RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 MYO1DO94832 1006 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 TMPRSS15P98073 1019 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 TSPYL6Q8N831 410 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 PCDHA1Q9Y5I3 950 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 ZNF263O14978 683 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 HSPD1P10809 573 aaKnown RBP15.47■□□□□ 0.07
PTPN13-203ENST00000427191 USP40Q9NVE5 1235 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 GGPS1O95749 300 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 TTLL1O95922 423 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 LDHAP00338 332 aaKnown RBP15.47■□□□□ 0.07
PTPN13-203ENST00000427191 C1orf146Q5VVC0 180 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 EPM2AIP1Q7L775 607 aaPredicted RBP15.47■□□□□ 0.07
PTPN13-203ENST00000427191 APLFQ8IW19 511 aaPredicted RBP15.47■□□□□ 0.07
PTPN13-203ENST00000427191 ASXL2Q76L83 1435 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 EPHB1P54762 984 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 SKOR1P84550 965 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 UBE4BO95155 1302 aa15.47■□□□□ 0.07
PTPN13-203ENST00000427191 ABCC2Q92887 1545 aa15.46■□□□□ 0.07
PTPN13-203ENST00000427191 RASSF10A6NK89 507 aa15.46■□□□□ 0.07
PTPN13-203ENST00000427191 PIK3R2O00459 728 aa15.46■□□□□ 0.07
PTPN13-203ENST00000427191 ANGPTL8Q6UXH0 198 aa15.46■□□□□ 0.07
PTPN13-203ENST00000427191 CALN1Q9BXU9 219 aa15.46■□□□□ 0.07
PTPN13-203ENST00000427191 PLEKHA4Q9H4M7 779 aa15.46■□□□□ 0.07
PTPN13-203ENST00000427191 SUGCTQ9HAC7 445 aa15.46■□□□□ 0.07
PTPN13-203ENST00000427191 KIAA1586Q9HCI6 787 aa15.46■□□□□ 0.07
PTPN13-203ENST00000427191 CFAP36Q96G28 342 aa15.46■□□□□ 0.07
PTPN13-203ENST00000427191 NR1H4Q96RI1 486 aaPredicted RBP15.46■□□□□ 0.07
PTPN13-203ENST00000427191 MYOM2P54296 1465 aa15.46■□□□□ 0.07
PTPN13-203ENST00000427191 FAM47CQ5HY64 1035 aa15.46■□□□□ 0.07
PTPN13-203ENST00000427191 ZNF577Q9BSK1 485 aa15.46■□□□□ 0.07
PTPN13-203ENST00000427191 PPCSQ9HAB8 311 aa15.46■□□□□ 0.07
PTPN13-203ENST00000427191 PCDHA13Q9Y5I0 950 aa15.46■□□□□ 0.07
PTPN13-203ENST00000427191 RPAP1Q9BWH6 1393 aaPredicted RBP15.46■□□□□ 0.07
PTPN13-203ENST00000427191 ZAP70P43403 619 aa15.46■□□□□ 0.07
PTPN13-203ENST00000427191 PLEKHG3A1L390 1219 aa15.46■□□□□ 0.06
PTPN13-203ENST00000427191 ORC2Q13416 577 aaPredicted RBP15.46■□□□□ 0.06
PTPN13-203ENST00000427191 CAPRIN1Q14444 709 aaKnown RBP15.46■□□□□ 0.06
PTPN13-203ENST00000427191 EFTUD2Q15029 972 aaKnown RBP eCLIP15.46■□□□□ 0.06
PTPN13-203ENST00000427191 UIMC1Q96RL1 719 aa15.46■□□□□ 0.06
PTPN13-203ENST00000427191 CIAO1O76071 339 aa15.46■□□□□ 0.06
PTPN13-203ENST00000427191 NDUFA10O95299 355 aa15.46■□□□□ 0.06
PTPN13-203ENST00000427191 PYGMP11217 842 aa15.46■□□□□ 0.06
PTPN13-203ENST00000427191 RBL2Q08999 1139 aa15.46■□□□□ 0.06
PTPN13-203ENST00000427191 CFLARO15519 480 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 EAPPQ56P03 285 aaPredicted RBP15.45■□□□□ 0.06
PTPN13-203ENST00000427191 KIAA1755Q5JYT7 1200 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 TBC1D9BQ66K14 1250 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 NUGGCQ68CJ6 796 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 C16orf96A6NNT2 1141 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 VSTM4Q8IW00 320 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 TEX9Q8N6V9 391 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 IL10P22301 178 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 TRPC1P48995 793 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 FSD1LQ9BXM9 530 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 KDM1AO60341 852 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 ICE2Q659A1 982 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 STAMQ92783 540 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 SEPT3Q9UH03 358 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 MAP3K15Q6ZN16 1313 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 DAB1O75553 588 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 SEC24BO95487 1268 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 ZSCAN20P17040 1043 aaPredicted RBP15.45■□□□□ 0.06
PTPN13-203ENST00000427191 MXI1P50539 228 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 KCTD2Q14681 263 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 BTBD6Q96KE9 485 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 CTIFO43310 598 aaKnown RBP15.45■□□□□ 0.06
PTPN13-203ENST00000427191 ALAS1P13196 640 aa15.45■□□□□ 0.06
PTPN13-203ENST00000427191 GIMAP8Q8ND71 665 aaPredicted RBP15.45■□□□□ 0.06
PTPN13-203ENST00000427191 NEURL1BA8MQ27 555 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 GDAP1Q8TB36 358 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 FAM149B1Q96BN6 582 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 SH3GLB2Q9NR46 395 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 HLA-DPA1P20036 260 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 S100A5P33763 92 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 IMPG1Q17R60 797 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 PHF21AQ96BD5 680 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 GPR108Q9NPR9 543 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 ANO9A1A5B4 782 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 NAA35Q5VZE5 725 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.44■□□□□ 0.06
PTPN13-203ENST00000427191 PPARGC1AQ9UBK2 798 aaKnown RBP15.44■□□□□ 0.06
PTPN13-203ENST00000427191 USP21Q9UK80 565 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 AKT3Q9Y243 479 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 ABCC4O15439 1325 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 APBA3O96018 575 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 ABCE1P61221 599 aaKnown RBP15.44■□□□□ 0.06
PTPN13-203ENST00000427191 C2orf54Q08AI8 447 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 CEP55Q53EZ4 464 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 RNF217Q8TC41 542 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 PAIP2BQ9ULR5 123 aaKnown RBP15.44■□□□□ 0.06
PTPN13-203ENST00000427191 TESK2Q96S53 571 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 HPCAL4Q9UM19 191 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 MYBL1P10243 752 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 C4BPBP20851 252 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 CARSP49589 748 aaKnown RBP15.44■□□□□ 0.06
PTPN13-203ENST00000427191 DEFA1P59665 94 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 DEFA3P59666 94 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 MRPS15P82914 257 aaKnown RBP15.44■□□□□ 0.06
PTPN13-203ENST00000427191 TFDP2Q14188 446 aa15.44■□□□□ 0.06
PTPN13-203ENST00000427191 ANP32DO95626 131 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms