RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 IGSF9BQ9UPX0 1349 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 KDM3AQ9Y4C1 1321 aa17.15■□□□□ 0.34
ATG4B-209ENST00000425239 USP34Q70CQ2 3546 aa17.14■□□□□ 0.33
ATG4B-209ENST00000425239 LINC01565O15544 149 aa17.14■□□□□ 0.33
ATG4B-209ENST00000425239 DHX15O43143 795 aaKnown RBP17.14■□□□□ 0.33
ATG4B-209ENST00000425239 MBTPS2O43462 519 aa17.14■□□□□ 0.33
ATG4B-209ENST00000425239 TBX10O75333 385 aa17.14■□□□□ 0.33
ATG4B-209ENST00000425239 CCNE2O96020 404 aa17.14■□□□□ 0.33
ATG4B-209ENST00000425239 IRS1P35568 1242 aa17.14■□□□□ 0.33
ATG4B-209ENST00000425239 IRX6P78412 446 aaPredicted RBP17.14■□□□□ 0.33
ATG4B-209ENST00000425239 TMEM62Q0P6H9 643 aa17.14■□□□□ 0.33
ATG4B-209ENST00000425239 IER5Q5VY09 327 aa17.14■□□□□ 0.33
ATG4B-209ENST00000425239 APOA5Q6Q788 366 aa17.14■□□□□ 0.33
ATG4B-209ENST00000425239 HEATR3Q7Z4Q2 680 aa17.14■□□□□ 0.33
ATG4B-209ENST00000425239 TEX2Q8IWB9 1127 aa17.14■□□□□ 0.33
ATG4B-209ENST00000425239 CRYGNQ8WXF5 182 aa17.14■□□□□ 0.33
ATG4B-209ENST00000425239 PGBD1Q96JS3 809 aa17.14■□□□□ 0.33
ATG4B-209ENST00000425239 MSLNLQ96KJ4 702 aa17.14■□□□□ 0.33
ATG4B-209ENST00000425239 CELF4Q9BZC1 486 aaKnown RBP17.14■□□□□ 0.33
ATG4B-209ENST00000425239 FAM49AQ9H0Q0 323 aaPredicted RBP17.14■□□□□ 0.33
ATG4B-209ENST00000425239 AGO4Q9HCK5 861 aaKnown RBP17.14■□□□□ 0.33
ATG4B-209ENST00000425239 SMIM35A0A1B0GVV1 85 aa17.13■□□□□ 0.33
ATG4B-209ENST00000425239 ADAMTS3O15072 1205 aa17.13■□□□□ 0.33
ATG4B-209ENST00000425239 RPLP2P05387 115 aaKnown RBP17.13■□□□□ 0.33
ATG4B-209ENST00000425239 ITGB1P05556 798 aa17.13■□□□□ 0.33
ATG4B-209ENST00000425239 STAT5BP51692 787 aa17.13■□□□□ 0.33
ATG4B-209ENST00000425239 CEP55Q53EZ4 464 aa17.13■□□□□ 0.33
ATG4B-209ENST00000425239 MTHFD1LQ6UB35 978 aa17.13■□□□□ 0.33
ATG4B-209ENST00000425239 ABHD15Q6UXT9 468 aa17.13■□□□□ 0.33
ATG4B-209ENST00000425239 MICU3Q86XE3 530 aa17.13■□□□□ 0.33
ATG4B-209ENST00000425239 CMTR2Q8IYT2 770 aaKnown RBP17.13■□□□□ 0.33
ATG4B-209ENST00000425239 FTHL17Q9BXU8 183 aa17.13■□□□□ 0.33
ATG4B-209ENST00000425239 CDHR5Q9HBB8 845 aa17.13■□□□□ 0.33
ATG4B-209ENST00000425239 TRPV2Q9Y5S1 764 aa17.13■□□□□ 0.33
ATG4B-209ENST00000425239 ZBTB42B2RXF5 422 aa17.12■□□□□ 0.33
ATG4B-209ENST00000425239 STXBP3O00186 592 aa17.12■□□□□ 0.33
ATG4B-209ENST00000425239 DCXO43602 365 aa17.12■□□□□ 0.33
ATG4B-209ENST00000425239 ATP4AP20648 1035 aa17.12■□□□□ 0.33
ATG4B-209ENST00000425239 GATMP50440 423 aa17.12■□□□□ 0.33
ATG4B-209ENST00000425239 TSGA10IPQ3SY00 556 aa17.12■□□□□ 0.33
ATG4B-209ENST00000425239 NAALADL2Q58DX5 795 aa17.12■□□□□ 0.33
ATG4B-209ENST00000425239 ADGRD2Q7Z7M1 963 aa17.12■□□□□ 0.33
ATG4B-209ENST00000425239 NPAS4Q8IUM7 802 aa17.12■□□□□ 0.33
ATG4B-209ENST00000425239 KIAA0319LQ8IZA0 1049 aa17.12■□□□□ 0.33
ATG4B-209ENST00000425239 NME8Q8N427 588 aa17.12■□□□□ 0.33
ATG4B-209ENST00000425239 CLEC1BQ9P126 229 aa17.12■□□□□ 0.33
ATG4B-209ENST00000425239 V9GY48 417 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-209ENST00000425239 PIEZO1Q92508 2521 aa17.11■□□□□ 0.33
ATG4B-209ENST00000425239 FAM86B1E9PN63 330 aa17.11■□□□□ 0.33
ATG4B-209ENST00000425239 MGEA5O60502 916 aa17.11■□□□□ 0.33
ATG4B-209ENST00000425239 EYA4O95677 639 aa17.11■□□□□ 0.33
ATG4B-209ENST00000425239 FOSP01100 380 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-209ENST00000425239 FAM86B2P0C5J1 330 aa17.11■□□□□ 0.33
ATG4B-209ENST00000425239 SREBF1P36956 1147 aa17.11■□□□□ 0.33
ATG4B-209ENST00000425239 EP400NLQ6ZTU2 488 aa17.11■□□□□ 0.33
ATG4B-209ENST00000425239 RASEFQ8IZ41 740 aa17.11■□□□□ 0.33
ATG4B-209ENST00000425239 KLHL23Q8NBE8 558 aa17.11■□□□□ 0.33
ATG4B-209ENST00000425239 TMEM40Q8WWA1 233 aa17.11■□□□□ 0.33
ATG4B-209ENST00000425239 ANO3Q9BYT9 981 aa17.11■□□□□ 0.33
ATG4B-209ENST00000425239 AZI2Q9H6S1 392 aa17.11■□□□□ 0.33
ATG4B-209ENST00000425239 TMEM260Q9NX78 707 aa17.11■□□□□ 0.33
ATG4B-209ENST00000425239 BARHL2Q9NY43 387 aa17.11■□□□□ 0.33
ATG4B-209ENST00000425239 FNDC1Q4ZHG4 1894 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-209ENST00000425239 PLXNA4Q9HCM2 1894 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 IGLV3-22A0A075B6J6 115 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 KLRC1P26715 233 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 CDC27P30260 824 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 SLC26A2P50443 739 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 CLUL1Q15846 466 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 TMEM266Q2M3C6 531 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 ADCK5Q3MIX3 580 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 PPP1R18Q6NYC8 613 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 NEK1Q96PY6 1258 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 SDF4Q9BRK5 362 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 IGFLR1Q9H665 355 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 ERVK-5Q9HDB9 667 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 TRPC6Q9Y210 931 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 FAM50BQ9Y247 325 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 NOC2LQ9Y3T9 749 aaKnown RBP17.1■□□□□ 0.33
ATG4B-209ENST00000425239 ZNF318Q5VUA4 2279 aa17.1■□□□□ 0.33
ATG4B-209ENST00000425239 EVPLQ92817 2033 aa17.09■□□□□ 0.33
ATG4B-209ENST00000425239 SMCO2A6NFE2 343 aa17.09■□□□□ 0.33
ATG4B-209ENST00000425239 GLP2RO95838 553 aa17.09■□□□□ 0.33
ATG4B-209ENST00000425239 SCG2P13521 617 aa17.09■□□□□ 0.33
ATG4B-209ENST00000425239 NAPAP54920 295 aa17.09■□□□□ 0.33
ATG4B-209ENST00000425239 KRT76Q01546 638 aa17.09■□□□□ 0.33
ATG4B-209ENST00000425239 SMAD4Q13485 552 aaKnown RBP17.09■□□□□ 0.33
ATG4B-209ENST00000425239 HERC4Q5GLZ8 1057 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-209ENST00000425239 NIPA1Q7RTP0 329 aa17.09■□□□□ 0.33
ATG4B-209ENST00000425239 CCDC60Q8IWA6 550 aaPredicted RBP17.09■□□□□ 0.33
ATG4B-209ENST00000425239 TNPO1Q92973 898 aaKnown RBP17.09■□□□□ 0.33
ATG4B-209ENST00000425239 TCEANC2Q96MN5 208 aa17.09■□□□□ 0.33
ATG4B-209ENST00000425239 ANO2Q9NQ90 1003 aa17.09■□□□□ 0.33
ATG4B-209ENST00000425239 RBM28Q9NW13 759 aaKnown RBP17.09■□□□□ 0.33
ATG4B-209ENST00000425239 MYO15AQ9UKN7 3530 aa17.09■□□□□ 0.33
ATG4B-209ENST00000425239 DMDP11532 3685 aa17.08■□□□□ 0.33
ATG4B-209ENST00000425239 TECTAO75443 2155 aa17.08■□□□□ 0.33
ATG4B-209ENST00000425239 EDIL3O43854 480 aa17.08■□□□□ 0.32
ATG4B-209ENST00000425239 CYP3A4P08684 503 aa17.08■□□□□ 0.32
ATG4B-209ENST00000425239 FAM189BP81408 668 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms