RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 CASP4P49662 377 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 SYT2Q8N9I0 419 aaPredicted RBP13.34□□□□□ -0.27
CLDN4-203ENST00000435050 U2AF1L4Q8WU68 220 aaKnown RBP13.34□□□□□ -0.27
CLDN4-203ENST00000435050 WDR18Q9BV38 432 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 TSGA10Q9BZW7 698 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 LRRC10BA6NIK2 292 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 TBX3O15119 743 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 EPHB6O15197 1021 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 WDR46O15213 610 aaKnown RBP13.34□□□□□ -0.27
CLDN4-203ENST00000435050 GFPT2O94808 682 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 SLC9A1P19634 815 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 CLK2P49760 499 aaKnown RBP13.34□□□□□ -0.27
CLDN4-203ENST00000435050 IRX3P78415 501 aaPredicted RBP13.34□□□□□ -0.27
CLDN4-203ENST00000435050 CKAP4Q07065 602 aaKnown RBP13.34□□□□□ -0.27
CLDN4-203ENST00000435050 RINT1Q6NUQ1 792 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 CEP170P1Q96L14 293 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 NOX5Q96PH1 765 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 RUFY1Q96T51 708 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 P2RX7Q99572 595 aaKnown RBP13.34□□□□□ -0.27
CLDN4-203ENST00000435050 PARD6BQ9BYG5 372 aa13.34□□□□□ -0.27
CLDN4-203ENST00000435050 HIP1RO75146 1068 aa13.33□□□□□ -0.27
CLDN4-203ENST00000435050 PLA2G4FQ68DD2 849 aa13.33□□□□□ -0.27
CLDN4-203ENST00000435050 FAM83AQ86UY5 434 aa13.33□□□□□ -0.27
CLDN4-203ENST00000435050 SEPT9Q9UHD8 586 aaPredicted RBP13.33□□□□□ -0.27
CLDN4-203ENST00000435050 MYH1P12882 1939 aa13.33□□□□□ -0.28
CLDN4-203ENST00000435050 LAMB2P55268 1798 aa13.33□□□□□ -0.28
CLDN4-203ENST00000435050 PNMA6AP0CW24 399 aaPredicted RBP13.33□□□□□ -0.28
CLDN4-203ENST00000435050 GAP43P17677 238 aa13.33□□□□□ -0.28
CLDN4-203ENST00000435050 VCAM1P19320 739 aa13.33□□□□□ -0.28
CLDN4-203ENST00000435050 SMTNP53814 917 aa13.33□□□□□ -0.28
CLDN4-203ENST00000435050 NPEPPSP55786 919 aa13.33□□□□□ -0.28
CLDN4-203ENST00000435050 LACRTQ9GZZ8 138 aa13.33□□□□□ -0.28
CLDN4-203ENST00000435050 MRFAP1Q9Y605 127 aa13.33□□□□□ -0.28
CLDN4-203ENST00000435050 SLC16A4O15374 487 aa13.33□□□□□ -0.28
CLDN4-203ENST00000435050 FTCDO95954 541 aa13.33□□□□□ -0.28
CLDN4-203ENST00000435050 ATP1A1P05023 1023 aaKnown RBP13.33□□□□□ -0.28
CLDN4-203ENST00000435050 PSMC2P35998 433 aaKnown RBP13.33□□□□□ -0.28
CLDN4-203ENST00000435050 MUM1L1Q5H9M0 696 aa13.33□□□□□ -0.28
CLDN4-203ENST00000435050 DNAAF5Q86Y56 855 aa13.33□□□□□ -0.28
CLDN4-203ENST00000435050 MXRA8Q9BRK3 442 aa13.33□□□□□ -0.28
CLDN4-203ENST00000435050 OGFRQ9NZT2 677 aa13.33□□□□□ -0.28
CLDN4-203ENST00000435050 DLATP10515 647 aaKnown RBP13.32□□□□□ -0.28
CLDN4-203ENST00000435050 SETQ01105 290 aaPredicted RBP13.32□□□□□ -0.28
CLDN4-203ENST00000435050 IL31RAQ8NI17 732 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 DCPSQ96C86 337 aaKnown RBP13.32□□□□□ -0.28
CLDN4-203ENST00000435050 MTFR1LQ9H019 292 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 PBX1P40424 430 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 VAV2P52735 878 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 TGFB2P61812 414 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 MKRN3Q13064 507 aaKnown RBP13.32□□□□□ -0.28
CLDN4-203ENST00000435050 CCDC170Q8IYT3 715 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 GPR161Q8N6U8 529 aaKnown RBP13.32□□□□□ -0.28
CLDN4-203ENST00000435050 ETNPPLQ8TBG4 499 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 CEP63Q96MT8 703 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 METTL14Q9HCE5 456 aaKnown RBP13.32□□□□□ -0.28
CLDN4-203ENST00000435050 NCK2O43639 380 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 TADA3O75528 432 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 ICAM1P05362 532 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 EPHA7Q15375 998 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 MTERF2Q49AM1 385 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 Q4G0T1 1027 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 DLK2Q6UY11 383 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 ACBD3Q9H3P7 528 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 CENPHQ9H3R5 247 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 FAM184BQ9ULE4 1060 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 SSR1P43307 286 aaKnown RBP13.32□□□□□ -0.28
CLDN4-203ENST00000435050 EHHADHQ08426 723 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 GJB7Q6PEY0 223 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 ZNF280CQ8ND82 737 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 ANKRD7Q92527 254 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 MTMR8Q96EF0 704 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 GPRC5CQ9NQ84 441 aa13.32□□□□□ -0.28
CLDN4-203ENST00000435050 TYW1Q9NV66 732 aaKnown RBP13.32□□□□□ -0.28
CLDN4-203ENST00000435050 NAV1Q8NEY1 1877 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 ZNF185O15231 689 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 NF2P35240 595 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 HLTFQ14527 1009 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLDN4-203ENST00000435050 COG2Q14746 738 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 OTOP1Q7RTM1 612 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 TRIM58Q8NG06 486 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 LPAR1Q92633 364 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 L2HGDHQ9H9P8 463 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 NPM3O75607 178 aaKnown RBP13.31□□□□□ -0.28
CLDN4-203ENST00000435050 SLITRK3O94933 977 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 P4HBP07237 508 aaKnown RBP13.31□□□□□ -0.28
CLDN4-203ENST00000435050 SPATA31C1P0DKV0 1188 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 TNFAIP3P21580 790 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 STAT1P42224 750 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 QARSP47897 775 aaKnown RBP13.31□□□□□ -0.28
CLDN4-203ENST00000435050 SLC12A3P55017 1021 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 MAP3K9P80192 1104 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 SUPT20HL1Q3ZLR7 823 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 MIIPQ5JXC2 388 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 TAF3Q5VWG9 929 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 ZNF507Q8TCN5 953 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 ERGIC2Q96RQ1 377 aa13.31□□□□□ -0.28
CLDN4-203ENST00000435050 RGS17Q9UGC6 210 aaPredicted RBP13.31□□□□□ -0.28
CLDN4-203ENST00000435050 CTNND1O60716 968 aaKnown RBP13.31□□□□□ -0.28
CLDN4-203ENST00000435050 EIF3JO75822 258 aaKnown RBP13.31□□□□□ -0.28
CLDN4-203ENST00000435050 BIRC3Q13489 604 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms