RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 PBX1P40424 430 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 QARSP47897 775 aaKnown RBP10.46□□□□□ -0.73
HMGB4-201ENST00000425537 PSMC5P62195 406 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 MRPS9P82933 396 aaKnown RBP10.46□□□□□ -0.73
HMGB4-201ENST00000425537 SNAPC2Q13487 334 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 CTTNQ14247 550 aaKnown RBP10.46□□□□□ -0.73
HMGB4-201ENST00000425537 PWP2Q15269 919 aaKnown RBP10.46□□□□□ -0.73
HMGB4-201ENST00000425537 STXBP2Q15833 593 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 MAN2A1Q16706 1144 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 LDLRAD1Q5T700 205 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 ARMCX5Q6P1M9 558 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 OTUD6AQ7L8S5 288 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 APTXQ7Z2E3 356 aaKnown RBP10.46□□□□□ -0.73
HMGB4-201ENST00000425537 ANKRD35Q8N283 1001 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 ZNF397Q8NF99 534 aaPredicted RBP10.46□□□□□ -0.73
HMGB4-201ENST00000425537 GOLGA5Q8TBA6 731 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 OPTNQ96CV9 577 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 WNK4Q96J92 1243 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 INPP4AQ96PE3 977 aaPredicted RBP10.46□□□□□ -0.73
HMGB4-201ENST00000425537 BAG1Q99933 345 aaPredicted RBP10.46□□□□□ -0.73
HMGB4-201ENST00000425537 REEP2Q9BRK0 252 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 LXNQ9BS40 222 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 NOC4LQ9BVI4 516 aaKnown RBP10.46□□□□□ -0.73
HMGB4-201ENST00000425537 PARVGQ9HBI0 331 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 INTS13Q9NVM9 706 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 RGL1Q9NZL6 768 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 KCNG1Q9UIX4 513 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 TSKSQ9UJT2 592 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 FAM184BQ9ULE4 1060 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 PTPRFP10586 1907 aa10.46□□□□□ -0.74
HMGB4-201ENST00000425537 A0A0G2JMZ2 1700 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 PDXKO00764 312 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 CETN3O15182 167 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 EIF3JO75822 258 aaKnown RBP10.45□□□□□ -0.74
HMGB4-201ENST00000425537 PSAPP07602 524 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 ABCD1P33897 745 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 PSMC6P62333 389 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 TBC1D8BQ0IIM8 1120 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 CCDC40Q4G0X9 1142 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 ARSHQ5FYA8 562 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 RINT1Q6NUQ1 792 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.45□□□□□ -0.74
HMGB4-201ENST00000425537 IRF2BP1Q8IU81 584 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 C4orf19Q8IY42 314 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 DNAJC5GQ8N7S2 189 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 IL31RAQ8NI17 732 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 ATP6V0A1Q93050 837 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 PRIMPOLQ96LW4 560 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 UIMC1Q96RL1 719 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 TMX1Q9H3N1 280 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 SEMA6BQ9H3T3 888 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 MRPL44Q9H9J2 332 aaKnown RBP10.45□□□□□ -0.74
HMGB4-201ENST00000425537 A1CFQ9NQ94 594 aaKnown RBP10.45□□□□□ -0.74
HMGB4-201ENST00000425537 ANKEF1Q9NU02 776 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 ZNHIT6Q9NWK9 470 aaKnown RBP10.45□□□□□ -0.74
HMGB4-201ENST00000425537 LARSQ9P2J5 1176 aaKnown RBP10.45□□□□□ -0.74
HMGB4-201ENST00000425537 PCDHB13Q9Y5F0 798 aa10.45□□□□□ -0.74
HMGB4-201ENST00000425537 POTEB2H3BUK9 544 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 DDX39AO00148 427 aaKnown RBP10.44□□□□□ -0.74
HMGB4-201ENST00000425537 DHX15O43143 795 aaKnown RBP10.44□□□□□ -0.74
HMGB4-201ENST00000425537 TEX33O43247 280 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 MAPTP10636 758 aaKnown RBP10.44□□□□□ -0.74
HMGB4-201ENST00000425537 PMS1P54277 932 aaKnown RBP10.44□□□□□ -0.74
HMGB4-201ENST00000425537 HERVK_113P62684 666 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 CCNA1P78396 465 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 PTPN14Q15678 1187 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 KNOP1Q1ED39 458 aaKnown RBP10.44□□□□□ -0.74
HMGB4-201ENST00000425537 BMT2Q1RMZ1 405 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 FIGNQ5HY92 759 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 KCNV1Q6PIU1 500 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 C1orf186Q6ZWK4 172 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 SFR1Q86XK3 245 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 TMTC1Q8IUR5 882 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 CCAR2Q8N163 923 aaKnown RBP10.44□□□□□ -0.74
HMGB4-201ENST00000425537 MYCT1Q8N699 235 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 DRC1Q96MC2 740 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 PCMTD1Q96MG8 357 aaPredicted RBP10.44□□□□□ -0.74
HMGB4-201ENST00000425537 MOV10L1Q9BXT6 1211 aaKnown RBP10.44□□□□□ -0.74
HMGB4-201ENST00000425537 SPATC1LQ9H0A9 340 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 MROH8Q9H579 483 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 METTL14Q9HCE5 456 aaKnown RBP10.44□□□□□ -0.74
HMGB4-201ENST00000425537 TYW1Q9NV66 732 aaKnown RBP10.44□□□□□ -0.74
HMGB4-201ENST00000425537 CGNQ9P2M7 1197 aaKnown RBP10.44□□□□□ -0.74
HMGB4-201ENST00000425537 TRAF3IP3Q9Y228 551 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 SLC45A1Q9Y2W3 748 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 LUC7L2Q9Y383 392 aaKnown RBP10.44□□□□□ -0.74
HMGB4-201ENST00000425537 RIPK3Q9Y572 518 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 PAXBP1Q9Y5B6 917 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 PCDHA2Q9Y5H9 948 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 PCDHA10Q9Y5I2 948 aa10.44□□□□□ -0.74
HMGB4-201ENST00000425537 MFAP3LO75121 409 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 ECM2O94769 699 aaPredicted RBP10.43□□□□□ -0.74
HMGB4-201ENST00000425537 GCNT3O95395 438 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 CETPP11597 493 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 SCP2P22307 547 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 ICAM3P32942 547 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 ZNF131P52739 623 aa10.43□□□□□ -0.74
HMGB4-201ENST00000425537 MARSP56192 900 aaKnown RBP10.43□□□□□ -0.74
HMGB4-201ENST00000425537 SNRPFP62306 86 aaKnown RBP10.43□□□□□ -0.74
HMGB4-201ENST00000425537 RBL2Q08999 1139 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms