RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 H3BNC9 293 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 IFNAR1P17181 557 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 ATP4AP20648 1035 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 PSMA5P28066 241 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 CIITAP33076 1130 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 ANAPC15P60006 121 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 FGD1P98174 961 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 SKIV2LQ15477 1246 aaKnown RBP18.39■□□□□ 0.53
DDR1-234ENST00000424544 IER5Q5VY09 327 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 MCTP2Q6DN12 878 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 POTEBQ6S5H4 581 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 PLA2G4DQ86XP0 818 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 NME8Q8N427 588 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 ZNF689Q96CS4 500 aaPredicted RBP18.39■□□□□ 0.53
DDR1-234ENST00000424544 TBC1D32Q96NH3 1257 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 YME1L1Q96TA2 773 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 RNF26Q9BY78 433 aaPredicted RBP18.39■□□□□ 0.53
DDR1-234ENST00000424544 ZSWIM6Q9HCJ5 1215 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 KDM3AQ9Y4C1 1321 aa18.39■□□□□ 0.53
DDR1-234ENST00000424544 COL4A4P53420 1690 aaPredicted RBP18.38■□□□□ 0.53
DDR1-234ENST00000424544 ZBTB42B2RXF5 422 aa18.38■□□□□ 0.53
DDR1-234ENST00000424544 IPO5O00410 1097 aaKnown RBP18.38■□□□□ 0.53
DDR1-234ENST00000424544 UPP2O95045 317 aa18.38■□□□□ 0.53
DDR1-234ENST00000424544 GNA11P29992 359 aa18.38■□□□□ 0.53
DDR1-234ENST00000424544 IGBP1P78318 339 aa18.38■□□□□ 0.53
DDR1-234ENST00000424544 MTHFD1LQ6UB35 978 aa18.38■□□□□ 0.53
DDR1-234ENST00000424544 TSHZ1Q6ZSZ6 1077 aa18.38■□□□□ 0.53
DDR1-234ENST00000424544 TMEM192Q8IY95 271 aa18.38■□□□□ 0.53
DDR1-234ENST00000424544 FBXO22Q8NEZ5 403 aa18.38■□□□□ 0.53
DDR1-234ENST00000424544 CCDC12Q8WUD4 166 aaPredicted RBP18.38■□□□□ 0.53
DDR1-234ENST00000424544 TRAPPC12Q8WVT3 735 aa18.38■□□□□ 0.53
DDR1-234ENST00000424544 LINC01599Q8WXQ3 324 aa18.38■□□□□ 0.53
DDR1-234ENST00000424544 PHKBQ93100 1093 aa18.38■□□□□ 0.53
DDR1-234ENST00000424544 LENG9Q96B70 501 aa18.38■□□□□ 0.53
DDR1-234ENST00000424544 IL17RAQ96F46 866 aa18.38■□□□□ 0.53
DDR1-234ENST00000424544 C6orf50Q9HD87 102 aa18.38■□□□□ 0.53
DDR1-234ENST00000424544 MYO7AQ13402 2215 aa18.38■□□□□ 0.53
DDR1-234ENST00000424544 C5orf67F2Z3F1 127 aa18.37■□□□□ 0.53
DDR1-234ENST00000424544 ZNF76P36508 570 aa18.37■□□□□ 0.53
DDR1-234ENST00000424544 RUFY3Q7L099 469 aa18.37■□□□□ 0.53
DDR1-234ENST00000424544 CCDC60Q8IWA6 550 aaPredicted RBP18.37■□□□□ 0.53
DDR1-234ENST00000424544 REXO1Q8N1G1 1221 aaKnown RBP18.37■□□□□ 0.53
DDR1-234ENST00000424544 ATP8B4Q8TF62 1192 aa18.37■□□□□ 0.53
DDR1-234ENST00000424544 MRPL38Q96DV4 380 aaKnown RBP18.37■□□□□ 0.53
DDR1-234ENST00000424544 NECAB3Q96P71 396 aaPredicted RBP18.37■□□□□ 0.53
DDR1-234ENST00000424544 CELF4Q9BZC1 486 aaKnown RBP18.37■□□□□ 0.53
DDR1-234ENST00000424544 TBC1D22BQ9NU19 505 aa18.37■□□□□ 0.53
DDR1-234ENST00000424544 TRPC6Q9Y210 931 aa18.37■□□□□ 0.53
DDR1-234ENST00000424544 MAFBQ9Y5Q3 323 aaPredicted RBP18.37■□□□□ 0.53
DDR1-234ENST00000424544 IGSF9BQ9UPX0 1349 aa18.37■□□□□ 0.53
DDR1-234ENST00000424544 HBP1O60381 514 aa18.36■□□□□ 0.53
DDR1-234ENST00000424544 DGKIO75912 1065 aa18.36■□□□□ 0.53
DDR1-234ENST00000424544 CD52P31358 61 aa18.36■□□□□ 0.53
DDR1-234ENST00000424544 TOB2Q14106 344 aaPredicted RBP18.36■□□□□ 0.53
DDR1-234ENST00000424544 COL19A1Q14993 1142 aa18.36■□□□□ 0.53
DDR1-234ENST00000424544 FAM43BQ6ZT52 329 aaPredicted RBP18.36■□□□□ 0.53
DDR1-234ENST00000424544 KIAA0319LQ8IZA0 1049 aa18.36■□□□□ 0.53
DDR1-234ENST00000424544 CLP1Q92989 425 aaKnown RBP18.36■□□□□ 0.53
DDR1-234ENST00000424544 TM6SF1Q9BZW5 370 aa18.36■□□□□ 0.53
DDR1-234ENST00000424544 FAM49AQ9H0Q0 323 aaPredicted RBP18.36■□□□□ 0.53
DDR1-234ENST00000424544 NAP1L2Q9ULW6 460 aaPredicted RBP18.36■□□□□ 0.53
DDR1-234ENST00000424544 PADI3Q9ULW8 664 aa18.36■□□□□ 0.53
DDR1-234ENST00000424544 TRPV2Q9Y5S1 764 aa18.36■□□□□ 0.53
DDR1-234ENST00000424544 RB1P06400 928 aa18.35■□□□□ 0.53
DDR1-234ENST00000424544 KLRC1P26715 233 aa18.35■□□□□ 0.53
DDR1-234ENST00000424544 BMPR1AP36894 532 aa18.35■□□□□ 0.53
DDR1-234ENST00000424544 ZNF484Q5JVG2 852 aa18.35■□□□□ 0.53
DDR1-234ENST00000424544 ZNF746Q6NUN9 644 aaPredicted RBP18.35■□□□□ 0.53
DDR1-234ENST00000424544 SWSAP1Q6NVH7 229 aa18.35■□□□□ 0.53
DDR1-234ENST00000424544 FTHL17Q9BXU8 183 aa18.35■□□□□ 0.53
DDR1-234ENST00000424544 ZNF302Q9NR11 478 aa18.35■□□□□ 0.53
DDR1-234ENST00000424544 SH3GLB2Q9NR46 395 aa18.35■□□□□ 0.53
DDR1-234ENST00000424544 DDX39AO00148 427 aaKnown RBP18.34■□□□□ 0.53
DDR1-234ENST00000424544 USP11P51784 963 aa18.34■□□□□ 0.53
DDR1-234ENST00000424544 SETQ01105 290 aaPredicted RBP18.34■□□□□ 0.53
DDR1-234ENST00000424544 TMEM62Q0P6H9 643 aa18.34■□□□□ 0.53
DDR1-234ENST00000424544 GPM6BQ13491 265 aa18.34■□□□□ 0.53
DDR1-234ENST00000424544 FAM160B1Q5W0V3 765 aa18.34■□□□□ 0.53
DDR1-234ENST00000424544 MIS18BP1Q6P0N0 1132 aa18.34■□□□□ 0.53
DDR1-234ENST00000424544 FIBCD1Q8N539 461 aa18.34■□□□□ 0.53
DDR1-234ENST00000424544 RASGRP4Q8TDF6 673 aa18.34■□□□□ 0.53
DDR1-234ENST00000424544 ZNF274Q96GC6 653 aaPredicted RBP18.34■□□□□ 0.53
DDR1-234ENST00000424544 ZNF577Q9BSK1 485 aa18.34■□□□□ 0.53
DDR1-234ENST00000424544 TMX1Q9H3N1 280 aa18.34■□□□□ 0.53
DDR1-234ENST00000424544 NCOA5Q9HCD5 579 aaKnown RBP18.34■□□□□ 0.53
DDR1-234ENST00000424544 PCDHA10Q9Y5I2 948 aa18.34■□□□□ 0.53
DDR1-234ENST00000424544 COL1A2P08123 1366 aa18.33■□□□□ 0.53
DDR1-234ENST00000424544 M0R2N6 131 aa18.33■□□□□ 0.52
DDR1-234ENST00000424544 CCT2P78371 535 aaKnown RBP18.33■□□□□ 0.52
DDR1-234ENST00000424544 KRT76Q01546 638 aa18.33■□□□□ 0.52
DDR1-234ENST00000424544 PDXDC2PQ6P474 469 aa18.33■□□□□ 0.52
DDR1-234ENST00000424544 SMAP1Q8IYB5 467 aaPredicted RBP18.33■□□□□ 0.52
DDR1-234ENST00000424544 IL27Q8NEV9 243 aa18.33■□□□□ 0.52
DDR1-234ENST00000424544 BICD2Q8TD16 824 aa18.33■□□□□ 0.52
DDR1-234ENST00000424544 BBXQ8WY36 941 aaPredicted RBP18.33■□□□□ 0.52
DDR1-234ENST00000424544 SLC26A6Q9BXS9 759 aa18.33■□□□□ 0.52
DDR1-234ENST00000424544 UBE2ZQ9H832 354 aaPredicted RBP18.33■□□□□ 0.52
DDR1-234ENST00000424544 CDHR5Q9HBB8 845 aa18.33■□□□□ 0.52
DDR1-234ENST00000424544 VPS54Q9P1Q0 977 aa18.33■□□□□ 0.52
DDR1-234ENST00000424544 LOXHD1Q8IVV2 1947 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms