RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 SYCP3Q8IZU3 236 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 SH2D4AQ9H788 454 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 ANKZF1Q9H8Y5 726 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 MYO1AQ9UBC5 1043 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 TCEAL9Q9UHQ7 104 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 TMEM150BA6NC51 233 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 TACC1O75410 805 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 AKAP3O75969 853 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 XRCC5P13010 732 aaKnown RBP12.04□□□□□ -0.48
DDX56-203ENST00000421223 KLHL30Q0D2K2 578 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 WHAMMP3Q1A5X7 153 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 LONRF2Q1L5Z9 754 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 GRIPAP1Q4V328 841 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 ODR4Q5SWX8 454 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 MOXD1Q6UVY6 613 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 IL31RAQ8NI17 732 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 BAP1Q92560 729 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 PSMD1Q99460 953 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 TAOK3Q9H2K8 898 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 UNC45AQ9H3U1 944 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 EHD2Q9NZN4 543 aa12.04□□□□□ -0.48
DDX56-203ENST00000421223 WRAP73Q9P2S5 460 aaPredicted RBP12.04□□□□□ -0.48
DDX56-203ENST00000421223 EYA4O95677 639 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 NR3C1P04150 777 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 VSNL1P62760 191 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 DALRD3Q5D0E6 543 aaKnown RBP12.03□□□□□ -0.48
DDX56-203ENST00000421223 MCTP2Q6DN12 878 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 GJB7Q6PEY0 223 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 TRIM59Q8IWR1 403 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 A0A1W2PQJ5 194 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 ARHGEF35A5YM69 484 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 CHRM1P11229 460 aaPredicted RBP12.03□□□□□ -0.48
DDX56-203ENST00000421223 CIITAP33076 1130 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 HOXD13P35453 343 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 PRELPP51888 382 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 GYS2P54840 703 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 SPP2Q13103 211 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 MTMR2Q13614 643 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 FAM178BQ8IXR5 827 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 EHBP1Q8NDI1 1231 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 CEP63Q96MT8 703 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 LXNQ9BS40 222 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 EHMT1Q9H9B1 1298 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 ABCB6Q9NP58 842 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 COL20A1Q9P218 1284 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 CALUO43852 315 aaPredicted RBP12.03□□□□□ -0.48
DDX56-203ENST00000421223 NOL4O94818 638 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 GNA14O95837 355 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 TNNT3P45378 269 aaPredicted RBP12.03□□□□□ -0.48
DDX56-203ENST00000421223 PLA2G4AP47712 749 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 C2orf54Q08AI8 447 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 TRAF1Q13077 416 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 FIGNQ5HY92 759 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 NFRKBQ6P4R8 1299 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 MIER3Q7Z3K6 550 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 TEKT3Q9BXF9 490 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 RANBP17Q9H2T7 1088 aaKnown RBP12.03□□□□□ -0.48
DDX56-203ENST00000421223 PCIF1Q9H4Z3 704 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 SALL4Q9UJQ4 1053 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 FEM1BQ9UK73 627 aa12.03□□□□□ -0.48
DDX56-203ENST00000421223 PITPNM2Q9BZ72 1349 aa12.02□□□□□ -0.48
DDX56-203ENST00000421223 TESPA1A2RU30 521 aaPredicted RBP12.02□□□□□ -0.49
DDX56-203ENST00000421223 ERICH4A6NGS2 130 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 PHACTR2O75167 634 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 PSMD10O75832 226 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 TBC1D8O95759 1140 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 EPB41P11171 864 aaKnown RBP12.02□□□□□ -0.49
DDX56-203ENST00000421223 EXOC3L4Q17RC7 722 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 CCDC181Q5TID7 509 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 FAM160B2Q86V87 743 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 ZKSCAN4Q969J2 545 aaPredicted RBP12.02□□□□□ -0.49
DDX56-203ENST00000421223 HSD17B14Q9BPX1 270 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 PACSIN2Q9UNF0 486 aaPredicted RBP12.02□□□□□ -0.49
DDX56-203ENST00000421223 TLR2O60603 784 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 ITGB5P18084 799 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 MMP14P50281 582 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 AMPD2Q01433 879 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 ASIC2Q16515 512 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 MUM1L1Q5H9M0 696 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 NBPF12Q5TAG4 269 aaPredicted RBP12.02□□□□□ -0.49
DDX56-203ENST00000421223 TRAPPC11Q7Z392 1133 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 MICALL2Q8IY33 904 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 GSPT2Q8IYD1 628 aaKnown RBP12.02□□□□□ -0.49
DDX56-203ENST00000421223 AGBL3Q8NEM8 1001 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 COG1Q8WTW3 980 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 PACSIN1Q9BY11 444 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 PARVGQ9HBI0 331 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 KCNH7Q9NS40 1196 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 CEP72Q9P209 647 aa12.02□□□□□ -0.49
DDX56-203ENST00000421223 SIPA1L1O43166 1804 aa12.01□□□□□ -0.49
DDX56-203ENST00000421223 TMCO5BA8MYB1 307 aa12.01□□□□□ -0.49
DDX56-203ENST00000421223 PIK3CDO00329 1044 aa12.01□□□□□ -0.49
DDX56-203ENST00000421223 PDE2AO00408 941 aaPredicted RBP12.01□□□□□ -0.49
DDX56-203ENST00000421223 ZRANB2O95218 330 aaKnown RBP eCLIP12.01□□□□□ -0.49
DDX56-203ENST00000421223 FTCDO95954 541 aa12.01□□□□□ -0.49
DDX56-203ENST00000421223 AFPP02771 609 aaKnown RBP12.01□□□□□ -0.49
DDX56-203ENST00000421223 RPL13P26373 211 aaKnown RBP12.01□□□□□ -0.49
DDX56-203ENST00000421223 NOP2P46087 812 aaKnown RBP12.01□□□□□ -0.49
DDX56-203ENST00000421223 KCTD19Q17RG1 926 aaPredicted RBP12.01□□□□□ -0.49
DDX56-203ENST00000421223 KIAA0753Q2KHM9 967 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms