RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.18□□□□□ -1.1
BDNF-209ENST00000420794 LRRIQ4A6NIV6 560 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 EXOC3O60645 756 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 MED24O75448 989 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 ITGB5P18084 799 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 MARK3P27448 753 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 IGBP1P78318 339 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 FKBP3Q00688 224 aaKnown RBP8.18□□□□□ -1.1
BDNF-209ENST00000420794 COASYQ13057 564 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 SYCP1Q15431 976 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 GPR142Q7Z601 462 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 SYT2Q8N9I0 419 aaPredicted RBP8.18□□□□□ -1.1
BDNF-209ENST00000420794 ETNPPLQ8TBG4 499 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 TCP11Q8WWU5 503 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 SHISA4Q96DD7 197 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 SENP7Q9BQF6 1050 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 BPIFA3Q9BQP9 254 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 DEF6Q9H4E7 631 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 LUC7LQ9NQ29 371 aaKnown RBP8.18□□□□□ -1.1
BDNF-209ENST00000420794 ODF2LQ9ULJ1 636 aa8.18□□□□□ -1.1
BDNF-209ENST00000420794 DDX60LQ5H9U9 1706 aaKnown RBP8.17□□□□□ -1.1
BDNF-209ENST00000420794 PSMD10O75832 226 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 DGAT1O75907 488 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 LRRC63Q05C16 580 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 FSTL1Q12841 308 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 METTL7BQ6UX53 244 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 ARMCX2Q7L311 632 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 RAET1EQ8TD07 263 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 ABHD16BQ9H3Z7 469 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 ZCCHC17Q9NP64 241 aaKnown RBP8.17□□□□□ -1.1
BDNF-209ENST00000420794 GDAQ9Y2T3 454 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 MYMKA6NI61 221 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 M0QZ92 97 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 RHOBTB3O94955 611 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 LRRC41Q15345 812 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 PPP4R3CPQ6ZMV5 832 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 RBM43Q6ZSC3 357 aaKnown RBP8.17□□□□□ -1.1
BDNF-209ENST00000420794 FAM43AQ8N2R8 423 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 OR6J1Q8NGC5 347 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 IL31RAQ8NI17 732 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 CPLX3Q8WVH0 158 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 INPP4AQ96PE3 977 aaPredicted RBP8.17□□□□□ -1.1
BDNF-209ENST00000420794 ACCSQ96QU6 501 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 VPS16Q9H269 839 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 GINS2Q9Y248 185 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 ADAM9Q13443 819 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 FAM47CQ5HY64 1035 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 SAPCD2Q86UD0 394 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 FBXO16Q8IX29 292 aaPredicted RBP8.17□□□□□ -1.1
BDNF-209ENST00000420794 ABRAQ8N0Z2 381 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 PLCD3Q8N3E9 789 aa8.17□□□□□ -1.1
BDNF-209ENST00000420794 GUF1Q8N442 669 aaKnown RBP8.17□□□□□ -1.1
BDNF-209ENST00000420794 METTL14Q9HCE5 456 aaKnown RBP8.17□□□□□ -1.1
BDNF-209ENST00000420794 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.17□□□□□ -1.1
BDNF-209ENST00000420794 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.17□□□□□ -1.1
BDNF-209ENST00000420794 KCNJ18B7U540 433 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 NKRFO15226 690 aaKnown RBP eCLIP8.16□□□□□ -1.1
BDNF-209ENST00000420794 ZNF75DP51815 510 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 FAM193AP78312 1265 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 KCNJ12Q14500 433 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 NAALADL2Q58DX5 795 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 CYP4F22Q6NT55 531 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 SFR1Q86XK3 245 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 C4orf19Q8IY42 314 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 PURBQ96QR8 312 aaKnown RBP8.16□□□□□ -1.1
BDNF-209ENST00000420794 COL20A1Q9P218 1284 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 FAM184BQ9ULE4 1060 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 ADAMTS5Q9UNA0 930 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 ARFGEF1Q9Y6D6 1849 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 SFI1A8K8P3 1242 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 DYNC1LI2O43237 492 aaPredicted RBP8.16□□□□□ -1.1
BDNF-209ENST00000420794 SUPT20HL2P0C7V6 817 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 EEF1GP26641 437 aaKnown RBP8.16□□□□□ -1.1
BDNF-209ENST00000420794 PRCPP42785 496 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 LIG4P49917 911 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 PEX3P56589 373 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 PRKCEQ02156 737 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 TNFAIP2Q03169 654 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 IL17AQ16552 155 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 DCAF17Q5H9S7 520 aaPredicted RBP8.16□□□□□ -1.1
BDNF-209ENST00000420794 RASAL3Q86YV0 1011 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 TXLNBQ8N3L3 684 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 CAPNS2Q96L46 248 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 MBOAT7Q96N66 472 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 MTRQ99707 1265 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 GBP3Q9H0R5 595 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 MMRN2Q9H8L6 949 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 ADAMTS3O15072 1205 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 PSMC4P43686 418 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 FNBP1Q96RU3 617 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 PORCNQ9H237 461 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 ARMCX3Q9UH62 379 aaPredicted RBP8.16□□□□□ -1.1
BDNF-209ENST00000420794 TLL2Q9Y6L7 1015 aa8.16□□□□□ -1.1
BDNF-209ENST00000420794 NFASCO94856 1347 aa8.15□□□□□ -1.1
BDNF-209ENST00000420794 SPATA31C2B4DYI2 1134 aa8.15□□□□□ -1.1
BDNF-209ENST00000420794 SLITRK3O94933 977 aa8.15□□□□□ -1.1
BDNF-209ENST00000420794 GNAT1P11488 350 aa8.15□□□□□ -1.1
BDNF-209ENST00000420794 TCF7P36402 384 aaPredicted RBP8.15□□□□□ -1.1
BDNF-209ENST00000420794 SLC26A2P50443 739 aa8.15□□□□□ -1.1
BDNF-209ENST00000420794 MRPS9P82933 396 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms