RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 HMGCRP04035 888 aa7.15□□□□□ -1.26
PTPN4-204ENST00000431283 AMY2AP04746 511 aa7.15□□□□□ -1.26
PTPN4-204ENST00000431283 C6orf222P0C671 652 aaPredicted RBP7.15□□□□□ -1.26
PTPN4-204ENST00000431283 ZNF888P0CJ79 500 aaPredicted RBP7.15□□□□□ -1.26
PTPN4-204ENST00000431283 AMY2BP19961 511 aa7.15□□□□□ -1.26
PTPN4-204ENST00000431283 TACR2P21452 398 aa7.15□□□□□ -1.26
PTPN4-204ENST00000431283 RRADP55042 308 aa7.15□□□□□ -1.26
PTPN4-204ENST00000431283 HERVK_113P62684 666 aa7.15□□□□□ -1.26
PTPN4-204ENST00000431283 CXXC5Q7LFL8 322 aaKnown RBP7.15□□□□□ -1.26
PTPN4-204ENST00000431283 OTOP2Q7RTS6 562 aa7.15□□□□□ -1.26
PTPN4-204ENST00000431283 TAX1BP1Q86VP1 789 aa7.15□□□□□ -1.26
PTPN4-204ENST00000431283 ARMC5Q96C12 935 aa7.15□□□□□ -1.26
PTPN4-204ENST00000431283 CLASP2O75122 1294 aaKnown RBP7.14□□□□□ -1.27
PTPN4-204ENST00000431283 ETV4P43268 484 aa7.14□□□□□ -1.27
PTPN4-204ENST00000431283 TOP3AQ13472 1001 aaPredicted RBP7.14□□□□□ -1.27
PTPN4-204ENST00000431283 SOGA3Q5TF21 947 aa7.14□□□□□ -1.27
PTPN4-204ENST00000431283 TCTN3Q6NUS6 607 aa7.14□□□□□ -1.27
PTPN4-204ENST00000431283 CISD2Q8N5K1 135 aaKnown RBP7.14□□□□□ -1.27
PTPN4-204ENST00000431283 Q8TCH9 128 aa7.14□□□□□ -1.27
PTPN4-204ENST00000431283 MAGEB10Q96LZ2 347 aaPredicted RBP7.14□□□□□ -1.27
PTPN4-204ENST00000431283 C8orf37Q96NL8 207 aa7.14□□□□□ -1.27
PTPN4-204ENST00000431283 SRPK1Q96SB4 655 aaKnown RBP7.14□□□□□ -1.27
PTPN4-204ENST00000431283 VPS11Q9H270 941 aa7.14□□□□□ -1.27
PTPN4-204ENST00000431283 GALNT8Q9NY28 637 aa7.14□□□□□ -1.27
PTPN4-204ENST00000431283 PODXL2Q9NZ53 605 aa7.14□□□□□ -1.27
PTPN4-204ENST00000431283 ZFR2Q9UPR6 939 aaKnown RBP7.14□□□□□ -1.27
PTPN4-204ENST00000431283 PTPN22Q9Y2R2 807 aa7.14□□□□□ -1.27
PTPN4-204ENST00000431283 NR2E1Q9Y466 385 aa7.14□□□□□ -1.27
PTPN4-204ENST00000431283 ZNF561-AS1K7EIQ3 104 aa7.13□□□□□ -1.27
PTPN4-204ENST00000431283 KCNK3O14649 394 aa7.13□□□□□ -1.27
PTPN4-204ENST00000431283 AKAP8O43823 692 aaKnown RBP7.13□□□□□ -1.27
PTPN4-204ENST00000431283 AOAHP28039 575 aa7.13□□□□□ -1.27
PTPN4-204ENST00000431283 ADCY8P40145 1251 aa7.13□□□□□ -1.27
PTPN4-204ENST00000431283 KCNQ1P51787 676 aa7.13□□□□□ -1.27
PTPN4-204ENST00000431283 PRKD1Q15139 912 aaPredicted RBP7.13□□□□□ -1.27
PTPN4-204ENST00000431283 CDSNQ15517 529 aa7.13□□□□□ -1.27
PTPN4-204ENST00000431283 SLC16A11Q8NCK7 471 aa7.13□□□□□ -1.27
PTPN4-204ENST00000431283 C12orf65Q9H3J6 166 aaKnown RBP7.13□□□□□ -1.27
PTPN4-204ENST00000431283 FOXS1O43638 330 aa7.12□□□□□ -1.27
PTPN4-204ENST00000431283 FZD7O75084 574 aa7.12□□□□□ -1.27
PTPN4-204ENST00000431283 CR2P20023 1033 aa7.12□□□□□ -1.27
PTPN4-204ENST00000431283 MEOX1P50221 254 aa7.12□□□□□ -1.27
PTPN4-204ENST00000431283 LACTBP83111 547 aaPredicted RBP7.12□□□□□ -1.27
PTPN4-204ENST00000431283 ADOQ96SZ5 270 aa7.12□□□□□ -1.27
PTPN4-204ENST00000431283 BTBD2Q9BX70 525 aa7.12□□□□□ -1.27
PTPN4-204ENST00000431283 SFMBT1Q9UHJ3 866 aa7.12□□□□□ -1.27
PTPN4-204ENST00000431283 TESMINQ9Y4I5 508 aa7.12□□□□□ -1.27
PTPN4-204ENST00000431283 SCDO00767 359 aa7.11□□□□□ -1.27
PTPN4-204ENST00000431283 CDC14BO60729 498 aa7.11□□□□□ -1.27
PTPN4-204ENST00000431283 HIP1RO75146 1068 aa7.11□□□□□ -1.27
PTPN4-204ENST00000431283 C4BPAP04003 597 aaKnown RBP7.11□□□□□ -1.27
PTPN4-204ENST00000431283 IL13RA1P78552 427 aa7.11□□□□□ -1.27
PTPN4-204ENST00000431283 SPDYAQ5MJ70 313 aa7.11□□□□□ -1.27
PTPN4-204ENST00000431283 RTKN2Q8IZC4 609 aa7.11□□□□□ -1.27
PTPN4-204ENST00000431283 HIPK4Q8NE63 616 aa7.11□□□□□ -1.27
PTPN4-204ENST00000431283 ZSWIM2Q8NEG5 633 aa7.11□□□□□ -1.27
PTPN4-204ENST00000431283 WWC2-AS2Q96NR7 200 aa7.11□□□□□ -1.27
PTPN4-204ENST00000431283 ZDHHC5Q9C0B5 715 aa7.11□□□□□ -1.27
PTPN4-204ENST00000431283 SLC52A2Q9HAB3 445 aa7.11□□□□□ -1.27
PTPN4-204ENST00000431283 SMURF1Q9HCE7 757 aa7.11□□□□□ -1.27
PTPN4-204ENST00000431283 UCKL1Q9NWZ5 548 aa7.11□□□□□ -1.27
PTPN4-204ENST00000431283 SNTG2Q9NY99 539 aa7.11□□□□□ -1.27
PTPN4-204ENST00000431283 PUF60Q9UHX1 559 aaKnown RBP7.11□□□□□ -1.27
PTPN4-204ENST00000431283 OAZ3Q9UMX2 235 aa7.11□□□□□ -1.27
PTPN4-204ENST00000431283 CCDC163A0A0D9SF12 145 aa7.1□□□□□ -1.27
PTPN4-204ENST00000431283 AMHP03971 560 aa7.1□□□□□ -1.27
PTPN4-204ENST00000431283 COMTP21964 271 aa7.1□□□□□ -1.27
PTPN4-204ENST00000431283 MC4RP32245 332 aa7.1□□□□□ -1.27
PTPN4-204ENST00000431283 ECE1P42892 770 aa7.1□□□□□ -1.27
PTPN4-204ENST00000431283 RASA3Q14644 834 aa7.1□□□□□ -1.27
PTPN4-204ENST00000431283 WNK4Q96J92 1243 aa7.1□□□□□ -1.27
PTPN4-204ENST00000431283 DNAJC7Q99615 494 aa7.1□□□□□ -1.27
PTPN4-204ENST00000431283 ZNF341Q9BYN7 854 aa7.1□□□□□ -1.27
PTPN4-204ENST00000431283 KCNH7Q9NS40 1196 aa7.1□□□□□ -1.27
PTPN4-204ENST00000431283 CDC42EP3Q9UKI2 254 aa7.1□□□□□ -1.27
PTPN4-204ENST00000431283 COQ6Q9Y2Z9 468 aa7.1□□□□□ -1.27
PTPN4-204ENST00000431283 FAM221BA6H8Z2 402 aa7.09□□□□□ -1.27
PTPN4-204ENST00000431283 FOXP2O15409 715 aa7.09□□□□□ -1.27
PTPN4-204ENST00000431283 MMEP08473 750 aa7.09□□□□□ -1.27
PTPN4-204ENST00000431283 SERINC3Q13530 473 aa7.09□□□□□ -1.27
PTPN4-204ENST00000431283 SF3A1Q15459 793 aaKnown RBP7.09□□□□□ -1.27
PTPN4-204ENST00000431283 RNF151Q2KHN1 245 aa7.09□□□□□ -1.27
PTPN4-204ENST00000431283 CRIP3Q6Q6R5 217 aa7.09□□□□□ -1.27
PTPN4-204ENST00000431283 CALML6Q8TD86 181 aa7.09□□□□□ -1.27
PTPN4-204ENST00000431283 OR14A2Q96R54 314 aa7.09□□□□□ -1.27
PTPN4-204ENST00000431283 DPYSL5Q9BPU6 564 aa7.09□□□□□ -1.27
PTPN4-204ENST00000431283 ZNF747Q9BV97 191 aa7.09□□□□□ -1.27
PTPN4-204ENST00000431283 CELF4Q9BZC1 486 aaKnown RBP7.09□□□□□ -1.27
PTPN4-204ENST00000431283 OR10A5Q9H207 317 aa7.09□□□□□ -1.27
PTPN4-204ENST00000431283 BTBD7Q9P203 1132 aa7.09□□□□□ -1.27
PTPN4-204ENST00000431283 FAM184BQ9ULE4 1060 aa7.09□□□□□ -1.27
PTPN4-204ENST00000431283 A0A0G2JNJ9 132 aa7.08□□□□□ -1.28
PTPN4-204ENST00000431283 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.08□□□□□ -1.28
PTPN4-204ENST00000431283 SLC12A8A0AV02 714 aa7.08□□□□□ -1.28
PTPN4-204ENST00000431283 ARHGAP6O43182 974 aa7.08□□□□□ -1.28
PTPN4-204ENST00000431283 RAD17O75943 681 aa7.08□□□□□ -1.28
PTPN4-204ENST00000431283 RASGRP1O95267 797 aa7.08□□□□□ -1.28
PTPN4-204ENST00000431283 RBL2Q08999 1139 aa7.08□□□□□ -1.28
PTPN4-204ENST00000431283 TMEM132BQ14DG7 1078 aa7.08□□□□□ -1.28
PTPN4-204ENST00000431283 R3HDM1Q15032 1099 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms