RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 GRIK4Q16099 956 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 RASIP1Q5U651 963 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 ZNF746Q6NUN9 644 aaPredicted RBP16.08■□□□□ 0.16
LAMA4-208ENST00000431543 RUFY4Q6ZNE9 571 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 LRRC8DQ7L1W4 858 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 RPUSD2Q8IZ73 545 aaKnown RBP16.08■□□□□ 0.16
LAMA4-208ENST00000431543 CCDC155Q8N6L0 562 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 ETNPPLQ8TBG4 499 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 AFAP1L1Q8TED9 768 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 TRAPPC12Q8WVT3 735 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 RIT2Q99578 217 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 OSBPL7Q9BZF2 842 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 SCAND2PQ9GZW5 306 aaPredicted RBP16.08■□□□□ 0.16
LAMA4-208ENST00000431543 NRCAMQ92823 1304 aa16.08■□□□□ 0.16
LAMA4-208ENST00000431543 GRXCR1A8MXD5 290 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 CHMP2AO43633 222 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 CCNT1O60563 726 aaKnown RBP16.07■□□□□ 0.16
LAMA4-208ENST00000431543 GAS7O60861 476 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 NBNO60934 754 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 GNAT1P11488 350 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 KRT76Q01546 638 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 ORC2Q13416 577 aaPredicted RBP16.07■□□□□ 0.16
LAMA4-208ENST00000431543 MBTPS1Q14703 1052 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 SF3A1Q15459 793 aaKnown RBP16.07■□□□□ 0.16
LAMA4-208ENST00000431543 TCTN1Q2MV58 587 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 LRCH2Q5VUJ6 765 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 MIS18BP1Q6P0N0 1132 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 PSRC1Q6PGN9 363 aaPredicted RBP16.07■□□□□ 0.16
LAMA4-208ENST00000431543 MOXD1Q6UVY6 613 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 TRMT1LQ7Z2T5 733 aaKnown RBP16.07■□□□□ 0.16
LAMA4-208ENST00000431543 HERVK_113Q902F9 699 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 FTOQ9C0B1 505 aaKnown RBP eCLIP16.07■□□□□ 0.16
LAMA4-208ENST00000431543 UNC45AQ9H3U1 944 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 ZNF302Q9NR11 478 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 TRPC6Q9Y210 931 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 TET1Q8NFU7 2136 aa16.07■□□□□ 0.16
LAMA4-208ENST00000431543 KAT6AQ92794 2004 aa16.06■□□□□ 0.16
LAMA4-208ENST00000431543 POTEB3A0JP26 581 aa16.06■□□□□ 0.16
LAMA4-208ENST00000431543 MARCH6O60337 910 aa16.06■□□□□ 0.16
LAMA4-208ENST00000431543 GCFC2P16383 781 aaKnown RBP16.06■□□□□ 0.16
LAMA4-208ENST00000431543 DNM1Q05193 864 aaKnown RBP16.06■□□□□ 0.16
LAMA4-208ENST00000431543 TTC38Q5R3I4 469 aa16.06■□□□□ 0.16
LAMA4-208ENST00000431543 FAM160B1Q5W0V3 765 aa16.06■□□□□ 0.16
LAMA4-208ENST00000431543 PPP4R3AQ6IN85 833 aa16.06■□□□□ 0.16
LAMA4-208ENST00000431543 PDXDC2PQ6P474 469 aa16.06■□□□□ 0.16
LAMA4-208ENST00000431543 POTEBQ6S5H4 581 aa16.06■□□□□ 0.16
LAMA4-208ENST00000431543 TEKT3Q9BXF9 490 aa16.06■□□□□ 0.16
LAMA4-208ENST00000431543 DISC1Q9NRI5 854 aa16.06■□□□□ 0.16
LAMA4-208ENST00000431543 GABBR1Q9UBS5 961 aa16.06■□□□□ 0.16
LAMA4-208ENST00000431543 SAMM50Q9Y512 469 aa16.06■□□□□ 0.16
LAMA4-208ENST00000431543 PCDHA10Q9Y5I2 948 aa16.06■□□□□ 0.16
LAMA4-208ENST00000431543 MAFBQ9Y5Q3 323 aaPredicted RBP16.06■□□□□ 0.16
LAMA4-208ENST00000431543 MBLAC1A4D2B0 266 aaPredicted RBP16.05■□□□□ 0.16
LAMA4-208ENST00000431543 PSAPP07602 524 aa16.05■□□□□ 0.16
LAMA4-208ENST00000431543 CTSHP09668 335 aa16.05■□□□□ 0.16
LAMA4-208ENST00000431543 RFC2P35250 354 aa16.05■□□□□ 0.16
LAMA4-208ENST00000431543 STK38Q15208 465 aa16.05■□□□□ 0.16
LAMA4-208ENST00000431543 UGCGQ16739 394 aa16.05■□□□□ 0.16
LAMA4-208ENST00000431543 FAM173BQ6P4H8 233 aa16.05■□□□□ 0.16
LAMA4-208ENST00000431543 B3GNT9Q6UX72 402 aa16.05■□□□□ 0.16
LAMA4-208ENST00000431543 Q7L0L9 218 aa16.05■□□□□ 0.16
LAMA4-208ENST00000431543 SMAP1Q8IYB5 467 aaPredicted RBP16.05■□□□□ 0.16
LAMA4-208ENST00000431543 HAS1Q92839 578 aa16.05■□□□□ 0.16
LAMA4-208ENST00000431543 KCNMB3Q9NPA1 279 aa16.05■□□□□ 0.16
LAMA4-208ENST00000431543 TFIP11Q9UBB9 837 aaKnown RBP16.05■□□□□ 0.16
LAMA4-208ENST00000431543 TUBE1Q9UJT0 475 aa16.05■□□□□ 0.16
LAMA4-208ENST00000431543 TANC1Q9C0D5 1861 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 RRN3P2A6NIE6 340 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 WDR64B1ANS9 1081 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 RSPH10B2B2RC85 870 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 EML1O00423 815 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 LAD1O00515 517 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 ZNF862O60290 1169 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 BAG4O95429 457 aaKnown RBP16.04■□□□□ 0.16
LAMA4-208ENST00000431543 RSPH10BP0C881 870 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 SLC26A2P50443 739 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 CEBPZQ03701 1054 aaKnown RBP16.04■□□□□ 0.16
LAMA4-208ENST00000431543 ZNF174Q15697 407 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 CKAP2LQ8IYA6 745 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 KCNG4Q8TDN1 519 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 ATP8B4Q8TF62 1192 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 DNAJB3Q8WWF6 145 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 SPATA32Q96LK8 384 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 TCEAL9Q9UHQ7 104 aa16.04■□□□□ 0.16
LAMA4-208ENST00000431543 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.03■□□□□ 0.16
LAMA4-208ENST00000431543 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.03■□□□□ 0.16
LAMA4-208ENST00000431543 ZBBXA8MT70 800 aa16.03■□□□□ 0.16
LAMA4-208ENST00000431543 ZBTB42B2RXF5 422 aa16.03■□□□□ 0.16
LAMA4-208ENST00000431543 HBP1O60381 514 aa16.03■□□□□ 0.16
LAMA4-208ENST00000431543 YEATS4O95619 227 aa16.03■□□□□ 0.16
LAMA4-208ENST00000431543 CHRNA1P02708 482 aa16.03■□□□□ 0.16
LAMA4-208ENST00000431543 CXCL10P02778 98 aa16.03■□□□□ 0.16
LAMA4-208ENST00000431543 PFKMP08237 780 aa16.03■□□□□ 0.16
LAMA4-208ENST00000431543 KLRC1P26715 233 aa16.03■□□□□ 0.16
LAMA4-208ENST00000431543 MCM7P33993 719 aa16.03■□□□□ 0.16
LAMA4-208ENST00000431543 PBX2P40425 430 aa16.03■□□□□ 0.16
LAMA4-208ENST00000431543 TOB1P50616 345 aaPredicted RBP16.03■□□□□ 0.16
LAMA4-208ENST00000431543 SMAD3P84022 425 aaKnown RBP16.03■□□□□ 0.16
LAMA4-208ENST00000431543 CLEC17AQ6ZS10 378 aa16.03■□□□□ 0.16
LAMA4-208ENST00000431543 USP28Q96RU2 1077 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms