RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 PEX11GQ96HA9 241 aa6.82□□□□□ -1.32
SFXN1-202ENST00000421887 FCRL3Q96P31 734 aaPredicted RBP6.82□□□□□ -1.32
SFXN1-202ENST00000421887 CDK5RAP1Q96SZ6 601 aaKnown RBP6.82□□□□□ -1.32
SFXN1-202ENST00000421887 SRRTQ9BXP5 876 aaKnown RBP6.82□□□□□ -1.32
SFXN1-202ENST00000421887 LRRC3Q9BY71 257 aa6.82□□□□□ -1.32
SFXN1-202ENST00000421887 KLC2Q9H0B6 622 aa6.82□□□□□ -1.32
SFXN1-202ENST00000421887 RWDD3Q9Y3V2 267 aa6.82□□□□□ -1.32
SFXN1-202ENST00000421887 SUPT16HQ9Y5B9 1047 aaKnown RBP6.82□□□□□ -1.32
SFXN1-202ENST00000421887 SMG6Q86US8 1419 aaKnown RBP6.82□□□□□ -1.32
SFXN1-202ENST00000421887 MEGF6O75095 1541 aa6.81□□□□□ -1.32
SFXN1-202ENST00000421887 VIRMAQ69YN4 1812 aaKnown RBP6.81□□□□□ -1.32
SFXN1-202ENST00000421887 CYP2C8P10632 490 aa6.81□□□□□ -1.32
SFXN1-202ENST00000421887 MAP2K1Q02750 393 aaPredicted RBP6.81□□□□□ -1.32
SFXN1-202ENST00000421887 KLF10Q13118 480 aa6.81□□□□□ -1.32
SFXN1-202ENST00000421887 ICAM4Q14773 271 aa6.81□□□□□ -1.32
SFXN1-202ENST00000421887 ZNF585AQ6P3V2 769 aa6.81□□□□□ -1.32
SFXN1-202ENST00000421887 LINC00482Q8N8I6 264 aa6.81□□□□□ -1.32
SFXN1-202ENST00000421887 SLC9A7Q96T83 725 aa6.81□□□□□ -1.32
SFXN1-202ENST00000421887 SYT3Q9BQG1 590 aa6.81□□□□□ -1.32
SFXN1-202ENST00000421887 SUCOQ9UBS9 1254 aaKnown RBP6.81□□□□□ -1.32
SFXN1-202ENST00000421887 ANKRD33BA6NCL7 494 aa6.8□□□□□ -1.32
SFXN1-202ENST00000421887 TNFRSF10CO14798 259 aa6.8□□□□□ -1.32
SFXN1-202ENST00000421887 SHOXO15266 292 aa6.8□□□□□ -1.32
SFXN1-202ENST00000421887 CD3EP07766 207 aa6.8□□□□□ -1.32
SFXN1-202ENST00000421887 IFNGR1P15260 489 aa6.8□□□□□ -1.32
SFXN1-202ENST00000421887 KCNA3P22001 575 aa6.8□□□□□ -1.32
SFXN1-202ENST00000421887 RPL13P26373 211 aaKnown RBP6.8□□□□□ -1.32
SFXN1-202ENST00000421887 HOXC9P31274 260 aa6.8□□□□□ -1.32
SFXN1-202ENST00000421887 SLC9A5Q14940 896 aa6.8□□□□□ -1.32
SFXN1-202ENST00000421887 SEZ6Q53EL9 994 aa6.8□□□□□ -1.32
SFXN1-202ENST00000421887 TDRD10Q5VZ19 366 aaKnown RBP6.8□□□□□ -1.32
SFXN1-202ENST00000421887 TMC4Q7Z404 712 aa6.8□□□□□ -1.32
SFXN1-202ENST00000421887 LZTR1Q8N653 840 aa6.8□□□□□ -1.32
SFXN1-202ENST00000421887 GORASP1Q9BQQ3 440 aa6.8□□□□□ -1.32
SFXN1-202ENST00000421887 TMOD3Q9NYL9 352 aa6.8□□□□□ -1.32
SFXN1-202ENST00000421887 ING1Q9UK53 422 aaPredicted RBP6.8□□□□□ -1.32
SFXN1-202ENST00000421887 MAP2P11137 1827 aaKnown RBP6.79□□□□□ -1.32
SFXN1-202ENST00000421887 HSPA8P11142 646 aaKnown RBP6.79□□□□□ -1.32
SFXN1-202ENST00000421887 THBS2P35442 1172 aa6.79□□□□□ -1.32
SFXN1-202ENST00000421887 EIF4A3P38919 411 aaKnown RBP6.79□□□□□ -1.32
SFXN1-202ENST00000421887 CRKP46108 304 aa6.79□□□□□ -1.32
SFXN1-202ENST00000421887 FAM26FQ5R3K3 315 aa6.79□□□□□ -1.32
SFXN1-202ENST00000421887 STK32CQ86UX6 486 aa6.79□□□□□ -1.32
SFXN1-202ENST00000421887 PIGBQ92521 554 aa6.79□□□□□ -1.32
SFXN1-202ENST00000421887 DHRS1Q96LJ7 313 aa6.79□□□□□ -1.32
SFXN1-202ENST00000421887 C11orf84Q9BUA3 381 aaPredicted RBP6.79□□□□□ -1.32
SFXN1-202ENST00000421887 DEF6Q9H4E7 631 aa6.79□□□□□ -1.32
SFXN1-202ENST00000421887 COPRSQ9NQ92 184 aa6.79□□□□□ -1.32
SFXN1-202ENST00000421887 TERF2IPQ9NYB0 399 aa6.79□□□□□ -1.32
SFXN1-202ENST00000421887 FBLN5Q9UBX5 448 aa6.79□□□□□ -1.32
SFXN1-202ENST00000421887 DICER1Q9UPY3 1922 aaKnown RBP6.78□□□□□ -1.32
SFXN1-202ENST00000421887 LAMTOR5O43504 91 aa6.78□□□□□ -1.32
SFXN1-202ENST00000421887 GYS1P13807 737 aa6.78□□□□□ -1.32
SFXN1-202ENST00000421887 CHRNA5P30532 468 aa6.78□□□□□ -1.32
SFXN1-202ENST00000421887 ZNF445P59923 1031 aa6.78□□□□□ -1.32
SFXN1-202ENST00000421887 DEFB115Q30KQ5 88 aa6.78□□□□□ -1.32
SFXN1-202ENST00000421887 LRRFIP1Q32MZ4 808 aaKnown RBP6.78□□□□□ -1.32
SFXN1-202ENST00000421887 NBPF6Q5VWK0 638 aa6.78□□□□□ -1.32
SFXN1-202ENST00000421887 DCAF15Q66K64 600 aa6.78□□□□□ -1.32
SFXN1-202ENST00000421887 FIBCD1Q8N539 461 aa6.78□□□□□ -1.32
SFXN1-202ENST00000421887 TXNDC5Q8NBS9 432 aaKnown RBP6.78□□□□□ -1.32
SFXN1-202ENST00000421887 USP33Q8TEY7 942 aa6.78□□□□□ -1.32
SFXN1-202ENST00000421887 COG3Q96JB2 828 aa6.78□□□□□ -1.32
SFXN1-202ENST00000421887 NBPF4Q96M43 638 aa6.78□□□□□ -1.32
SFXN1-202ENST00000421887 PPP4R1LQ9P1A2 415 aa6.78□□□□□ -1.32
SFXN1-202ENST00000421887 PDE4DIPQ5VU43 2346 aa6.78□□□□□ -1.32
SFXN1-202ENST00000421887 CD163L1Q9NR16 1453 aa6.78□□□□□ -1.32
SFXN1-202ENST00000421887 MAP3K19Q56UN5 1328 aa6.77□□□□□ -1.32
SFXN1-202ENST00000421887 EDC4Q6P2E9 1401 aaKnown RBP6.77□□□□□ -1.33
SFXN1-202ENST00000421887 IQCA1LA6NCM1 817 aa6.77□□□□□ -1.33
SFXN1-202ENST00000421887 NPEPPSL1A6NEC2 478 aa6.77□□□□□ -1.33
SFXN1-202ENST00000421887 DDX3XO00571 662 aaKnown RBP eCLIP6.77□□□□□ -1.33
SFXN1-202ENST00000421887 SORBS3O60504 671 aa6.77□□□□□ -1.33
SFXN1-202ENST00000421887 GREM1O60565 184 aa6.77□□□□□ -1.33
SFXN1-202ENST00000421887 C8BP07358 591 aa6.77□□□□□ -1.33
SFXN1-202ENST00000421887 ITPK1Q13572 414 aa6.77□□□□□ -1.33
SFXN1-202ENST00000421887 NETO2Q8NC67 525 aa6.77□□□□□ -1.33
SFXN1-202ENST00000421887 NOL6Q9H6R4 1146 aaKnown RBP6.77□□□□□ -1.33
SFXN1-202ENST00000421887 GP6Q9HCN6 339 aa6.77□□□□□ -1.33
SFXN1-202ENST00000421887 FAM86C1Q9NVL1 165 aa6.77□□□□□ -1.33
SFXN1-202ENST00000421887 VTI1BQ9UEU0 232 aa6.77□□□□□ -1.33
SFXN1-202ENST00000421887 ABT1Q9ULW3 272 aaKnown RBP6.77□□□□□ -1.33
SFXN1-202ENST00000421887 SF3B6Q9Y3B4 125 aaKnown RBP6.77□□□□□ -1.33
SFXN1-202ENST00000421887 SBNO2Q9Y2G9 1366 aa6.77□□□□□ -1.33
SFXN1-202ENST00000421887 KDM6AO15550 1401 aaPredicted RBP6.76□□□□□ -1.33
SFXN1-202ENST00000421887 CYP27B1O15528 508 aa6.76□□□□□ -1.33
SFXN1-202ENST00000421887 POU4F1Q01851 419 aa6.76□□□□□ -1.33
SFXN1-202ENST00000421887 TTLL6Q8N841 843 aa6.76□□□□□ -1.33
SFXN1-202ENST00000421887 KYQ8NBH2 561 aa6.76□□□□□ -1.33
SFXN1-202ENST00000421887 ZNF296Q8WUU4 475 aaPredicted RBP6.76□□□□□ -1.33
SFXN1-202ENST00000421887 LCORQ96JN0 433 aaPredicted RBP6.76□□□□□ -1.33
SFXN1-202ENST00000421887 ZDHHC15Q96MV8 337 aa6.76□□□□□ -1.33
SFXN1-202ENST00000421887 UBP1Q9NZI7 540 aa6.76□□□□□ -1.33
SFXN1-202ENST00000421887 ASAP1Q9ULH1 1129 aa6.76□□□□□ -1.33
SFXN1-202ENST00000421887 SIT1Q9Y3P8 196 aa6.76□□□□□ -1.33
SFXN1-202ENST00000421887 RAB3GAP2Q9H2M9 1393 aa6.76□□□□□ -1.33
SFXN1-202ENST00000421887 SCN4AP35499 1836 aa6.76□□□□□ -1.33
SFXN1-202ENST00000421887 WDR33Q9C0J8 1336 aaKnown RBP6.76□□□□□ -1.33
SFXN1-202ENST00000421887 RTL1A6NKG5 1358 aa6.75□□□□□ -1.33
SFXN1-202ENST00000421887 RPS6KA4O75676 772 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms