RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 NAP1L4Q99733 375 aaKnown RBP12.46□□□□□ -0.42
SMPD4-205ENST00000431183 AGO4Q9HCK5 861 aaKnown RBP12.46□□□□□ -0.42
SMPD4-205ENST00000431183 RNF19AQ9NV58 838 aa12.46□□□□□ -0.42
SMPD4-205ENST00000431183 VAV3Q9UKW4 847 aa12.46□□□□□ -0.42
SMPD4-205ENST00000431183 TXNP10599 105 aaKnown RBP12.45□□□□□ -0.42
SMPD4-205ENST00000431183 QARSP47897 775 aaKnown RBP12.45□□□□□ -0.42
SMPD4-205ENST00000431183 RAPGEF1Q13905 1077 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 TDRD12Q587J7 1177 aaKnown RBP12.45□□□□□ -0.42
SMPD4-205ENST00000431183 ANKFY1Q9P2R3 1169 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 STK17AQ9UEE5 414 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 PSMD10O75832 226 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 KRT9P35527 623 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 CASP4P49662 377 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 POLGP54098 1239 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-205ENST00000431183 LBX2Q6XYB7 198 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 FASTKD5Q7L8L6 764 aaKnown RBP12.45□□□□□ -0.42
SMPD4-205ENST00000431183 DNAAF5Q86Y56 855 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 DHX37Q8IY37 1157 aaKnown RBP12.45□□□□□ -0.42
SMPD4-205ENST00000431183 VTI1AQ96AJ9 217 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 SAAL1Q96ER3 474 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 DRC1Q96MC2 740 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 NACC1Q96RE7 527 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 HSD3B7Q9H2F3 369 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 ZSWIM4Q9H7M6 989 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 PPP2R3BQ9Y5P8 575 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 ERICH4A6NGS2 130 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 EXOC3O60645 756 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 ACTR2P61160 394 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 ERVK-9P63128 1117 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 ERVK-24P63145 666 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 ARMCX5Q6P1M9 558 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 CCDC60Q8IWA6 550 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-205ENST00000431183 LRRC8AQ8IWT6 810 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 JADE2Q9NQC1 790 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 SLC9A2Q9UBY0 812 aa12.45□□□□□ -0.42
SMPD4-205ENST00000431183 TRIM49P0CI25 452 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 TRIM49CP0CI26 452 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 CYP2C19P33261 490 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 MAP3K10Q02779 954 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 TCP11X2Q5H9J9 407 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 TRIML1Q8N9V2 468 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 NLRP4Q96MN2 994 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 SPATA33Q96N06 139 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 AZI2Q9H6S1 392 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 INTS13Q9NVM9 706 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 AGTPBP1Q9UPW5 1226 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 SOWAHDA6NJG2 315 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 WDR64B1ANS9 1081 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 PNMA6AP0CW24 399 aaPredicted RBP12.44□□□□□ -0.42
SMPD4-205ENST00000431183 DLATP10515 647 aaKnown RBP12.44□□□□□ -0.42
SMPD4-205ENST00000431183 ADORA2AP29274 412 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 GIT2Q14161 759 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 FKBP15Q5T1M5 1219 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 VSIG10LQ86VR7 867 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 GPRC5AQ8NFJ5 357 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMPD4-205ENST00000431183 SSC5DA1L4H1 1573 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 IKBKBO14920 756 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 HSDL1Q3SXM5 330 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 Q4G0T1 1027 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 CST9Q5W186 159 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 SPECC1LQ69YQ0 1117 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 GIMAP8Q8ND71 665 aaPredicted RBP12.44□□□□□ -0.42
SMPD4-205ENST00000431183 FAM49AQ9H0Q0 323 aaPredicted RBP12.44□□□□□ -0.42
SMPD4-205ENST00000431183 DEF6Q9H4E7 631 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 PARVGQ9HBI0 331 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 PCDHA10Q9Y5I2 948 aa12.44□□□□□ -0.42
SMPD4-205ENST00000431183 SOWAHBA6NEL2 793 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 P4HBP07237 508 aaKnown RBP12.43□□□□□ -0.42
SMPD4-205ENST00000431183 ZNF286BP0CG31 522 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 CCNE1P24864 410 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 ERCC5P28715 1186 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-205ENST00000431183 ADCYAP1R1P41586 468 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 HSD17B4P51659 736 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 SPIRE1Q08AE8 756 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 NAA30Q147X3 362 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-205ENST00000431183 RWDD2AQ9UIY3 292 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 FAM237AA0A1B0GTK4 181 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 RHOBTB3O94955 611 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 PRKCEQ02156 737 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 ZBTB33Q86T24 672 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 C7orf25Q9BPX7 421 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 ADD3Q9UEY8 706 aaKnown RBP12.43□□□□□ -0.42
SMPD4-205ENST00000431183 PIK3CDO00329 1044 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 RGS20O76081 388 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 ALDH5A1P51649 535 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-205ENST00000431183 SETQ01105 290 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-205ENST00000431183 PCNX4Q63HM2 1172 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 HS2ST1Q7LGA3 356 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 DNAJC19Q96DA6 116 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 SPTLC3Q9NUV7 552 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 COL4A3BPQ9Y5P4 624 aa12.43□□□□□ -0.42
SMPD4-205ENST00000431183 LAMA3Q16787 3333 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 BICDL2A1A5D9 508 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 ACTN1P12814 892 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 TNNT1P13805 278 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 FXR1P51114 621 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMPD4-205ENST00000431183 PPIL2Q13356 520 aa12.42□□□□□ -0.42
SMPD4-205ENST00000431183 EPHA7Q15375 998 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms