RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ADAMTS3O15072 1205 aa18.91■□□□□ 0.62
VARS-216ENST00000428445 MAFGO15525 162 aa18.91■□□□□ 0.62
VARS-216ENST00000428445 ITGB1P05556 798 aa18.91■□□□□ 0.62
VARS-216ENST00000428445 STAT5BP51692 787 aa18.91■□□□□ 0.62
VARS-216ENST00000428445 NAPAP54920 295 aa18.91■□□□□ 0.62
VARS-216ENST00000428445 IER5Q5VY09 327 aa18.91■□□□□ 0.62
VARS-216ENST00000428445 CELF4Q9BZC1 486 aaKnown RBP18.91■□□□□ 0.62
VARS-216ENST00000428445 AGO4Q9HCK5 861 aaKnown RBP18.91■□□□□ 0.62
VARS-216ENST00000428445 GINS2Q9Y248 185 aa18.91■□□□□ 0.62
VARS-216ENST00000428445 PCDHA2Q9Y5H9 948 aa18.91■□□□□ 0.62
VARS-216ENST00000428445 C19orf67A6NJJ6 358 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 MBTPS2O43462 519 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 DCXO43602 365 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 MGEA5O60502 916 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 PPFIA3O75145 1194 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 ALADP13716 330 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 FUT2Q10981 343 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 APOA5Q6Q788 366 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 MTHFD1LQ6UB35 978 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 SGMS1Q86VZ5 419 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 ADHFE1Q8IWW8 467 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 KLHL23Q8NBE8 558 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 SPPL3Q8TCT6 385 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 PPP1R16BQ96T49 567 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 SDF4Q9BRK5 362 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 LMAN2LQ9H0V9 348 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 RIC8AQ9NPQ8 531 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 TRIOO75962 3097 aa18.9■□□□□ 0.62
VARS-216ENST00000428445 PLXNA4Q9HCM2 1894 aa18.89■□□□□ 0.61
VARS-216ENST00000428445 WDFY4Q6ZS81 3184 aa18.89■□□□□ 0.61
VARS-216ENST00000428445 SMCO2A6NFE2 343 aa18.89■□□□□ 0.61
VARS-216ENST00000428445 STXBP3O00186 592 aa18.89■□□□□ 0.61
VARS-216ENST00000428445 CCNE2O96020 404 aa18.89■□□□□ 0.61
VARS-216ENST00000428445 MMP1P03956 469 aa18.89■□□□□ 0.61
VARS-216ENST00000428445 KLRC1P26715 233 aa18.89■□□□□ 0.61
VARS-216ENST00000428445 NFX1Q12986 1120 aaKnown RBP18.89■□□□□ 0.61
VARS-216ENST00000428445 PAK2Q13177 524 aa18.89■□□□□ 0.61
VARS-216ENST00000428445 ADAM15Q13444 863 aa18.89■□□□□ 0.61
VARS-216ENST00000428445 ADCK5Q3MIX3 580 aa18.89■□□□□ 0.61
VARS-216ENST00000428445 PLPPR4Q7Z2D5 763 aa18.89■□□□□ 0.61
VARS-216ENST00000428445 TRMT1LQ7Z2T5 733 aaKnown RBP18.89■□□□□ 0.61
VARS-216ENST00000428445 RBM23Q86U06 439 aaKnown RBP18.89■□□□□ 0.61
VARS-216ENST00000428445 ANO3Q9BYT9 981 aa18.89■□□□□ 0.61
VARS-216ENST00000428445 HCSTQ9UBK5 93 aa18.89■□□□□ 0.61
VARS-216ENST00000428445 RWDD3Q9Y3V2 267 aa18.89■□□□□ 0.61
VARS-216ENST00000428445 ARIH1Q9Y4X5 557 aaPredicted RBP18.89■□□□□ 0.61
VARS-216ENST00000428445 MUC6Q6W4X9 2439 aa18.89■□□□□ 0.61
VARS-216ENST00000428445 M0QZ92 97 aa18.88■□□□□ 0.61
VARS-216ENST00000428445 ATG7O95352 703 aa18.88■□□□□ 0.61
VARS-216ENST00000428445 CDC27P30260 824 aa18.88■□□□□ 0.61
VARS-216ENST00000428445 ADCY7P51828 1080 aa18.88■□□□□ 0.61
VARS-216ENST00000428445 KRT76Q01546 638 aa18.88■□□□□ 0.61
VARS-216ENST00000428445 EXOSC10Q01780 885 aaKnown RBP18.88■□□□□ 0.61
VARS-216ENST00000428445 SMAD2Q15796 467 aaKnown RBP18.88■□□□□ 0.61
VARS-216ENST00000428445 CSPP1Q1MSJ5 1256 aa18.88■□□□□ 0.61
VARS-216ENST00000428445 CEP55Q53EZ4 464 aa18.88■□□□□ 0.61
VARS-216ENST00000428445 JAKMIP3Q5VZ66 844 aa18.88■□□□□ 0.61
VARS-216ENST00000428445 SYNE3Q6ZMZ3 975 aa18.88■□□□□ 0.61
VARS-216ENST00000428445 ALYREFQ86V81 257 aaKnown RBP18.88■□□□□ 0.61
VARS-216ENST00000428445 NPAS4Q8IUM7 802 aa18.88■□□□□ 0.61
VARS-216ENST00000428445 CMTR2Q8IYT2 770 aaKnown RBP18.88■□□□□ 0.61
VARS-216ENST00000428445 RASEFQ8IZ41 740 aa18.88■□□□□ 0.61
VARS-216ENST00000428445 NEK1Q96PY6 1258 aa18.88■□□□□ 0.61
VARS-216ENST00000428445 FAM217BQ9NTX9 383 aaPredicted RBP18.88■□□□□ 0.61
VARS-216ENST00000428445 MUTYHQ9UIF7 546 aa18.88■□□□□ 0.61
VARS-216ENST00000428445 NFASCO94856 1347 aa18.88■□□□□ 0.61
VARS-216ENST00000428445 IGSF9BQ9UPX0 1349 aa18.88■□□□□ 0.61
VARS-216ENST00000428445 MEIS1O00470 390 aa18.87■□□□□ 0.61
VARS-216ENST00000428445 NCK2O43639 380 aa18.87■□□□□ 0.61
VARS-216ENST00000428445 SCG2P13521 617 aa18.87■□□□□ 0.61
VARS-216ENST00000428445 ATP4AP20648 1035 aa18.87■□□□□ 0.61
VARS-216ENST00000428445 ZNF76P36508 570 aa18.87■□□□□ 0.61
VARS-216ENST00000428445 RBM10P98175 930 aaKnown RBP18.87■□□□□ 0.61
VARS-216ENST00000428445 RTN1Q16799 776 aa18.87■□□□□ 0.61
VARS-216ENST00000428445 POF1BQ8WVV4 589 aa18.87■□□□□ 0.61
VARS-216ENST00000428445 TMEM40Q8WWA1 233 aa18.87■□□□□ 0.61
VARS-216ENST00000428445 PLVAPQ9BX97 442 aa18.87■□□□□ 0.61
VARS-216ENST00000428445 FTHL17Q9BXU8 183 aa18.87■□□□□ 0.61
VARS-216ENST00000428445 PRKAG3Q9UGI9 489 aa18.87■□□□□ 0.61
VARS-216ENST00000428445 FAM50BQ9Y247 325 aa18.87■□□□□ 0.61
VARS-216ENST00000428445 NOC2LQ9Y3T9 749 aaKnown RBP18.87■□□□□ 0.61
VARS-216ENST00000428445 IGKV6D-21A0A0A0MT36 114 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 SMIM35A0A1B0GVV1 85 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 FAM86B1E9PN63 330 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 BACH1O14867 736 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 ZBTB43O43298 467 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 FAM86B2P0C5J1 330 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 CPA1P15085 419 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 NDUFV1P49821 464 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 FAM102BQ5T8I3 360 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 ABHD15Q6UXT9 468 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 CCDC60Q8IWA6 550 aaPredicted RBP18.86■□□□□ 0.61
VARS-216ENST00000428445 KIAA0319LQ8IZA0 1049 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 P2RX5Q93086 422 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 ERVK-5Q9HDB9 667 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 RBM28Q9NW13 759 aaKnown RBP18.86■□□□□ 0.61
VARS-216ENST00000428445 CLEC1BQ9P126 229 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 CD207Q9UJ71 328 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 LRFN2Q9ULH4 789 aa18.86■□□□□ 0.61
VARS-216ENST00000428445 NAP1L2Q9ULW6 460 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms