RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 BACH1O14867 736 aa21.03■□□□□ 0.96
SREBF1-206ENST00000423161 CCNE2O96020 404 aa21.03■□□□□ 0.96
SREBF1-206ENST00000423161 FAM86B2P0C5J1 330 aa21.03■□□□□ 0.96
SREBF1-206ENST00000423161 CTNNB1P35222 781 aa21.03■□□□□ 0.96
SREBF1-206ENST00000423161 SLC26A2P50443 739 aa21.03■□□□□ 0.96
SREBF1-206ENST00000423161 TMEM62Q0P6H9 643 aa21.03■□□□□ 0.96
SREBF1-206ENST00000423161 CCDC12Q8WUD4 166 aaPredicted RBP21.03■□□□□ 0.96
SREBF1-206ENST00000423161 ZMYND12Q9H0C1 365 aa21.03■□□□□ 0.96
SREBF1-206ENST00000423161 RC3H2Q9HBD1 1191 aaKnown RBP21.03■□□□□ 0.96
SREBF1-206ENST00000423161 SQORQ9Y6N5 450 aa21.03■□□□□ 0.96
SREBF1-206ENST00000423161 IGLV3-22A0A075B6J6 115 aa21.02■□□□□ 0.96
SREBF1-206ENST00000423161 IGKV6D-21A0A0A0MT36 114 aa21.02■□□□□ 0.96
SREBF1-206ENST00000423161 SMIM35A0A1B0GVV1 85 aa21.02■□□□□ 0.96
SREBF1-206ENST00000423161 CYP3A4P08684 503 aa21.02■□□□□ 0.96
SREBF1-206ENST00000423161 COL9A1P20849 921 aa21.02■□□□□ 0.96
SREBF1-206ENST00000423161 KCNA5P22460 613 aa21.02■□□□□ 0.96
SREBF1-206ENST00000423161 PKN1Q16512 942 aa21.02■□□□□ 0.96
SREBF1-206ENST00000423161 FAM160B1Q5W0V3 765 aa21.02■□□□□ 0.96
SREBF1-206ENST00000423161 MCTP2Q6DN12 878 aa21.02■□□□□ 0.96
SREBF1-206ENST00000423161 MTHFD1LQ6UB35 978 aa21.02■□□□□ 0.96
SREBF1-206ENST00000423161 ABHD15Q6UXT9 468 aa21.02■□□□□ 0.96
SREBF1-206ENST00000423161 REXO1Q8N1G1 1221 aaKnown RBP21.02■□□□□ 0.96
SREBF1-206ENST00000423161 CRYGNQ8WXF5 182 aa21.02■□□□□ 0.96
SREBF1-206ENST00000423161 LINC01599Q8WXQ3 324 aa21.02■□□□□ 0.96
SREBF1-206ENST00000423161 CCDC136Q96JN2 1154 aa21.02■□□□□ 0.96
SREBF1-206ENST00000423161 C6orf50Q9HD87 102 aa21.02■□□□□ 0.96
SREBF1-206ENST00000423161 IPO5O00410 1097 aaKnown RBP21.01■□□□□ 0.95
SREBF1-206ENST00000423161 ADAMTS3O15072 1205 aa21.01■□□□□ 0.95
SREBF1-206ENST00000423161 PRPF3O43395 683 aaKnown RBP21.01■□□□□ 0.95
SREBF1-206ENST00000423161 HBP1O60381 514 aa21.01■□□□□ 0.95
SREBF1-206ENST00000423161 RPS6KB1P23443 525 aa21.01■□□□□ 0.95
SREBF1-206ENST00000423161 CCDC60Q8IWA6 550 aaPredicted RBP21.01■□□□□ 0.95
SREBF1-206ENST00000423161 BANK1Q8NDB2 785 aa21.01■□□□□ 0.95
SREBF1-206ENST00000423161 PHKBQ93100 1093 aa21.01■□□□□ 0.95
SREBF1-206ENST00000423161 UIMC1Q96RL1 719 aa21.01■□□□□ 0.95
SREBF1-206ENST00000423161 FTHL17Q9BXU8 183 aa21.01■□□□□ 0.95
SREBF1-206ENST00000423161 CELF4Q9BZC1 486 aaKnown RBP21.01■□□□□ 0.95
SREBF1-206ENST00000423161 RWDD3Q9Y3V2 267 aa21.01■□□□□ 0.95
SREBF1-206ENST00000423161 IGSF9BQ9UPX0 1349 aa21.01■□□□□ 0.95
SREBF1-206ENST00000423161 C5orf67F2Z3F1 127 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 DHX15O43143 795 aaKnown RBP21■□□□□ 0.95
SREBF1-206ENST00000423161 REC8O95072 547 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 LINC00271P0C7V0 271 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 KLRC1P26715 233 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 SETQ01105 290 aaPredicted RBP21■□□□□ 0.95
SREBF1-206ENST00000423161 AKAP17AQ02040 695 aaKnown RBP21■□□□□ 0.95
SREBF1-206ENST00000423161 PAK2Q13177 524 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 BTG3Q14201 252 aaPredicted RBP21■□□□□ 0.95
SREBF1-206ENST00000423161 LEXMQ3ZCV2 418 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 MIS18BP1Q6P0N0 1132 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 PDXDC2PQ6P474 469 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 NME8Q8N427 588 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 FBXL16Q8N461 479 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 ATP8B4Q8TF62 1192 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 ZNF689Q96CS4 500 aaPredicted RBP21■□□□□ 0.95
SREBF1-206ENST00000423161 ZNF577Q9BSK1 485 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 C11orf84Q9BUA3 381 aaPredicted RBP21■□□□□ 0.95
SREBF1-206ENST00000423161 AGXT2Q9BYV1 514 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 ZNF302Q9NR11 478 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 PADI3Q9ULW8 664 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 KDM3AQ9Y4C1 1321 aa21■□□□□ 0.95
SREBF1-206ENST00000423161 COL1A2P08123 1366 aa20.99■□□□□ 0.95
SREBF1-206ENST00000423161 DGKIO75912 1065 aa20.99■□□□□ 0.95
SREBF1-206ENST00000423161 RB1P06400 928 aa20.99■□□□□ 0.95
SREBF1-206ENST00000423161 GNA11P29992 359 aa20.99■□□□□ 0.95
SREBF1-206ENST00000423161 BMPR1AP36894 532 aa20.99■□□□□ 0.95
SREBF1-206ENST00000423161 KRT76Q01546 638 aa20.99■□□□□ 0.95
SREBF1-206ENST00000423161 TCEAL5Q5H9L2 206 aa20.99■□□□□ 0.95
SREBF1-206ENST00000423161 RTN4RL1Q86UN2 441 aaPredicted RBP20.99■□□□□ 0.95
SREBF1-206ENST00000423161 CLP1Q92989 425 aaKnown RBP20.99■□□□□ 0.95
SREBF1-206ENST00000423161 NSUN3Q9H649 340 aaKnown RBP20.99■□□□□ 0.95
SREBF1-206ENST00000423161 FNDC1Q4ZHG4 1894 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-206ENST00000423161 PPFIA3O75145 1194 aa20.98■□□□□ 0.95
SREBF1-206ENST00000423161 PSMA5P28066 241 aa20.98■□□□□ 0.95
SREBF1-206ENST00000423161 SWSAP1Q6NVH7 229 aa20.98■□□□□ 0.95
SREBF1-206ENST00000423161 NPAS4Q8IUM7 802 aa20.98■□□□□ 0.95
SREBF1-206ENST00000423161 CCDC148Q8NFR7 591 aa20.98■□□□□ 0.95
SREBF1-206ENST00000423161 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-206ENST00000423161 RASGRP4Q8TDF6 673 aa20.98■□□□□ 0.95
SREBF1-206ENST00000423161 C1QTNF1Q9BXJ1 281 aa20.98■□□□□ 0.95
SREBF1-206ENST00000423161 RNF26Q9BY78 433 aaPredicted RBP20.98■□□□□ 0.95
SREBF1-206ENST00000423161 TBC1D22BQ9NU19 505 aa20.98■□□□□ 0.95
SREBF1-206ENST00000423161 TCEAL9Q9UHQ7 104 aa20.98■□□□□ 0.95
SREBF1-206ENST00000423161 NTRK3Q16288 839 aa20.97■□□□□ 0.95
SREBF1-206ENST00000423161 TMEM266Q2M3C6 531 aa20.97■□□□□ 0.95
SREBF1-206ENST00000423161 ZNF484Q5JVG2 852 aa20.97■□□□□ 0.95
SREBF1-206ENST00000423161 ZNF746Q6NUN9 644 aaPredicted RBP20.97■□□□□ 0.95
SREBF1-206ENST00000423161 CKAP2LQ8IYA6 745 aa20.97■□□□□ 0.95
SREBF1-206ENST00000423161 BICD2Q8TD16 824 aa20.97■□□□□ 0.95
SREBF1-206ENST00000423161 SLC26A6Q9BXS9 759 aa20.97■□□□□ 0.95
SREBF1-206ENST00000423161 LMAN2LQ9H0V9 348 aa20.97■□□□□ 0.95
SREBF1-206ENST00000423161 GINS2Q9Y248 185 aa20.97■□□□□ 0.95
SREBF1-206ENST00000423161 GRM6O15303 877 aa20.96■□□□□ 0.95
SREBF1-206ENST00000423161 STAG3L1P0CL83 205 aa20.96■□□□□ 0.95
SREBF1-206ENST00000423161 IFNAR1P17181 557 aa20.96■□□□□ 0.95
SREBF1-206ENST00000423161 ATP4AP20648 1035 aa20.96■□□□□ 0.95
SREBF1-206ENST00000423161 CCT2P78371 535 aaKnown RBP20.96■□□□□ 0.95
SREBF1-206ENST00000423161 PRR16Q569H4 304 aa20.96■□□□□ 0.95
SREBF1-206ENST00000423161 PTCRAQ6ISU1 281 aaPredicted RBP20.96■□□□□ 0.95
SREBF1-206ENST00000423161 EP400NLQ6ZTU2 488 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms