RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 RNF10Q8N5U6 811 aaKnown RBP12.7□□□□□ -0.38
DDR1-232ENST00000418800 ETAA1Q9NY74 926 aa12.7□□□□□ -0.38
DDR1-232ENST00000418800 PIK3C2AO00443 1686 aa12.7□□□□□ -0.38
DDR1-232ENST00000418800 FGFR4P22455 802 aa12.7□□□□□ -0.38
DDR1-232ENST00000418800 KLRK1P26718 216 aa12.7□□□□□ -0.38
DDR1-232ENST00000418800 SLC16A2P36021 539 aa12.7□□□□□ -0.38
DDR1-232ENST00000418800 RNASELQ05823 741 aaKnown RBP12.7□□□□□ -0.38
DDR1-232ENST00000418800 PHLDB2Q86SQ0 1253 aa12.7□□□□□ -0.38
DDR1-232ENST00000418800 CLEC10AQ8IUN9 316 aa12.7□□□□□ -0.38
DDR1-232ENST00000418800 USP38Q8NB14 1042 aa12.7□□□□□ -0.38
DDR1-232ENST00000418800 NUDT12Q9BQG2 462 aa12.7□□□□□ -0.38
DDR1-232ENST00000418800 NUCKS1Q9H1E3 243 aaKnown RBP12.7□□□□□ -0.38
DDR1-232ENST00000418800 TCP11X1B4DZS4 312 aa12.7□□□□□ -0.38
DDR1-232ENST00000418800 PABPC4Q13310 644 aaKnown RBP eCLIP12.7□□□□□ -0.383e-6■□□□□ 9
DDR1-232ENST00000418800 BIRC3Q13489 604 aa12.7□□□□□ -0.38
DDR1-232ENST00000418800 PAPOLBQ9NRJ5 636 aaKnown RBP12.7□□□□□ -0.38
DDR1-232ENST00000418800 AMFRQ9UKV5 643 aa12.7□□□□□ -0.38
DDR1-232ENST00000418800 A0A1W2PRG0 241 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 PTK2Q05397 1052 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 EAPPQ56P03 285 aaPredicted RBP12.69□□□□□ -0.38
DDR1-232ENST00000418800 RCSD1Q6JBY9 416 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 RFX8Q6ZV50 586 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 ERGIC2Q96RQ1 377 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 KBTBD4Q9NVX7 518 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 CTTNBP2NLQ9P2B4 639 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 ATP6V0A2Q9Y487 856 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 DAAM1Q9Y4D1 1078 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 IFI35P80217 286 aaPredicted RBP12.69□□□□□ -0.38
DDR1-232ENST00000418800 KRT25Q7Z3Z0 450 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 METTL13Q8N6R0 699 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 ANKS1AQ92625 1134 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 TATDN2Q93075 761 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 BATF3Q9NR55 127 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 DLGAP2Q9P1A6 1054 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 FLOT1O75955 427 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 CNGA1P29973 690 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 HIBADHP31937 336 aaKnown RBP12.69□□□□□ -0.38
DDR1-232ENST00000418800 ZNF76P36508 570 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 ZNF131P52739 623 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 KCNH2Q12809 1159 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 EXOC3L4Q17RC7 722 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 GRIPAP1Q4V328 841 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 ANKRD20A2Q5SQ80 823 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 ANKRD20A1Q5TYW2 823 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 RASIP1Q5U651 963 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 ANKRD20A3Q5VUR7 823 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 NEUROG2Q9H2A3 272 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
DDR1-232ENST00000418800 ARMCX3Q9UH62 379 aaPredicted RBP12.69□□□□□ -0.38
DDR1-232ENST00000418800 SERPINA10Q9UK55 444 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 PCDHA12Q9UN75 941 aa12.69□□□□□ -0.38
DDR1-232ENST00000418800 FOXO6A8MYZ6 492 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 CHMP2AO43633 222 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 SUN1O94901 812 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 NPY5RQ15761 445 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 CCDC65Q8IXS2 484 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 TEKT4Q8WW24 435 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 PNMA3Q9UL41 463 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 WDR17Q8IZU2 1322 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 GBP1P32455 592 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 STX2P32856 288 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 SLC8A3P57103 927 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 FUT2Q10981 343 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 RGPD2P0DJD1 1756 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 GRID2IPA4D2P6 1211 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 GLYCTKQ8IVS8 523 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 C3orf20Q8ND61 904 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 LRRC15Q8TF66 581 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 TRIM7Q9C029 511 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 ZMYND12Q9H0C1 365 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 KLHL14Q9P2G3 628 aa12.68□□□□□ -0.38
DDR1-232ENST00000418800 RGPD1P0DJD0 1748 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 MYH6P13533 1939 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 XIRP1Q702N8 1843 aaKnown RBP12.67□□□□□ -0.38
DDR1-232ENST00000418800 GCNT3O95395 438 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 NQO1P15559 274 aaKnown RBP12.67□□□□□ -0.38
DDR1-232ENST00000418800 MSH2P43246 934 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 KCNJ1P48048 391 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 USP4Q13107 963 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 MESDQ14696 234 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 SLC18A3Q16572 532 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 HP1BP3Q5SSJ5 553 aaPredicted RBP12.67□□□□□ -0.38
DDR1-232ENST00000418800 TMEM154Q6P9G4 183 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 ARMC9Q7Z3E5 817 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 TAB3Q8N5C8 712 aaPredicted RBP12.67□□□□□ -0.38
DDR1-232ENST00000418800 VGLL2Q8N8G2 317 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 CEP120Q8N960 986 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 GDF3Q9NR23 364 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 ANKRD62A6NC57 917 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 XRCC5P13010 732 aaKnown RBP12.67□□□□□ -0.38
DDR1-232ENST00000418800 TNFAIP3P21580 790 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 STAT3P40763 770 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 DR1Q01658 176 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 ZNF746Q6NUN9 644 aaPredicted RBP12.67□□□□□ -0.38
DDR1-232ENST00000418800 NEK9Q8TD19 979 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 CCT6BQ92526 530 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 EYA3Q99504 573 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 TMEM47Q9BQJ4 181 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 CCSER1Q9C0I3 900 aa12.67□□□□□ -0.38
DDR1-232ENST00000418800 EMILIN3Q9NT22 766 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms