RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 OLFML3Q9NRN5 406 aa17.87■□□□□ 0.45
MBD4-203ENST00000429544 CNOT7Q9UIV1 285 aaKnown RBP17.87■□□□□ 0.45
MBD4-203ENST00000429544 MACROD2A1Z1Q3 448 aa17.86■□□□□ 0.45
MBD4-203ENST00000429544 NR3C1P04150 777 aa17.86■□□□□ 0.45
MBD4-203ENST00000429544 VCAM1P19320 739 aa17.86■□□□□ 0.45
MBD4-203ENST00000429544 KIF5AQ12840 1032 aa17.86■□□□□ 0.45
MBD4-203ENST00000429544 B3GNT9Q6UX72 402 aa17.86■□□□□ 0.45
MBD4-203ENST00000429544 FRMD5Q7Z6J6 570 aa17.86■□□□□ 0.45
MBD4-203ENST00000429544 MCF2L2Q86YR7 1114 aa17.86■□□□□ 0.45
MBD4-203ENST00000429544 NACC1Q96RE7 527 aa17.86■□□□□ 0.45
MBD4-203ENST00000429544 HDAC6Q9UBN7 1215 aa17.86■□□□□ 0.45
MBD4-203ENST00000429544 ARMCX3Q9UH62 379 aaPredicted RBP17.86■□□□□ 0.45
MBD4-203ENST00000429544 PCDHA13Q9Y5I0 950 aa17.86■□□□□ 0.45
MBD4-203ENST00000429544 CLIC2O15247 247 aa17.86■□□□□ 0.45
MBD4-203ENST00000429544 ATP1A1P05023 1023 aaKnown RBP17.86■□□□□ 0.45
MBD4-203ENST00000429544 GLIPR1L2Q4G1C9 344 aa17.86■□□□□ 0.45
MBD4-203ENST00000429544 RIT2Q99578 217 aa17.86■□□□□ 0.45
MBD4-203ENST00000429544 TSGA10Q9BZW7 698 aa17.86■□□□□ 0.45
MBD4-203ENST00000429544 PARP14Q460N5 1801 aa17.85■□□□□ 0.45
MBD4-203ENST00000429544 MUTP22033 750 aa17.85■□□□□ 0.45
MBD4-203ENST00000429544 TDRD12Q587J7 1177 aaKnown RBP17.85■□□□□ 0.45
MBD4-203ENST00000429544 SFMBT2Q5VUG0 894 aa17.85■□□□□ 0.45
MBD4-203ENST00000429544 TMCO3Q6UWJ1 677 aa17.85■□□□□ 0.45
MBD4-203ENST00000429544 PURBQ96QR8 312 aaKnown RBP17.85■□□□□ 0.45
MBD4-203ENST00000429544 IKZF4Q9H2S9 585 aa17.85■□□□□ 0.45
MBD4-203ENST00000429544 RPAP3Q9H6T3 665 aaPredicted RBP17.85■□□□□ 0.45
MBD4-203ENST00000429544 PARVGQ9HBI0 331 aa17.85■□□□□ 0.45
MBD4-203ENST00000429544 KCNH7Q9NS40 1196 aa17.85■□□□□ 0.45
MBD4-203ENST00000429544 GINM1Q9NU53 330 aa17.85■□□□□ 0.45
MBD4-203ENST00000429544 PPP1R9AQ9ULJ8 1098 aa17.85■□□□□ 0.45
MBD4-203ENST00000429544 CTDP1Q9Y5B0 961 aaPredicted RBP17.85■□□□□ 0.45
MBD4-203ENST00000429544 ZMYM2Q9UBW7 1377 aa17.85■□□□□ 0.45
MBD4-203ENST00000429544 AKAP3O75969 853 aa17.84■□□□□ 0.45
MBD4-203ENST00000429544 LCA5LO95447 670 aa17.84■□□□□ 0.45
MBD4-203ENST00000429544 ZC2HC1CQ53FD0 456 aaPredicted RBP17.84■□□□□ 0.45
MBD4-203ENST00000429544 TRAPPC11Q7Z392 1133 aa17.84■□□□□ 0.45
MBD4-203ENST00000429544 MIER3Q7Z3K6 550 aa17.84■□□□□ 0.45
MBD4-203ENST00000429544 SECISBP2LQ93073 1101 aaKnown RBP17.84■□□□□ 0.45
MBD4-203ENST00000429544 PARD6BQ9BYG5 372 aa17.84■□□□□ 0.45
MBD4-203ENST00000429544 EIF3DO15371 548 aaKnown RBP eCLIP17.84■□□□□ 0.45
MBD4-203ENST00000429544 USO1O60763 962 aaKnown RBP17.84■□□□□ 0.45
MBD4-203ENST00000429544 BCRP11274 1271 aa17.84■□□□□ 0.45
MBD4-203ENST00000429544 CASP4P49662 377 aa17.84■□□□□ 0.45
MBD4-203ENST00000429544 TKFCQ3LXA3 575 aa17.84■□□□□ 0.45
MBD4-203ENST00000429544 DCAF17Q5H9S7 520 aaPredicted RBP17.84■□□□□ 0.45
MBD4-203ENST00000429544 HGSNATQ68CP4 663 aa17.84■□□□□ 0.45
MBD4-203ENST00000429544 ARHGAP27Q6ZUM4 889 aa17.84■□□□□ 0.45
MBD4-203ENST00000429544 SYTL5Q8TDW5 730 aaPredicted RBP17.84■□□□□ 0.45
MBD4-203ENST00000429544 GANQ9H2C0 597 aa17.84■□□□□ 0.45
MBD4-203ENST00000429544 CTAGE15A4D2H0 777 aa17.83■□□□□ 0.45
MBD4-203ENST00000429544 ARHGEF35A5YM69 484 aa17.83■□□□□ 0.45
MBD4-203ENST00000429544 TLR2O60603 784 aa17.83■□□□□ 0.45
MBD4-203ENST00000429544 SEC31AO94979 1220 aaKnown RBP17.83■□□□□ 0.45
MBD4-203ENST00000429544 AFPP02771 609 aaKnown RBP17.83■□□□□ 0.45
MBD4-203ENST00000429544 CTAGE8P0CG41 777 aa17.83■□□□□ 0.45
MBD4-203ENST00000429544 EPB41P11171 864 aaKnown RBP17.83■□□□□ 0.45
MBD4-203ENST00000429544 EIF2AK2P19525 551 aaKnown RBP17.83■□□□□ 0.45
MBD4-203ENST00000429544 RPL13P26373 211 aaKnown RBP17.83■□□□□ 0.45
MBD4-203ENST00000429544 CTAGE6Q86UF2 777 aa17.83■□□□□ 0.45
MBD4-203ENST00000429544 KSR1Q8IVT5 923 aa17.83■□□□□ 0.45
MBD4-203ENST00000429544 CTAGE4Q8IX94 777 aa17.83■□□□□ 0.45
MBD4-203ENST00000429544 TAAR1Q96RJ0 339 aa17.83■□□□□ 0.45
MBD4-203ENST00000429544 NUCKS1Q9H1E3 243 aaKnown RBP17.83■□□□□ 0.45
MBD4-203ENST00000429544 TGFB1I1O43294 461 aa17.83■□□□□ 0.44
MBD4-203ENST00000429544 MRPS9P82933 396 aaKnown RBP17.83■□□□□ 0.44
MBD4-203ENST00000429544 GHRHRQ02643 423 aa17.83■□□□□ 0.44
MBD4-203ENST00000429544 SPP2Q13103 211 aa17.83■□□□□ 0.44
MBD4-203ENST00000429544 MAPK8IP2Q13387 824 aaPredicted RBP17.83■□□□□ 0.44
MBD4-203ENST00000429544 RAPGEF1Q13905 1077 aa17.83■□□□□ 0.44
MBD4-203ENST00000429544 NIPA1Q7RTP0 329 aa17.83■□□□□ 0.44
MBD4-203ENST00000429544 MLXIPQ9HAP2 919 aa17.83■□□□□ 0.44
MBD4-203ENST00000429544 UBIAD1Q9Y5Z9 338 aa17.83■□□□□ 0.44
MBD4-203ENST00000429544 COL11A1P12107 1806 aaPredicted RBP17.83■□□□□ 0.44
MBD4-203ENST00000429544 SSU72P8A0A1W2PR75 194 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 SLC16A3O15427 465 aaKnown RBP17.82■□□□□ 0.44
MBD4-203ENST00000429544 ACTN1P12814 892 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 XRCC5P13010 732 aaKnown RBP17.82■□□□□ 0.44
MBD4-203ENST00000429544 GFPT1Q06210 699 aaPredicted RBP17.82■□□□□ 0.44
MBD4-203ENST00000429544 ITGB3BPQ13352 177 aaPredicted RBP17.82■□□□□ 0.44
MBD4-203ENST00000429544 ASTE1Q2TB18 679 aaPredicted RBP17.82■□□□□ 0.44
MBD4-203ENST00000429544 SLC9C1Q4G0N8 1177 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 TCERG1LQ5VWI1 586 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 PCNX4Q63HM2 1172 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 NEK9Q8TD19 979 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 SYN2Q92777 582 aaPredicted RBP17.82■□□□□ 0.44
MBD4-203ENST00000429544 AGO4Q9HCK5 861 aaKnown RBP17.82■□□□□ 0.44
MBD4-203ENST00000429544 MYH10P35580 1976 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 ZNF541Q9H0D2 1346 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 LTBP3Q9NS15 1303 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 FZD9O00144 591 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 ZBED4O75132 1171 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 SERPING1P05155 500 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 MAGEA1P43355 309 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 ZNF131P52739 623 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 USP14P54578 494 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 RPS6P62753 249 aaKnown RBP17.82■□□□□ 0.44
MBD4-203ENST00000429544 PRAMEF18Q5VWM3 479 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 PAPD7Q5XG87 772 aaKnown RBP17.82■□□□□ 0.44
MBD4-203ENST00000429544 DCAF15Q66K64 600 aa17.82■□□□□ 0.44
MBD4-203ENST00000429544 FAM178BQ8IXR5 827 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms