RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 CLTBP09497 229 aa16.77■□□□□ 0.28
GARNL3-204ENST00000429629 INSRRP14616 1297 aa16.77■□□□□ 0.28
GARNL3-204ENST00000429629 RBL2Q08999 1139 aa16.77■□□□□ 0.28
GARNL3-204ENST00000429629 PPFIA1Q13136 1202 aa16.77■□□□□ 0.28
GARNL3-204ENST00000429629 PTGISQ16647 500 aa16.77■□□□□ 0.28
GARNL3-204ENST00000429629 GDF6Q6KF10 455 aaPredicted RBP16.77■□□□□ 0.28
GARNL3-204ENST00000429629 FAM173BQ6P4H8 233 aa16.77■□□□□ 0.28
GARNL3-204ENST00000429629 OTUD6AQ7L8S5 288 aa16.77■□□□□ 0.28
GARNL3-204ENST00000429629 ZNF710Q8N1W2 664 aa16.77■□□□□ 0.28
GARNL3-204ENST00000429629 LINC00301Q8NCQ3 95 aa16.77■□□□□ 0.28
GARNL3-204ENST00000429629 ATP11BQ9Y2G3 1177 aa16.77■□□□□ 0.28
GARNL3-204ENST00000429629 FRMPD3Q5JV73 1810 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 MAGEB2O15479 319 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 PQBP1O60828 265 aaKnown RBP16.76■□□□□ 0.27
GARNL3-204ENST00000429629 CAND2O75155 1236 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 SPATA31C1P0DKV0 1188 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 PRKCEQ02156 737 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 TARBP2Q15633 366 aaKnown RBP16.76■□□□□ 0.27
GARNL3-204ENST00000429629 GRIK4Q16099 956 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 FAM47CQ5HY64 1035 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 KRT79Q5XKE5 535 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 TAF2Q6P1X5 1199 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 SERINC5Q86VE9 423 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 CKAP2LQ8IYA6 745 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 CAGE1Q8TC20 777 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 CTAGE1Q96RT6 745 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 TRPV6Q9H1D0 765 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 ANKEF1Q9NU02 776 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 SETD4Q9NVD3 440 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 RCOR1Q9UKL0 485 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 TBX21Q9UL17 535 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 TRPC6Q9Y210 931 aa16.76■□□□□ 0.27
GARNL3-204ENST00000429629 SCN10AQ9Y5Y9 1956 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 POTEMA6NI47 508 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 PITPNM1O00562 1244 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 MARK3P27448 753 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 UGCGQ16739 394 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 HYIQ5T013 277 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 MARCH8Q5T0T0 291 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 FAM43BQ6ZT52 329 aaPredicted RBP16.75■□□□□ 0.27
GARNL3-204ENST00000429629 CATSPER3Q86XQ3 398 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 CCDC155Q8N6L0 562 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 ZNF579Q8NAF0 562 aaKnown RBP16.75■□□□□ 0.27
GARNL3-204ENST00000429629 KCNG4Q8TDN1 519 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 LMBR1Q8WVP7 490 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 DYDC2Q96IM9 177 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 NACC1Q96RE7 527 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 LXNQ9BS40 222 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 PDLIM7Q9NR12 457 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 TRMT13Q9NUP7 481 aaKnown RBP16.75■□□□□ 0.27
GARNL3-204ENST00000429629 TMEM39AQ9NV64 488 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 RGL1Q9NZL6 768 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 PCDHA2Q9Y5H9 948 aa16.75■□□□□ 0.27
GARNL3-204ENST00000429629 VWA3AA6NCI4 1184 aa16.74■□□□□ 0.27
GARNL3-204ENST00000429629 ZBTB42B2RXF5 422 aa16.74■□□□□ 0.27
GARNL3-204ENST00000429629 PARNO95453 639 aaKnown RBP16.74■□□□□ 0.27
GARNL3-204ENST00000429629 BFSP2Q13515 415 aa16.74■□□□□ 0.27
GARNL3-204ENST00000429629 ANO5Q75V66 913 aa16.74■□□□□ 0.27
GARNL3-204ENST00000429629 TPH2Q8IWU9 490 aa16.74■□□□□ 0.27
GARNL3-204ENST00000429629 NME8Q8N427 588 aa16.74■□□□□ 0.27
GARNL3-204ENST00000429629 KRI1Q8N9T8 703 aaKnown RBP16.74■□□□□ 0.27
GARNL3-204ENST00000429629 BANK1Q8NDB2 785 aa16.74■□□□□ 0.27
GARNL3-204ENST00000429629 IPO9Q96P70 1041 aaKnown RBP16.74■□□□□ 0.27
GARNL3-204ENST00000429629 CEP89Q96ST8 783 aa16.74■□□□□ 0.27
GARNL3-204ENST00000429629 JPH2Q9BR39 696 aaPredicted RBP16.74■□□□□ 0.27
GARNL3-204ENST00000429629 PRKAG2Q9UGJ0 569 aa16.74■□□□□ 0.27
GARNL3-204ENST00000429629 FBXO2Q9UK22 296 aaPredicted RBP16.74■□□□□ 0.27
GARNL3-204ENST00000429629 NOD1Q9Y239 953 aa16.74■□□□□ 0.27
GARNL3-204ENST00000429629 SMIM35A0A1B0GVV1 85 aa16.73■□□□□ 0.27
GARNL3-204ENST00000429629 DDX11L8A8MPP1 907 aa16.73■□□□□ 0.27
GARNL3-204ENST00000429629 SPTLC2O15270 562 aa16.73■□□□□ 0.27
GARNL3-204ENST00000429629 TIMP1P01033 207 aa16.73■□□□□ 0.27
GARNL3-204ENST00000429629 YWHABP31946 246 aaKnown RBP16.73■□□□□ 0.27
GARNL3-204ENST00000429629 CHMP4BP1P59074 171 aa16.73■□□□□ 0.27
GARNL3-204ENST00000429629 KRT85P78386 507 aa16.73■□□□□ 0.27
GARNL3-204ENST00000429629 DNM1Q05193 864 aaKnown RBP16.73■□□□□ 0.27
GARNL3-204ENST00000429629 HIC1Q14526 733 aa16.73■□□□□ 0.27
GARNL3-204ENST00000429629 STK38Q15208 465 aa16.73■□□□□ 0.27
GARNL3-204ENST00000429629 MTHFD1LQ6UB35 978 aa16.73■□□□□ 0.27
GARNL3-204ENST00000429629 MMTAG2Q9BU76 263 aaKnown RBP16.73■□□□□ 0.27
GARNL3-204ENST00000429629 CCSER1Q9C0I3 900 aa16.73■□□□□ 0.27
GARNL3-204ENST00000429629 SCAND2PQ9GZW5 306 aaPredicted RBP16.73■□□□□ 0.27
GARNL3-204ENST00000429629 NT5C3AQ9H0P0 336 aa16.73■□□□□ 0.27
GARNL3-204ENST00000429629 CHMP5Q9NZZ3 219 aa16.73■□□□□ 0.27
GARNL3-204ENST00000429629 WRAP73Q9P2S5 460 aaPredicted RBP16.73■□□□□ 0.27
GARNL3-204ENST00000429629 TFIP11Q9UBB9 837 aaKnown RBP16.73■□□□□ 0.27
GARNL3-204ENST00000429629 TUBE1Q9UJT0 475 aa16.73■□□□□ 0.27
GARNL3-204ENST00000429629 DBR1Q9UK59 544 aaKnown RBP16.73■□□□□ 0.27
GARNL3-204ENST00000429629 DNAH12Q6ZR08 3092 aa16.73■□□□□ 0.27
GARNL3-204ENST00000429629 IGKV6-21A0A0C4DH24 114 aa16.72■□□□□ 0.27
GARNL3-204ENST00000429629 TRIM43BA6NCK2 446 aa16.72■□□□□ 0.27
GARNL3-204ENST00000429629 TREHO43280 583 aa16.72■□□□□ 0.27
GARNL3-204ENST00000429629 MED24O75448 989 aa16.72■□□□□ 0.27
GARNL3-204ENST00000429629 KLRC1P26715 233 aa16.72■□□□□ 0.27
GARNL3-204ENST00000429629 CCT6AP40227 531 aaKnown RBP16.72■□□□□ 0.27
GARNL3-204ENST00000429629 RFC5P40937 340 aa16.72■□□□□ 0.27
GARNL3-204ENST00000429629 UBA7P41226 1012 aa16.72■□□□□ 0.27
GARNL3-204ENST00000429629 CDC42EP1Q00587 391 aa16.72■□□□□ 0.27
GARNL3-204ENST00000429629 CTTNQ14247 550 aaKnown RBP16.72■□□□□ 0.27
GARNL3-204ENST00000429629 TRIM71Q2Q1W2 868 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms