RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 PPP2R3CQ969Q6 453 aa19.28■□□□□ 0.68
UPF3AP3-201ENST00000420996 SDF4Q9BRK5 362 aa19.28■□□□□ 0.68
UPF3AP3-201ENST00000420996 CELF4Q9BZC1 486 aaKnown RBP19.28■□□□□ 0.68
UPF3AP3-201ENST00000420996 LSG1Q9H089 658 aaKnown RBP19.28■□□□□ 0.68
UPF3AP3-201ENST00000420996 KCNH6Q9H252 994 aa19.28■□□□□ 0.68
UPF3AP3-201ENST00000420996 CD207Q9UJ71 328 aa19.28■□□□□ 0.68
UPF3AP3-201ENST00000420996 LINC01565O15544 149 aa19.27■□□□□ 0.68
UPF3AP3-201ENST00000420996 ITGB1P05556 798 aa19.27■□□□□ 0.68
UPF3AP3-201ENST00000420996 STAT5BP51692 787 aa19.27■□□□□ 0.68
UPF3AP3-201ENST00000420996 ACTR2P61160 394 aa19.27■□□□□ 0.68
UPF3AP3-201ENST00000420996 TMEM62Q0P6H9 643 aa19.27■□□□□ 0.68
UPF3AP3-201ENST00000420996 SGMS1Q86VZ5 419 aa19.27■□□□□ 0.68
UPF3AP3-201ENST00000420996 RAB11FIP4Q86YS3 637 aa19.27■□□□□ 0.68
UPF3AP3-201ENST00000420996 NME8Q8N427 588 aa19.27■□□□□ 0.68
UPF3AP3-201ENST00000420996 CYP2W1Q8TAV3 490 aa19.27■□□□□ 0.68
UPF3AP3-201ENST00000420996 TRAPPC12Q8WVT3 735 aa19.27■□□□□ 0.68
UPF3AP3-201ENST00000420996 KDM3AQ9Y4C1 1321 aa19.26■□□□□ 0.67
UPF3AP3-201ENST00000420996 SMIM35A0A1B0GVV1 85 aa19.26■□□□□ 0.67
UPF3AP3-201ENST00000420996 CSPG5O95196 566 aa19.26■□□□□ 0.67
UPF3AP3-201ENST00000420996 SCG2P13521 617 aa19.26■□□□□ 0.67
UPF3AP3-201ENST00000420996 DNAJB1P25685 340 aa19.26■□□□□ 0.67
UPF3AP3-201ENST00000420996 PAK2Q13177 524 aa19.26■□□□□ 0.67
UPF3AP3-201ENST00000420996 NECTIN1Q15223 517 aa19.26■□□□□ 0.67
UPF3AP3-201ENST00000420996 HERC4Q5GLZ8 1057 aaPredicted RBP19.26■□□□□ 0.67
UPF3AP3-201ENST00000420996 FAM43BQ6ZT52 329 aaPredicted RBP19.26■□□□□ 0.67
UPF3AP3-201ENST00000420996 ALYREFQ86V81 257 aaKnown RBP19.26■□□□□ 0.67
UPF3AP3-201ENST00000420996 KLHL23Q8NBE8 558 aa19.26■□□□□ 0.67
UPF3AP3-201ENST00000420996 MSLNLQ96KJ4 702 aa19.26■□□□□ 0.67
UPF3AP3-201ENST00000420996 LRRC2Q9BYS8 371 aa19.26■□□□□ 0.67
UPF3AP3-201ENST00000420996 STXBP3O00186 592 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 ATG7O95352 703 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 EYA4O95677 639 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 FOSP01100 380 aaPredicted RBP19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 ARP10275 920 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 NDUFV1P49821 464 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 SLC26A2P50443 739 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 KRT76Q01546 638 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 PAN2Q504Q3 1202 aaKnown RBP19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 CEP55Q53EZ4 464 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 CREB3L3Q68CJ9 461 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 WWC2Q6AWC2 1192 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 MTHFD1LQ6UB35 978 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 SYNE3Q6ZMZ3 975 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 MICU3Q86XE3 530 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 RNF135Q8IUD6 432 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 RIC8AQ9NPQ8 531 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 LRFN2Q9ULH4 789 aa19.25■□□□□ 0.67
UPF3AP3-201ENST00000420996 ITGB3BPQ13352 177 aaPredicted RBP19.24■□□□□ 0.67
UPF3AP3-201ENST00000420996 HFE2Q6ZVN8 426 aa19.24■□□□□ 0.67
UPF3AP3-201ENST00000420996 EFHBQ8N7U6 833 aa19.24■□□□□ 0.67
UPF3AP3-201ENST00000420996 POF1BQ8WVV4 589 aa19.24■□□□□ 0.67
UPF3AP3-201ENST00000420996 ESYT1Q9BSJ8 1104 aa19.24■□□□□ 0.67
UPF3AP3-201ENST00000420996 TMX1Q9H3N1 280 aa19.24■□□□□ 0.67
UPF3AP3-201ENST00000420996 AGO4Q9HCK5 861 aaKnown RBP19.24■□□□□ 0.67
UPF3AP3-201ENST00000420996 MUTYHQ9UIF7 546 aa19.24■□□□□ 0.67
UPF3AP3-201ENST00000420996 PLXNA4Q9HCM2 1894 aa19.24■□□□□ 0.67
UPF3AP3-201ENST00000420996 CNTNAP5Q8WYK1 1306 aa19.24■□□□□ 0.67
UPF3AP3-201ENST00000420996 C5orf42Q9H799 3197 aa19.23■□□□□ 0.67
UPF3AP3-201ENST00000420996 IGKV6D-21A0A0A0MT36 114 aa19.23■□□□□ 0.67
UPF3AP3-201ENST00000420996 MEIS1O00470 390 aa19.23■□□□□ 0.67
UPF3AP3-201ENST00000420996 KLRC1P26715 233 aa19.23■□□□□ 0.67
UPF3AP3-201ENST00000420996 NAPAP54920 295 aa19.23■□□□□ 0.67
UPF3AP3-201ENST00000420996 NFX1Q12986 1120 aaKnown RBP19.23■□□□□ 0.67
UPF3AP3-201ENST00000420996 TYW1BQ6NUM6 668 aa19.23■□□□□ 0.67
UPF3AP3-201ENST00000420996 PPP1R18Q6NYC8 613 aa19.23■□□□□ 0.67
UPF3AP3-201ENST00000420996 ADGRD2Q7Z7M1 963 aa19.23■□□□□ 0.67
UPF3AP3-201ENST00000420996 FBXL18Q96ME1 805 aa19.23■□□□□ 0.67
UPF3AP3-201ENST00000420996 ANO3Q9BYT9 981 aa19.23■□□□□ 0.67
UPF3AP3-201ENST00000420996 RBM28Q9NW13 759 aaKnown RBP19.23■□□□□ 0.67
UPF3AP3-201ENST00000420996 RNF216Q9NWF9 866 aaPredicted RBP19.23■□□□□ 0.67
UPF3AP3-201ENST00000420996 CLEC1BQ9P126 229 aa19.23■□□□□ 0.67
UPF3AP3-201ENST00000420996 FNDC1Q4ZHG4 1894 aaPredicted RBP19.22■□□□□ 0.67
UPF3AP3-201ENST00000420996 EVPLQ92817 2033 aa19.22■□□□□ 0.67
UPF3AP3-201ENST00000420996 HBP1O60381 514 aa19.22■□□□□ 0.67
UPF3AP3-201ENST00000420996 SARSP49591 514 aaKnown RBP19.22■□□□□ 0.67
UPF3AP3-201ENST00000420996 ADCY7P51828 1080 aa19.22■□□□□ 0.67
UPF3AP3-201ENST00000420996 COASYQ13057 564 aa19.22■□□□□ 0.67
UPF3AP3-201ENST00000420996 TMEM266Q2M3C6 531 aa19.22■□□□□ 0.67
UPF3AP3-201ENST00000420996 APOA5Q6Q788 366 aa19.22■□□□□ 0.67
UPF3AP3-201ENST00000420996 NIPA1Q7RTP0 329 aa19.22■□□□□ 0.67
UPF3AP3-201ENST00000420996 SMRP1Q8NCR6 262 aa19.22■□□□□ 0.67
UPF3AP3-201ENST00000420996 PGBD1Q96JS3 809 aa19.22■□□□□ 0.67
UPF3AP3-201ENST00000420996 MFSD14AQ96MC6 490 aa19.22■□□□□ 0.67
UPF3AP3-201ENST00000420996 PCDHB7Q9Y5E2 793 aa19.22■□□□□ 0.67
UPF3AP3-201ENST00000420996 hCG_1984214I3L0E3 225 aa19.21■□□□□ 0.67
UPF3AP3-201ENST00000420996 SREBF1P36956 1147 aa19.21■□□□□ 0.67
UPF3AP3-201ENST00000420996 NRIP1P48552 1158 aa19.21■□□□□ 0.67
UPF3AP3-201ENST00000420996 GATMP50440 423 aa19.21■□□□□ 0.67
UPF3AP3-201ENST00000420996 NHLH1Q02575 133 aa19.21■□□□□ 0.67
UPF3AP3-201ENST00000420996 FUT2Q10981 343 aa19.21■□□□□ 0.67
UPF3AP3-201ENST00000420996 ODR4Q5SWX8 454 aa19.21■□□□□ 0.67
UPF3AP3-201ENST00000420996 FAM160B1Q5W0V3 765 aa19.21■□□□□ 0.67
UPF3AP3-201ENST00000420996 ABHD15Q6UXT9 468 aa19.21■□□□□ 0.67
UPF3AP3-201ENST00000420996 KIAA0319LQ8IZA0 1049 aa19.21■□□□□ 0.67
UPF3AP3-201ENST00000420996 ZNF713Q8N859 430 aaPredicted RBP19.21■□□□□ 0.67
UPF3AP3-201ENST00000420996 EDAQ92838 391 aa19.21■□□□□ 0.67
UPF3AP3-201ENST00000420996 GLT8D2Q9H1C3 349 aa19.21■□□□□ 0.67
UPF3AP3-201ENST00000420996 ERVK-5Q9HDB9 667 aa19.21■□□□□ 0.67
UPF3AP3-201ENST00000420996 PCDHB12Q9Y5F1 795 aa19.21■□□□□ 0.67
UPF3AP3-201ENST00000420996 V9GY48 417 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms