RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 PHKBQ93100 1093 aa17.69■□□□□ 0.42
SEC13-210ENST00000428626 ZNF689Q96CS4 500 aaPredicted RBP17.69■□□□□ 0.42
SEC13-210ENST00000428626 IL17RAQ96F46 866 aa17.69■□□□□ 0.42
SEC13-210ENST00000428626 SAMD11Q96NU1 681 aa17.69■□□□□ 0.42
SEC13-210ENST00000428626 AGXT2Q9BYV1 514 aa17.69■□□□□ 0.42
SEC13-210ENST00000428626 ZMYND12Q9H0C1 365 aa17.69■□□□□ 0.42
SEC13-210ENST00000428626 PCDHA2Q9Y5H9 948 aa17.69■□□□□ 0.42
SEC13-210ENST00000428626 POTEB3A0JP26 581 aa17.68■□□□□ 0.42
SEC13-210ENST00000428626 ZBTB42B2RXF5 422 aa17.68■□□□□ 0.42
SEC13-210ENST00000428626 CYP3A4P08684 503 aa17.68■□□□□ 0.42
SEC13-210ENST00000428626 POTEBQ6S5H4 581 aa17.68■□□□□ 0.42
SEC13-210ENST00000428626 MTHFD1LQ6UB35 978 aa17.68■□□□□ 0.42
SEC13-210ENST00000428626 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.68■□□□□ 0.42
SEC13-210ENST00000428626 RASGRP4Q8TDF6 673 aa17.68■□□□□ 0.42
SEC13-210ENST00000428626 EVPLQ92817 2033 aa17.68■□□□□ 0.42
SEC13-210ENST00000428626 ESYT2A0FGR8 921 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 PRPF3O43395 683 aaKnown RBP17.67■□□□□ 0.42
SEC13-210ENST00000428626 COL9A1P20849 921 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 KCNA5P22460 613 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 RPS6KB1P23443 525 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 ZNF76P36508 570 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 FGD1P98174 961 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 TCEAL5Q5H9L2 206 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 BLOC1S2Q6QNY1 142 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 FBXL16Q8N461 479 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 FIBCD1Q8N539 461 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 GLT8D2Q9H1C3 349 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 TMX1Q9H3N1 280 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 EPHX3Q9H6B9 360 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 CDHR5Q9HBB8 845 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 PADI3Q9ULW8 664 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 TRPV2Q9Y5S1 764 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 ADGRA3Q8IWK6 1321 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 IGSF9BQ9UPX0 1349 aa17.67■□□□□ 0.42
SEC13-210ENST00000428626 KIAA1671Q9BY89 1806 aa17.66■□□□□ 0.42
SEC13-210ENST00000428626 SMIM35A0A1B0GVV1 85 aa17.66■□□□□ 0.42
SEC13-210ENST00000428626 C5orf67F2Z3F1 127 aa17.66■□□□□ 0.42
SEC13-210ENST00000428626 GRM6O15303 877 aa17.66■□□□□ 0.42
SEC13-210ENST00000428626 DGKIO75912 1065 aa17.66■□□□□ 0.42
SEC13-210ENST00000428626 KLRC1P26715 233 aa17.66■□□□□ 0.42
SEC13-210ENST00000428626 CTNNB1P35222 781 aa17.66■□□□□ 0.42
SEC13-210ENST00000428626 BMPR1AP36894 532 aa17.66■□□□□ 0.42
SEC13-210ENST00000428626 TMEM266Q2M3C6 531 aa17.66■□□□□ 0.42
SEC13-210ENST00000428626 LEXMQ3ZCV2 418 aa17.66■□□□□ 0.42
SEC13-210ENST00000428626 IER5Q5VY09 327 aa17.66■□□□□ 0.42
SEC13-210ENST00000428626 BANK1Q8NDB2 785 aa17.66■□□□□ 0.42
SEC13-210ENST00000428626 TMEM40Q8WWA1 233 aa17.66■□□□□ 0.42
SEC13-210ENST00000428626 CLP1Q92989 425 aaKnown RBP17.66■□□□□ 0.42
SEC13-210ENST00000428626 CELF4Q9BZC1 486 aaKnown RBP17.66■□□□□ 0.42
SEC13-210ENST00000428626 NCOA5Q9HCD5 579 aaKnown RBP17.66■□□□□ 0.42
SEC13-210ENST00000428626 WDR81Q562E7 1941 aa17.65■□□□□ 0.42
SEC13-210ENST00000428626 IPO5O00410 1097 aaKnown RBP17.65■□□□□ 0.42
SEC13-210ENST00000428626 BACH1O14867 736 aa17.65■□□□□ 0.42
SEC13-210ENST00000428626 IL9P15248 144 aa17.65■□□□□ 0.42
SEC13-210ENST00000428626 GATMP50440 423 aa17.65■□□□□ 0.42
SEC13-210ENST00000428626 COL19A1Q14993 1142 aa17.65■□□□□ 0.42
SEC13-210ENST00000428626 PTPROQ16827 1216 aa17.65■□□□□ 0.42
SEC13-210ENST00000428626 SWSAP1Q6NVH7 229 aa17.65■□□□□ 0.42
SEC13-210ENST00000428626 KIAA0319LQ8IZA0 1049 aa17.65■□□□□ 0.42
SEC13-210ENST00000428626 REXO1Q8N1G1 1221 aaKnown RBP17.65■□□□□ 0.42
SEC13-210ENST00000428626 ATP8B4Q8TF62 1192 aa17.65■□□□□ 0.42
SEC13-210ENST00000428626 LENG9Q96B70 501 aa17.65■□□□□ 0.42
SEC13-210ENST00000428626 SQORQ9Y6N5 450 aa17.65■□□□□ 0.42
SEC13-210ENST00000428626 KDM3AQ9Y4C1 1321 aa17.65■□□□□ 0.42
SEC13-210ENST00000428626 MYH9P35579 1960 aaKnown RBP17.64■□□□□ 0.41
SEC13-210ENST00000428626 CCDC196A0A1B0GTZ2 297 aa17.64■□□□□ 0.41
SEC13-210ENST00000428626 H3BQ06 376 aaPredicted RBP17.64■□□□□ 0.41
SEC13-210ENST00000428626 HBP1O60381 514 aa17.64■□□□□ 0.41
SEC13-210ENST00000428626 MGEA5O60502 916 aa17.64■□□□□ 0.41
SEC13-210ENST00000428626 PDIA3P30101 505 aaKnown RBP17.64■□□□□ 0.41
SEC13-210ENST00000428626 SLC26A2P50443 739 aa17.64■□□□□ 0.41
SEC13-210ENST00000428626 EVCP57679 992 aa17.64■□□□□ 0.41
SEC13-210ENST00000428626 CCT2P78371 535 aaKnown RBP17.64■□□□□ 0.41
SEC13-210ENST00000428626 CAMK1Q14012 370 aa17.64■□□□□ 0.41
SEC13-210ENST00000428626 TOB2Q14106 344 aaPredicted RBP17.64■□□□□ 0.41
SEC13-210ENST00000428626 BTG3Q14201 252 aaPredicted RBP17.64■□□□□ 0.41
SEC13-210ENST00000428626 TIGD5Q53EQ6 642 aa17.64■□□□□ 0.41
SEC13-210ENST00000428626 PDXDC2PQ6P474 469 aa17.64■□□□□ 0.41
SEC13-210ENST00000428626 NEK9Q8TD19 979 aa17.64■□□□□ 0.41
SEC13-210ENST00000428626 ZNF577Q9BSK1 485 aa17.64■□□□□ 0.41
SEC13-210ENST00000428626 C6orf50Q9HD87 102 aa17.64■□□□□ 0.41
SEC13-210ENST00000428626 ZNF302Q9NR11 478 aa17.64■□□□□ 0.41
SEC13-210ENST00000428626 VPS54Q9P1Q0 977 aa17.64■□□□□ 0.41
SEC13-210ENST00000428626 MRPL42Q9Y6G3 142 aaKnown RBP17.64■□□□□ 0.41
SEC13-210ENST00000428626 RPLP2P05387 115 aaKnown RBP17.63■□□□□ 0.41
SEC13-210ENST00000428626 CIITAP33076 1130 aa17.63■□□□□ 0.41
SEC13-210ENST00000428626 KRT76Q01546 638 aa17.63■□□□□ 0.41
SEC13-210ENST00000428626 PRR16Q569H4 304 aa17.63■□□□□ 0.41
SEC13-210ENST00000428626 CCDC136Q96JN2 1154 aa17.63■□□□□ 0.41
SEC13-210ENST00000428626 SLC26A6Q9BXS9 759 aa17.63■□□□□ 0.41
SEC13-210ENST00000428626 NSUN3Q9H649 340 aaKnown RBP17.63■□□□□ 0.41
SEC13-210ENST00000428626 ERVK-5Q9HDB9 667 aa17.63■□□□□ 0.41
SEC13-210ENST00000428626 NOC2LQ9Y3T9 749 aaKnown RBP17.63■□□□□ 0.41
SEC13-210ENST00000428626 MAFBQ9Y5Q3 323 aaPredicted RBP17.63■□□□□ 0.41
SEC13-210ENST00000428626 CSPG5O95196 566 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 C22orf31O95567 290 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 RB1P06400 928 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 IFNAR1P17181 557 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 DNAJB1P25685 340 aa17.62■□□□□ 0.41
SEC13-210ENST00000428626 GTF2F1P35269 517 aaKnown RBP eCLIP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms