RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 ATG2AQ2TAZ0 1938 aa14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 CCDC196A0A1B0GTZ2 297 aa14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 DHX15O43143 795 aaKnown RBP14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 COL9A1P20849 921 aa14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 TMEM266Q2M3C6 531 aa14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 IER5Q5VY09 327 aa14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 MTHFD1LQ6UB35 978 aa14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 ABHD15Q6UXT9 468 aa14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 RTN4RL1Q86UN2 441 aaPredicted RBP14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 REXO1Q8N1G1 1221 aaKnown RBP14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 CRYGNQ8WXF5 182 aa14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 ZMYND12Q9H0C1 365 aa14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 GLT8D2Q9H1C3 349 aa14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 NCOA5Q9HCD5 579 aaKnown RBP14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 PADI3Q9ULW8 664 aa14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 GINS2Q9Y248 185 aa14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 PCDHA2Q9Y5H9 948 aa14.9□□□□□ -0.02
CDCA4P4-201ENST00000435216 IGKV6D-21A0A0A0MT36 114 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 M0QZ92 97 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 IPO5O00410 1097 aaKnown RBP14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 PRPF3O43395 683 aaKnown RBP14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 LINC00271P0C7V0 271 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 KLRC1P26715 233 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 CCT2P78371 535 aaKnown RBP14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 BTG3Q14201 252 aaPredicted RBP14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 PTPROQ16827 1216 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 TCEAL5Q5H9L2 206 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 SWSAP1Q6NVH7 229 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 PDXDC2PQ6P474 469 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 EP400NLQ6ZTU2 488 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 NIPA1Q7RTP0 329 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 TEX2Q8IWB9 1127 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 BANK1Q8NDB2 785 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 KHSRPQ92945 711 aaKnown RBP eCLIP14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 PPP1R16BQ96T49 567 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 ZNF577Q9BSK1 485 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 CELF4Q9BZC1 486 aaKnown RBP14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 CDHR5Q9HBB8 845 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 RC3H2Q9HBD1 1191 aaKnown RBP14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 C6orf50Q9HD87 102 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 ZNF302Q9NR11 478 aa14.89□□□□□ -0.03
CDCA4P4-201ENST00000435216 TTC3P53804 2025 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 NID2Q14112 1375 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 KIAA1671Q9BY89 1806 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 SMIM35A0A1B0GVV1 85 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 ESYT2A0FGR8 921 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 H3BQ06 376 aaPredicted RBP14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 GRM6O15303 877 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 CYP3A4P08684 503 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 ATP4AP20648 1035 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 BMPR1AP36894 532 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 GATMP50440 423 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 KRT76Q01546 638 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 PAK2Q13177 524 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 NTRK3Q16288 839 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 PAN2Q504Q3 1202 aaKnown RBP14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 PRR16Q569H4 304 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 FAM160B1Q5W0V3 765 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 ATP8B4Q8TF62 1192 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 TNPO1Q92973 898 aaKnown RBP14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 ZNF689Q96CS4 500 aaPredicted RBP14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 LARP6Q9BRS8 491 aaKnown RBP14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 SLC26A6Q9BXS9 759 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 EPHX3Q9H6B9 360 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 CD320Q9NPF0 282 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 VPS54Q9P1Q0 977 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 IGSF9BQ9UPX0 1349 aa14.88□□□□□ -0.03
CDCA4P4-201ENST00000435216 EVPLQ92817 2033 aa14.87□□□□□ -0.03
CDCA4P4-201ENST00000435216 ZBTB42B2RXF5 422 aa14.87□□□□□ -0.03
CDCA4P4-201ENST00000435216 HBP1O60381 514 aa14.87□□□□□ -0.03
CDCA4P4-201ENST00000435216 DGKIO75912 1065 aa14.87□□□□□ -0.03
CDCA4P4-201ENST00000435216 IL9P15248 144 aa14.87□□□□□ -0.03
CDCA4P4-201ENST00000435216 PDIA3P30101 505 aaKnown RBP14.87□□□□□ -0.03
CDCA4P4-201ENST00000435216 SLC26A2P50443 739 aa14.87□□□□□ -0.03
CDCA4P4-201ENST00000435216 AKAP17AQ02040 695 aaKnown RBP14.87□□□□□ -0.03
CDCA4P4-201ENST00000435216 TIGD5Q53EQ6 642 aa14.87□□□□□ -0.03
CDCA4P4-201ENST00000435216 MIS18BP1Q6P0N0 1132 aa14.87□□□□□ -0.03
CDCA4P4-201ENST00000435216 CKAP2LQ8IYA6 745 aa14.87□□□□□ -0.03
CDCA4P4-201ENST00000435216 CCDC12Q8WUD4 166 aaPredicted RBP14.87□□□□□ -0.03
CDCA4P4-201ENST00000435216 AGXT2Q9BYV1 514 aa14.87□□□□□ -0.03
CDCA4P4-201ENST00000435216 TMX1Q9H3N1 280 aa14.87□□□□□ -0.03
CDCA4P4-201ENST00000435216 MRPL42Q9Y6G3 142 aaKnown RBP14.87□□□□□ -0.03
CDCA4P4-201ENST00000435216 MYO7AQ13402 2215 aa14.86□□□□□ -0.03
CDCA4P4-201ENST00000435216 REC8O95072 547 aa14.86□□□□□ -0.03
CDCA4P4-201ENST00000435216 RPLP2P05387 115 aaKnown RBP14.86□□□□□ -0.03
CDCA4P4-201ENST00000435216 PSMA5P28066 241 aa14.86□□□□□ -0.03
CDCA4P4-201ENST00000435216 GNA11P29992 359 aa14.86□□□□□ -0.03
CDCA4P4-201ENST00000435216 NFX1Q12986 1120 aaKnown RBP14.86□□□□□ -0.03
CDCA4P4-201ENST00000435216 LEXMQ3ZCV2 418 aa14.86□□□□□ -0.03
CDCA4P4-201ENST00000435216 KIAA0319LQ8IZA0 1049 aa14.86□□□□□ -0.03
CDCA4P4-201ENST00000435216 TMEM40Q8WWA1 233 aa14.86□□□□□ -0.03
CDCA4P4-201ENST00000435216 FTHL17Q9BXU8 183 aa14.86□□□□□ -0.03
CDCA4P4-201ENST00000435216 RNF26Q9BY78 433 aaPredicted RBP14.86□□□□□ -0.03
CDCA4P4-201ENST00000435216 NSUN3Q9H649 340 aaKnown RBP14.86□□□□□ -0.03
CDCA4P4-201ENST00000435216 ALG13Q9NP73 1137 aaKnown RBP14.86□□□□□ -0.03
CDCA4P4-201ENST00000435216 TBC1D22BQ9NU19 505 aa14.86□□□□□ -0.03
CDCA4P4-201ENST00000435216 NOC2LQ9Y3T9 749 aaKnown RBP14.86□□□□□ -0.03
CDCA4P4-201ENST00000435216 SQORQ9Y6N5 450 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms