ENST00000436282 KIF13BQ9NQT8 1826 aa16.3■□□□□ 0.2
TOP3B-206ENST00000436282 SCTRP47872 440 aa16.3■□□□□ 0.2
TOP3B-206ENST00000436282 GKAP1Q5VSY0 366 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-206ENST00000436282 NUDT12Q9BQG2 462 aa16.3■□□□□ 0.2
TOP3B-206ENST00000436282 AP1M1Q9BXS5 423 aa16.3■□□□□ 0.2
TOP3B-206ENST00000436282 ODF2LQ9ULJ1 636 aa16.3■□□□□ 0.2
TOP3B-206ENST00000436282 SLC37A4O43826 429 aa16.3■□□□□ 0.2
TOP3B-206ENST00000436282 ZBTB48P10074 688 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-206ENST00000436282 SCNN1DP51172 638 aa16.3■□□□□ 0.2
TOP3B-206ENST00000436282 XRCC4Q13426 336 aa16.3■□□□□ 0.2
TOP3B-206ENST00000436282 TMC3Q7Z5M5 1100 aa16.3■□□□□ 0.2
TOP3B-206ENST00000436282 TBC1D22AQ8WUA7 517 aa16.3■□□□□ 0.2
TOP3B-206ENST00000436282 DDX47Q9H0S4 455 aaKnown RBP16.3■□□□□ 0.2
TOP3B-206ENST00000436282 MYH7BA7E2Y1 1941 aa16.3■□□□□ 0.2
TOP3B-206ENST00000436282 NHSQ6T4R5 1651 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 TRIM37O94972 964 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 FLT3P36888 993 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 IFFO1Q0D2I5 559 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 DOK7Q18PE1 504 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 DPP8Q6V1X1 898 aaPredicted RBP16.29■□□□□ 0.2
TOP3B-206ENST00000436282 FAM228AQ86W67 206 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 METTL13Q8N6R0 699 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 SLITRK6Q9H5Y7 841 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 PANK4Q9NVE7 773 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 SLURP2P0DP57 97 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 GHRP10912 638 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 PDHBP11177 359 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 SMARCA1P28370 1054 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 MAGOHP61326 146 aaKnown RBP16.29■□□□□ 0.2
TOP3B-206ENST00000436282 PPARDQ03181 441 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 PTK2Q05397 1052 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 MAGOHBQ96A72 148 aaKnown RBP16.29■□□□□ 0.2
TOP3B-206ENST00000436282 GOLPH3Q9H4A6 298 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 SWAP70Q9UH65 585 aa16.29■□□□□ 0.2
TOP3B-206ENST00000436282 TPX2Q9ULW0 747 aaKnown RBP16.29■□□□□ 0.2
TOP3B-206ENST00000436282 KRIT1O00522 736 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 DAPK3O43293 454 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 TDP2O95551 362 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 AKR1B1P15121 316 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 EPS15P42566 896 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 SBF2Q86WG5 1849 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 NAV1Q8NEY1 1877 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 SEC14L1Q92503 715 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 N4BP2L2Q92802 583 aaPredicted RBP16.28■□□□□ 0.2
TOP3B-206ENST00000436282 KDM4CQ9H3R0 1056 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 CNOT10Q9H9A5 744 aaKnown RBP16.28■□□□□ 0.2
TOP3B-206ENST00000436282 RAD21O60216 631 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 DNAJC8O75937 253 aaPredicted RBP16.28■□□□□ 0.2
TOP3B-206ENST00000436282 KRT71Q3SY84 523 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 ZNF571Q7Z3V5 609 aaPredicted RBP16.28■□□□□ 0.2
TOP3B-206ENST00000436282 IRF2BP2Q7Z5L9 587 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 CPLX4Q7Z7G2 160 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 CEP57Q86XR8 500 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 RASGEF1CQ8N431 466 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 CCDC26Q8TAB7 109 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 CCT6BQ92526 530 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 PSMD1Q99460 953 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 KANSL2Q9H9L4 492 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 VEZTQ9HBM0 779 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 BZW2Q9Y6E2 419 aaKnown RBP16.28■□□□□ 0.2
TOP3B-206ENST00000436282 F8VZ95 297 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 PPEF1O14829 653 aaPredicted RBP16.28■□□□□ 0.2
TOP3B-206ENST00000436282 DRD4P21917 467 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 TPCN2Q8NHX9 752 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 AMACRQ9UHK6 382 aa16.28■□□□□ 0.2
TOP3B-206ENST00000436282 GAKO14976 1311 aa16.27■□□□□ 0.2
TOP3B-206ENST00000436282 ATP8B3O60423 1300 aa16.27■□□□□ 0.2
TOP3B-206ENST00000436282 SPATA31A6Q5VVP1 1343 aa16.27■□□□□ 0.2
TOP3B-206ENST00000436282 DCDC2CA8MYV0 355 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms