RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 SIP14410 1827 aa14.89□□□□□ -0.03
DEPDC7-203ENST00000427755 TCF20Q9UGU0 1960 aaKnown RBP14.89□□□□□ -0.03
DEPDC7-203ENST00000427755 BDP1A6H8Y1 2624 aa14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 IGLV3-22A0A075B6J6 115 aa14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 POTEB3A0JP26 581 aa14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 DHX15O43143 795 aaKnown RBP14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 RB1P06400 928 aa14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 CYP3A4P08684 503 aa14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 HMGB1P09429 215 aaKnown RBP14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 IL9P15248 144 aa14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 CTNNB1P35222 781 aa14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 IER5Q5VY09 327 aa14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 POTEBQ6S5H4 581 aa14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 MTHFD1LQ6UB35 978 aa14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 ABHD15Q6UXT9 468 aa14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 FAM178BQ8IXR5 827 aa14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 NSUN3Q9H649 340 aaKnown RBP14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 IGSF9BQ9UPX0 1349 aa14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 KDM3AQ9Y4C1 1321 aa14.88□□□□□ -0.03
DEPDC7-203ENST00000427755 BRWD1Q9NSI6 2320 aa14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 SMIM35A0A1B0GVV1 85 aa14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 ESYT2A0FGR8 921 aa14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 GRXCR2A6NFK2 248 aa14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 H3BQ06 376 aaPredicted RBP14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 DDX39AO00148 427 aaKnown RBP14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 GRM6O15303 877 aa14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 SCG2P13521 617 aa14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 SLC26A2P50443 739 aa14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 METAP2P50579 478 aaKnown RBP eCLIP14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 TMEM62Q0P6H9 643 aa14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 APOBRQ0VD83 1088 aa14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 PKN1Q16512 942 aa14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 JAKMIP3Q5VZ66 844 aa14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 PTCRAQ6ISU1 281 aaPredicted RBP14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 CCDC60Q8IWA6 550 aaPredicted RBP14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 TNPO1Q92973 898 aaKnown RBP14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 PABPC5Q96DU9 382 aaKnown RBP14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 C11orf84Q9BUA3 381 aaPredicted RBP14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 CELF4Q9BZC1 486 aaKnown RBP14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 ZMYND12Q9H0C1 365 aa14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 C11orf16Q9NQ32 467 aa14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 PADI3Q9ULW8 664 aa14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 RWDD3Q9Y3V2 267 aa14.87□□□□□ -0.03
DEPDC7-203ENST00000427755 NID2Q14112 1375 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 ZBTB42B2RXF5 422 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 M0QZ92 97 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 HBP1O60381 514 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 ATP4AP20648 1035 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 HSPA4P34932 840 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 ZNF76P36508 570 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 BTG3Q14201 252 aaPredicted RBP14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 PLA2G4DQ86XP0 818 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 NPAS4Q8IUM7 802 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 NME8Q8N427 588 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 FBXL16Q8N461 479 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 ATP8B4Q8TF62 1192 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 LRFN3Q9BTN0 628 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 FTHL17Q9BXU8 183 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 LMAN2LQ9H0V9 348 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 TMX1Q9H3N1 280 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 SNX14Q9Y5W7 946 aa14.86□□□□□ -0.03
DEPDC7-203ENST00000427755 CCDC196A0A1B0GTZ2 297 aa14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 PI4K2BG5E9Z4 385 aa14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 IPO5O00410 1097 aaKnown RBP14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 KLRC1P26715 233 aa14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 LTBRP36941 435 aa14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 KRT76Q01546 638 aa14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 CAMK1Q14012 370 aa14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 CTC1Q2NKJ3 1217 aa14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 PUS10Q3MIT2 529 aaKnown RBP14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 Q6ZUG5 572 aa14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 CMTR2Q8IYT2 770 aaKnown RBP14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 KIAA0319LQ8IZA0 1049 aa14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 GJD3Q8N144 294 aa14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 BRF1Q92994 677 aa14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 JAKMIP1Q96N16 626 aaKnown RBP14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 PLVAPQ9BX97 442 aa14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 AGXT2Q9BYV1 514 aa14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 CDHR5Q9HBB8 845 aa14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 NAP1L2Q9ULW6 460 aaPredicted RBP14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 MRPL42Q9Y6G3 142 aaKnown RBP14.85□□□□□ -0.03
DEPDC7-203ENST00000427755 BACH1O14867 736 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 PRPF3O43395 683 aaKnown RBP14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 MMP1P03956 469 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 FGD1P98174 961 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 HYAL1Q12794 435 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 PAK2Q13177 524 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 NTRK3Q16288 839 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 TMEM266Q2M3C6 531 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 FAM160B1Q5W0V3 765 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 SWSAP1Q6NVH7 229 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 MIS18BP1Q6P0N0 1132 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 PDXDC2PQ6P474 469 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 TMEM40Q8WWA1 233 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 UIMC1Q96RL1 719 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 ERVK-5Q9HDB9 667 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 ZNF302Q9NR11 478 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 PLAGL2Q9UPG8 496 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 COL1A2P08123 1366 aa14.84□□□□□ -0.03
DEPDC7-203ENST00000427755 EDIL3O43854 480 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms