RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 FLAD1Q8NFF5 587 aa8.06□□□□□ -1.12
SYNPO2-203ENST00000434046 ZNF483Q8TF39 744 aaPredicted RBP8.06□□□□□ -1.12
SYNPO2-203ENST00000434046 TATDN2Q93075 761 aa8.06□□□□□ -1.12
SYNPO2-203ENST00000434046 MTRQ99707 1265 aa8.06□□□□□ -1.12
SYNPO2-203ENST00000434046 PRMT1Q99873 361 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-203ENST00000434046 LBHD1Q9BQE6 289 aaPredicted RBP8.06□□□□□ -1.12
SYNPO2-203ENST00000434046 CELF4Q9BZC1 486 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-203ENST00000434046 TRIM7Q9C029 511 aa8.06□□□□□ -1.12
SYNPO2-203ENST00000434046 UBA5Q9GZZ9 404 aa8.06□□□□□ -1.12
SYNPO2-203ENST00000434046 AZI2Q9H6S1 392 aa8.06□□□□□ -1.12
SYNPO2-203ENST00000434046 PANK4Q9NVE7 773 aa8.06□□□□□ -1.12
SYNPO2-203ENST00000434046 CNOT8Q9UFF9 292 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-203ENST00000434046 SALL4Q9UJQ4 1053 aa8.06□□□□□ -1.12
SYNPO2-203ENST00000434046 TRPM3Q9HCF6 1732 aaPredicted RBP8.06□□□□□ -1.12
SYNPO2-203ENST00000434046 PARP4Q9UKK3 1724 aaKnown RBP8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 TTI1O43156 1089 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 TECP42680 631 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 TXKP42681 527 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 NUGGCQ68CJ6 796 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 LRIG3Q6UXM1 1119 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 SV2BQ7L1I2 683 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 KRT25Q7Z3Z0 450 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 DGKHQ86XP1 1220 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 PHF20Q9BVI0 1012 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 TRIM4Q9C037 500 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 STK32BQ9NY57 414 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 HDAC9Q9UKV0 1011 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 ALS2Q96Q42 1657 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 SCN11AQ9UI33 1791 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 WTIPA6NIX2 430 aaPredicted RBP8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 CCDC169A6NNP5 214 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 TMEM110-MUSTN1A8MSY1 372 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 SUN1O94901 812 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 UBOX5O94941 541 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 MMP10P09238 476 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 ATP2A2P16615 1042 aaKnown RBP8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 HSPA9P38646 679 aaKnown RBP8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 CTCFP49711 727 aaPredicted RBP8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 KCNJ2P63252 427 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 GPSM2P81274 684 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 XRCC4Q13426 336 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 TXNRD1Q16881 649 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 ARMC3Q5W041 872 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 KRT79Q5XKE5 535 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 REXO1Q8N1G1 1221 aaKnown RBP8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 RNF10Q8N5U6 811 aaKnown RBP8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 USP38Q8NB14 1042 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 GDAP1Q8TB36 358 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 TRIM51Q9BSJ1 452 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 ISCUQ9H1K1 167 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 KDM4CQ9H3R0 1056 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 ETAA1Q9NY74 926 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 FRMPD2Q68DX3 1309 aaPredicted RBP8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 CFAP73A6NFT4 308 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 ORC4O43929 436 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 CAND2O75155 1236 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 RANBP1P43487 201 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 RCAN1P53805 252 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 SLMAPQ14BN4 828 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 MUM1Q2TAK8 710 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 RPUSD2Q8IZ73 545 aaKnown RBP8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 DBNDD1Q9H9R9 158 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 GGA2Q9UJY4 613 aa8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 G3BP2Q9UN86 482 aaKnown RBP8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 PHRF1Q9P1Y6 1649 aaKnown RBP8.05□□□□□ -1.12
SYNPO2-203ENST00000434046 GNAT1P11488 350 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 TSNAXIP1Q2TAA8 658 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 USP17L2Q6R6M4 530 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 C6orf89Q6UWU4 347 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 TXNRD3Q86VQ6 643 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 SPICE1Q8N0Z3 855 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 PACSIN1Q9BY11 444 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 ZMYND12Q9H0C1 365 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 ABCF3Q9NUQ8 709 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 SNX24Q9Y343 169 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 NOC2LQ9Y3T9 749 aaKnown RBP8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 LRP6O75581 1613 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 KCPQ6ZWJ8 1503 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 DNAJC8O75937 253 aaPredicted RBP8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 NQO1P15559 274 aaKnown RBP8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 ABCB4P21439 1286 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 CDK8P49336 464 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 ALDH5A1P51649 535 aaPredicted RBP8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 LLGL1Q15334 1064 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 ADGRA1Q86SQ6 560 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 CD302Q8IX05 232 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 GIMAP8Q8ND71 665 aaPredicted RBP8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 NEK9Q8TD19 979 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 IQCDQ96DY2 449 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 DUSP9Q99956 384 aaKnown RBP8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 DDX23Q9BUQ8 820 aaKnown RBP8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 BIN2Q9UBW5 565 aaPredicted RBP8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 MTRF1LQ9UGC7 380 aaKnown RBP8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 GSTTP1A0A1W2PQM5 241 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 GRID2IPA4D2P6 1211 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 MGRN1O60291 552 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 SERPING1P05155 500 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 DRD4P21917 467 aa8.04□□□□□ -1.12
SYNPO2-203ENST00000434046 FLT3P36888 993 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms