RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 ZNF507Q8TCN5 953 aa14.54□□□□□ -0.08
COL20A1-203ENST00000422202 ZC3H15Q8WU90 426 aaKnown RBP14.54□□□□□ -0.08
COL20A1-203ENST00000422202 POU5F1BQ06416 359 aa14.54□□□□□ -0.08
COL20A1-203ENST00000422202 LRRC41Q15345 812 aa14.54□□□□□ -0.08
COL20A1-203ENST00000422202 OTUB1Q96FW1 271 aaPredicted RBP14.54□□□□□ -0.08
COL20A1-203ENST00000422202 TUBGCP2Q9BSJ2 902 aa14.54□□□□□ -0.08
COL20A1-203ENST00000422202 SP110Q9HB58 689 aa14.54□□□□□ -0.08
COL20A1-203ENST00000422202 C6orf203Q9P0P8 240 aaPredicted RBP14.54□□□□□ -0.08
COL20A1-203ENST00000422202 HEY1Q9Y5J3 304 aa14.54□□□□□ -0.08
COL20A1-203ENST00000422202 AP1B1Q10567 949 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 CATSPER3Q86XQ3 398 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 SPATS2Q86XZ4 545 aaKnown RBP14.53□□□□□ -0.08
COL20A1-203ENST00000422202 FAM133AQ8N9E0 248 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 KDM4CQ9H3R0 1056 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 GINM1Q9NU53 330 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 PPP2R2CQ9Y2T4 447 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 IQANK1A0A1B0GTG1 560 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 EPN1Q9Y6I3 576 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-203ENST00000422202 UBA6A0AVT1 1052 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-203ENST00000422202 ORC4O43929 436 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 CCT5P48643 541 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 ZBTB38Q8NAP3 1195 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-203ENST00000422202 OTUD7AQ8TE49 926 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-203ENST00000422202 LARP4BQ92615 738 aaKnown RBP14.53□□□□□ -0.08
COL20A1-203ENST00000422202 EDC3Q96F86 508 aaKnown RBP14.53□□□□□ -0.08
COL20A1-203ENST00000422202 NGRNQ9NPE2 291 aaKnown RBP14.53□□□□□ -0.08
COL20A1-203ENST00000422202 HPS4Q9NQG7 708 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 ZFP42Q96MM3 310 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 WARS2Q9UGM6 360 aaKnown RBP14.53□□□□□ -0.08
COL20A1-203ENST00000422202 JRKLQ9Y4A0 524 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 SOS2Q07890 1332 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-203ENST00000422202 CAPZA2P47755 286 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 SYDE2Q5VT97 1194 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 CATSPER4Q7RTX7 472 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 TRIML2Q8N7C3 387 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 TTC8Q8TAM2 541 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 PCDHA5Q9Y5H7 936 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 GTPBP6O43824 516 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-203ENST00000422202 ESRRAP11474 423 aaPredicted RBP14.53□□□□□ -0.08
COL20A1-203ENST00000422202 AARSP49588 968 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL20A1-203ENST00000422202 HDLBPQ00341 1268 aaKnown RBP14.53□□□□□ -0.08
COL20A1-203ENST00000422202 STX19Q8N4C7 294 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 GIMAP4Q9NUV9 329 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 DNAJC17Q9NVM6 304 aaKnown RBP14.53□□□□□ -0.08
COL20A1-203ENST00000422202 SEL1LQ9UBV2 794 aa14.53□□□□□ -0.08
COL20A1-203ENST00000422202 NEURL1BA8MQ27 555 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 PJA2O43164 708 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 FOSP01100 380 aaPredicted RBP14.52□□□□□ -0.08
COL20A1-203ENST00000422202 PASD1Q8IV76 773 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 VPS39Q96JC1 886 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 CENPKQ9BS16 269 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 GOLGA8IPA6NC78 632 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 GOLGA8JA6NMD2 632 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 UBE3AQ05086 875 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 ME3Q16798 604 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 GRAMD4Q6IC98 578 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 ZNF341Q9BYN7 854 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 VGLL3A8MV65 326 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 ASMTLO95671 621 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 CA4P22748 312 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 NDUFA8P51970 172 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 SURF1Q15526 300 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 MTBPQ96DY7 904 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 TRAF3IP3Q9Y228 551 aa14.52□□□□□ -0.08
COL20A1-203ENST00000422202 ERICH1Q86X53 443 aa14.52□□□□□ -0.09
COL20A1-203ENST00000422202 IFNLR1Q8IU57 520 aaPredicted RBP14.52□□□□□ -0.09
COL20A1-203ENST00000422202 ZBTB40Q9NUA8 1239 aa14.52□□□□□ -0.09
COL20A1-203ENST00000422202 GOLGA8MH3BSY2 632 aa14.52□□□□□ -0.09
COL20A1-203ENST00000422202 TAS2R42Q7RTR8 314 aa14.52□□□□□ -0.09
COL20A1-203ENST00000422202 PARVGQ9HBI0 331 aa14.52□□□□□ -0.09
COL20A1-203ENST00000422202 FANCLQ9NW38 375 aa14.52□□□□□ -0.09
COL20A1-203ENST00000422202 E9PMD0 336 aa14.52□□□□□ -0.09
COL20A1-203ENST00000422202 RLBP1P12271 317 aa14.52□□□□□ -0.09
COL20A1-203ENST00000422202 CYP27A1Q02318 531 aa14.52□□□□□ -0.09
COL20A1-203ENST00000422202 RASGRP4Q8TDF6 673 aa14.52□□□□□ -0.09
COL20A1-203ENST00000422202 CLIC4Q9Y696 253 aa14.52□□□□□ -0.09
COL20A1-203ENST00000422202 MYO1DO94832 1006 aa14.52□□□□□ -0.09
COL20A1-203ENST00000422202 TJP3O95049 919 aa14.52□□□□□ -0.09
COL20A1-203ENST00000422202 E2F5Q15329 346 aa14.52□□□□□ -0.09
COL20A1-203ENST00000422202 THOC2Q8NI27 1593 aaKnown RBP14.52□□□□□ -0.09
COL20A1-203ENST00000422202 MAP3K1Q13233 1512 aa14.51□□□□□ -0.09
COL20A1-203ENST00000422202 MAP3K15Q6ZN16 1313 aa14.51□□□□□ -0.09
COL20A1-203ENST00000422202 PNMA6EA0A0J9YXQ4 647 aa14.51□□□□□ -0.09
COL20A1-203ENST00000422202 WBP4O75554 376 aaKnown RBP14.51□□□□□ -0.09
COL20A1-203ENST00000422202 SLC9A1P19634 815 aa14.51□□□□□ -0.09
COL20A1-203ENST00000422202 GPATCH4Q5T3I0 446 aaKnown RBP14.51□□□□□ -0.09
COL20A1-203ENST00000422202 THOC1Q96FV9 657 aaKnown RBP14.51□□□□□ -0.09
COL20A1-203ENST00000422202 TESK2Q96S53 571 aa14.51□□□□□ -0.09
COL20A1-203ENST00000422202 SLAIN2Q9P270 581 aa14.51□□□□□ -0.09
COL20A1-203ENST00000422202 MAP3K19Q56UN5 1328 aa14.51□□□□□ -0.09
COL20A1-203ENST00000422202 KRT8P05787 483 aa14.51□□□□□ -0.09
COL20A1-203ENST00000422202 POLE2P56282 527 aa14.51□□□□□ -0.09
COL20A1-203ENST00000422202 ZNF394Q53GI3 561 aa14.51□□□□□ -0.09
COL20A1-203ENST00000422202 CC2D1AQ6P1N0 951 aaPredicted RBP14.51□□□□□ -0.09
COL20A1-203ENST00000422202 SMYD4Q8IYR2 804 aaPredicted RBP14.51□□□□□ -0.09
COL20A1-203ENST00000422202 XDHP47989 1333 aa14.51□□□□□ -0.09
COL20A1-203ENST00000422202 BMP3P12645 472 aa14.51□□□□□ -0.09
COL20A1-203ENST00000422202 HOXA13P31271 388 aaPredicted RBP14.51□□□□□ -0.09
COL20A1-203ENST00000422202 COPB1P53618 953 aaKnown RBP14.51□□□□□ -0.09
COL20A1-203ENST00000422202 RASSF3Q86WH2 238 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms