RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 RTN4RL1Q86UN2 441 aaPredicted RBP21.53■■□□□ 1.04
VARS2-202ENST00000421263 NME8Q8N427 588 aa21.53■■□□□ 1.04
VARS2-202ENST00000421263 TRAPPC12Q8WVT3 735 aa21.53■■□□□ 1.04
VARS2-202ENST00000421263 TRPC6Q9Y210 931 aa21.53■■□□□ 1.04
VARS2-202ENST00000421263 SMIM35A0A1B0GVV1 85 aa21.52■■□□□ 1.04
VARS2-202ENST00000421263 C5orf67F2Z3F1 127 aa21.52■■□□□ 1.04
VARS2-202ENST00000421263 RPS6KB1P23443 525 aa21.52■■□□□ 1.04
VARS2-202ENST00000421263 EVCP57679 992 aa21.52■■□□□ 1.04
VARS2-202ENST00000421263 MTHFD1LQ6UB35 978 aa21.52■■□□□ 1.04
VARS2-202ENST00000421263 PLA2G4DQ86XP0 818 aa21.52■■□□□ 1.04
VARS2-202ENST00000421263 FIBCD1Q8N539 461 aa21.52■■□□□ 1.04
VARS2-202ENST00000421263 FAM49AQ9H0Q0 323 aaPredicted RBP21.52■■□□□ 1.04
VARS2-202ENST00000421263 UBE2ZQ9H832 354 aaPredicted RBP21.52■■□□□ 1.04
VARS2-202ENST00000421263 C6orf50Q9HD87 102 aa21.52■■□□□ 1.04
VARS2-202ENST00000421263 NAP1L2Q9ULW6 460 aaPredicted RBP21.52■■□□□ 1.04
VARS2-202ENST00000421263 TRPV2Q9Y5S1 764 aa21.52■■□□□ 1.04
VARS2-202ENST00000421263 KDM3AQ9Y4C1 1321 aa21.52■■□□□ 1.03
VARS2-202ENST00000421263 HBP1O60381 514 aa21.51■■□□□ 1.03
VARS2-202ENST00000421263 RB1P06400 928 aa21.51■■□□□ 1.03
VARS2-202ENST00000421263 CD52P31358 61 aa21.51■■□□□ 1.03
VARS2-202ENST00000421263 LEXMQ3ZCV2 418 aa21.51■■□□□ 1.03
VARS2-202ENST00000421263 CCDC12Q8WUD4 166 aaPredicted RBP21.51■■□□□ 1.03
VARS2-202ENST00000421263 LINC01599Q8WXQ3 324 aa21.51■■□□□ 1.03
VARS2-202ENST00000421263 CLP1Q92989 425 aaKnown RBP21.51■■□□□ 1.03
VARS2-202ENST00000421263 FTHL17Q9BXU8 183 aa21.51■■□□□ 1.03
VARS2-202ENST00000421263 CELF4Q9BZC1 486 aaKnown RBP21.51■■□□□ 1.03
VARS2-202ENST00000421263 RALGAPA2Q2PPJ7 1873 aa21.51■■□□□ 1.03
VARS2-202ENST00000421263 NLRC5Q86WI3 1866 aa21.51■■□□□ 1.03
VARS2-202ENST00000421263 IGSF9BQ9UPX0 1349 aa21.51■■□□□ 1.03
VARS2-202ENST00000421263 IPO5O00410 1097 aaKnown RBP21.5■■□□□ 1.03
VARS2-202ENST00000421263 DGKIO75912 1065 aa21.5■■□□□ 1.03
VARS2-202ENST00000421263 ATP4AP20648 1035 aa21.5■■□□□ 1.03
VARS2-202ENST00000421263 KLRC1P26715 233 aa21.5■■□□□ 1.03
VARS2-202ENST00000421263 BMPR1AP36894 532 aa21.5■■□□□ 1.03
VARS2-202ENST00000421263 CCDC60Q8IWA6 550 aaPredicted RBP21.5■■□□□ 1.03
VARS2-202ENST00000421263 PADI3Q9ULW8 664 aa21.5■■□□□ 1.03
VARS2-202ENST00000421263 DDX39AO00148 427 aaKnown RBP21.49■■□□□ 1.03
VARS2-202ENST00000421263 EPB41L2O43491 1005 aaKnown RBP21.49■■□□□ 1.03
VARS2-202ENST00000421263 GNA11P29992 359 aa21.49■■□□□ 1.03
VARS2-202ENST00000421263 CIITAP33076 1130 aa21.49■■□□□ 1.03
VARS2-202ENST00000421263 COL19A1Q14993 1142 aa21.49■■□□□ 1.03
VARS2-202ENST00000421263 FAM160B1Q5W0V3 765 aa21.49■■□□□ 1.03
VARS2-202ENST00000421263 FAM43BQ6ZT52 329 aaPredicted RBP21.49■■□□□ 1.03
VARS2-202ENST00000421263 REXO1Q8N1G1 1221 aaKnown RBP21.49■■□□□ 1.03
VARS2-202ENST00000421263 BANK1Q8NDB2 785 aa21.49■■□□□ 1.03
VARS2-202ENST00000421263 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.49■■□□□ 1.03
VARS2-202ENST00000421263 ATP8B4Q8TF62 1192 aa21.49■■□□□ 1.03
VARS2-202ENST00000421263 CCDC136Q96JN2 1154 aa21.49■■□□□ 1.03
VARS2-202ENST00000421263 RNF26Q9BY78 433 aaPredicted RBP21.49■■□□□ 1.03
VARS2-202ENST00000421263 TBC1D22BQ9NU19 505 aa21.49■■□□□ 1.03
VARS2-202ENST00000421263 RWDD3Q9Y3V2 267 aa21.49■■□□□ 1.03
VARS2-202ENST00000421263 ADGRA3Q8IWK6 1321 aa21.49■■□□□ 1.03
VARS2-202ENST00000421263 M0QZ92 97 aa21.48■■□□□ 1.03
VARS2-202ENST00000421263 EDIL3O43854 480 aa21.48■■□□□ 1.03
VARS2-202ENST00000421263 REC8O95072 547 aa21.48■■□□□ 1.03
VARS2-202ENST00000421263 IFNAR1P17181 557 aa21.48■■□□□ 1.03
VARS2-202ENST00000421263 PSMA5P28066 241 aa21.48■■□□□ 1.03
VARS2-202ENST00000421263 PDIA3P30101 505 aaKnown RBP21.48■■□□□ 1.03
VARS2-202ENST00000421263 TMEM62Q0P6H9 643 aa21.48■■□□□ 1.03
VARS2-202ENST00000421263 TIGD5Q53EQ6 642 aa21.48■■□□□ 1.03
VARS2-202ENST00000421263 ZNF484Q5JVG2 852 aa21.48■■□□□ 1.03
VARS2-202ENST00000421263 SWSAP1Q6NVH7 229 aa21.48■■□□□ 1.03
VARS2-202ENST00000421263 MIS18BP1Q6P0N0 1132 aa21.48■■□□□ 1.03
VARS2-202ENST00000421263 KIAA0319LQ8IZA0 1049 aa21.48■■□□□ 1.03
VARS2-202ENST00000421263 NEK9Q8TD19 979 aa21.48■■□□□ 1.03
VARS2-202ENST00000421263 PHKBQ93100 1093 aa21.48■■□□□ 1.03
VARS2-202ENST00000421263 ZNF302Q9NR11 478 aa21.48■■□□□ 1.03
VARS2-202ENST00000421263 MAFBQ9Y5Q3 323 aaPredicted RBP21.48■■□□□ 1.03
VARS2-202ENST00000421263 COL1A2P08123 1366 aa21.48■■□□□ 1.03
VARS2-202ENST00000421263 LOXHD1Q8IVV2 1947 aa21.47■■□□□ 1.03
VARS2-202ENST00000421263 ZBTB42B2RXF5 422 aa21.47■■□□□ 1.03
VARS2-202ENST00000421263 BACH1O14867 736 aa21.47■■□□□ 1.03
VARS2-202ENST00000421263 SETQ01105 290 aaPredicted RBP21.47■■□□□ 1.03
VARS2-202ENST00000421263 KRT76Q01546 638 aa21.47■■□□□ 1.03
VARS2-202ENST00000421263 ZNF746Q6NUN9 644 aaPredicted RBP21.47■■□□□ 1.03
VARS2-202ENST00000421263 PDXDC2PQ6P474 469 aa21.47■■□□□ 1.03
VARS2-202ENST00000421263 ZNF577Q9BSK1 485 aa21.47■■□□□ 1.03
VARS2-202ENST00000421263 LMAN2LQ9H0V9 348 aa21.47■■□□□ 1.03
VARS2-202ENST00000421263 COL9A1P20849 921 aa21.46■■□□□ 1.03
VARS2-202ENST00000421263 KCNA5P22460 613 aa21.46■■□□□ 1.03
VARS2-202ENST00000421263 CTNNB1P35222 781 aa21.46■■□□□ 1.03
VARS2-202ENST00000421263 BTG3Q14201 252 aaPredicted RBP21.46■■□□□ 1.03
VARS2-202ENST00000421263 TCEAL5Q5H9L2 206 aa21.46■■□□□ 1.03
VARS2-202ENST00000421263 SMAP1Q8IYB5 467 aaPredicted RBP21.46■■□□□ 1.03
VARS2-202ENST00000421263 C11orf84Q9BUA3 381 aaPredicted RBP21.46■■□□□ 1.03
VARS2-202ENST00000421263 TMX1Q9H3N1 280 aa21.46■■□□□ 1.03
VARS2-202ENST00000421263 NSUN3Q9H649 340 aaKnown RBP21.46■■□□□ 1.03
VARS2-202ENST00000421263 ZSWIM6Q9HCJ5 1215 aa21.46■■□□□ 1.03
VARS2-202ENST00000421263 GRM6O15303 877 aa21.45■■□□□ 1.02
VARS2-202ENST00000421263 AKAP17AQ02040 695 aaKnown RBP21.45■■□□□ 1.02
VARS2-202ENST00000421263 PAK2Q13177 524 aa21.45■■□□□ 1.02
VARS2-202ENST00000421263 RUFY3Q7L099 469 aa21.45■■□□□ 1.02
VARS2-202ENST00000421263 NPAS4Q8IUM7 802 aa21.45■■□□□ 1.02
VARS2-202ENST00000421263 CMTR2Q8IYT2 770 aaKnown RBP21.45■■□□□ 1.02
VARS2-202ENST00000421263 BICD2Q8TD16 824 aa21.45■■□□□ 1.02
VARS2-202ENST00000421263 BBXQ8WY36 941 aaPredicted RBP21.45■■□□□ 1.02
VARS2-202ENST00000421263 LENG9Q96B70 501 aa21.45■■□□□ 1.02
VARS2-202ENST00000421263 PABPC5Q96DU9 382 aaKnown RBP21.45■■□□□ 1.02
VARS2-202ENST00000421263 UIMC1Q96RL1 719 aa21.45■■□□□ 1.02
VARS2-202ENST00000421263 PLVAPQ9BX97 442 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms