RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 IGLV3-22A0A075B6J6 115 aa24.79■■□□□ 1.56
ACTB-203ENST00000417101 IGKV6D-21A0A0A0MT36 114 aa24.79■■□□□ 1.56
ACTB-203ENST00000417101 ESYT2A0FGR8 921 aa24.79■■□□□ 1.56
ACTB-203ENST00000417101 FAM160B1Q5W0V3 765 aa24.79■■□□□ 1.56
ACTB-203ENST00000417101 MTHFD1LQ6UB35 978 aa24.79■■□□□ 1.56
ACTB-203ENST00000417101 CRYGNQ8WXF5 182 aa24.79■■□□□ 1.56
ACTB-203ENST00000417101 LINC01599Q8WXQ3 324 aa24.79■■□□□ 1.56
ACTB-203ENST00000417101 ZMYND12Q9H0C1 365 aa24.79■■□□□ 1.56
ACTB-203ENST00000417101 RC3H2Q9HBD1 1191 aaKnown RBP24.79■■□□□ 1.56
ACTB-203ENST00000417101 C6orf50Q9HD87 102 aa24.79■■□□□ 1.56
ACTB-203ENST00000417101 SQORQ9Y6N5 450 aa24.79■■□□□ 1.56
ACTB-203ENST00000417101 SMIM35A0A1B0GVV1 85 aa24.78■■□□□ 1.56
ACTB-203ENST00000417101 IPO5O00410 1097 aaKnown RBP24.78■■□□□ 1.56
ACTB-203ENST00000417101 DHX15O43143 795 aaKnown RBP24.78■■□□□ 1.56
ACTB-203ENST00000417101 CYP3A4P08684 503 aa24.78■■□□□ 1.56
ACTB-203ENST00000417101 RPS6KB1P23443 525 aa24.78■■□□□ 1.56
ACTB-203ENST00000417101 PKN1Q16512 942 aa24.78■■□□□ 1.56
ACTB-203ENST00000417101 LEXMQ3ZCV2 418 aa24.78■■□□□ 1.56
ACTB-203ENST00000417101 RTN4RL1Q86UN2 441 aaPredicted RBP24.78■■□□□ 1.56
ACTB-203ENST00000417101 CCDC60Q8IWA6 550 aaPredicted RBP24.78■■□□□ 1.56
ACTB-203ENST00000417101 REXO1Q8N1G1 1221 aaKnown RBP24.78■■□□□ 1.56
ACTB-203ENST00000417101 ATP8B4Q8TF62 1192 aa24.78■■□□□ 1.56
ACTB-203ENST00000417101 CCDC12Q8WUD4 166 aaPredicted RBP24.78■■□□□ 1.56
ACTB-203ENST00000417101 PHKBQ93100 1093 aa24.78■■□□□ 1.56
ACTB-203ENST00000417101 CCDC136Q96JN2 1154 aa24.78■■□□□ 1.56
ACTB-203ENST00000417101 CELF4Q9BZC1 486 aaKnown RBP24.78■■□□□ 1.56
ACTB-203ENST00000417101 PADI3Q9ULW8 664 aa24.78■■□□□ 1.56
ACTB-203ENST00000417101 PRPF3O43395 683 aaKnown RBP24.77■■□□□ 1.56
ACTB-203ENST00000417101 HBP1O60381 514 aa24.77■■□□□ 1.56
ACTB-203ENST00000417101 PPFIA3O75145 1194 aa24.77■■□□□ 1.56
ACTB-203ENST00000417101 LINC00271P0C7V0 271 aa24.77■■□□□ 1.56
ACTB-203ENST00000417101 KLRC1P26715 233 aa24.77■■□□□ 1.56
ACTB-203ENST00000417101 BMPR1AP36894 532 aa24.77■■□□□ 1.56
ACTB-203ENST00000417101 PAK2Q13177 524 aa24.77■■□□□ 1.56
ACTB-203ENST00000417101 BTG3Q14201 252 aaPredicted RBP24.77■■□□□ 1.56
ACTB-203ENST00000417101 TCEAL5Q5H9L2 206 aa24.77■■□□□ 1.56
ACTB-203ENST00000417101 MCTP2Q6DN12 878 aa24.77■■□□□ 1.56
ACTB-203ENST00000417101 PDXDC2PQ6P474 469 aa24.77■■□□□ 1.56
ACTB-203ENST00000417101 ZNF689Q96CS4 500 aaPredicted RBP24.77■■□□□ 1.56
ACTB-203ENST00000417101 FTHL17Q9BXU8 183 aa24.77■■□□□ 1.56
ACTB-203ENST00000417101 ZNF302Q9NR11 478 aa24.77■■□□□ 1.56
ACTB-203ENST00000417101 IGSF9BQ9UPX0 1349 aa24.77■■□□□ 1.56
ACTB-203ENST00000417101 NID2Q14112 1375 aa24.77■■□□□ 1.56
ACTB-203ENST00000417101 TTC3P53804 2025 aa24.76■■□□□ 1.55
ACTB-203ENST00000417101 C5orf67F2Z3F1 127 aa24.76■■□□□ 1.55
ACTB-203ENST00000417101 DGKIO75912 1065 aa24.76■■□□□ 1.55
ACTB-203ENST00000417101 RB1P06400 928 aa24.76■■□□□ 1.55
ACTB-203ENST00000417101 KRT76Q01546 638 aa24.76■■□□□ 1.55
ACTB-203ENST00000417101 AKAP17AQ02040 695 aaKnown RBP24.76■■□□□ 1.55
ACTB-203ENST00000417101 SWSAP1Q6NVH7 229 aa24.76■■□□□ 1.55
ACTB-203ENST00000417101 MIS18BP1Q6P0N0 1132 aa24.76■■□□□ 1.55
ACTB-203ENST00000417101 NME8Q8N427 588 aa24.76■■□□□ 1.55
ACTB-203ENST00000417101 FBXL16Q8N461 479 aa24.76■■□□□ 1.55
ACTB-203ENST00000417101 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.76■■□□□ 1.55
ACTB-203ENST00000417101 CLP1Q92989 425 aaKnown RBP24.76■■□□□ 1.55
ACTB-203ENST00000417101 ZNF577Q9BSK1 485 aa24.76■■□□□ 1.55
ACTB-203ENST00000417101 C11orf84Q9BUA3 381 aaPredicted RBP24.76■■□□□ 1.55
ACTB-203ENST00000417101 NSUN3Q9H649 340 aaKnown RBP24.76■■□□□ 1.55
ACTB-203ENST00000417101 RWDD3Q9Y3V2 267 aa24.76■■□□□ 1.55
ACTB-203ENST00000417101 MYO7AQ13402 2215 aa24.76■■□□□ 1.55
ACTB-203ENST00000417101 NLRC5Q86WI3 1866 aa24.75■■□□□ 1.55
ACTB-203ENST00000417101 GNA11P29992 359 aa24.75■■□□□ 1.55
ACTB-203ENST00000417101 RASGRP4Q8TDF6 673 aa24.75■■□□□ 1.55
ACTB-203ENST00000417101 C1QTNF1Q9BXJ1 281 aa24.75■■□□□ 1.55
ACTB-203ENST00000417101 AGXT2Q9BYV1 514 aa24.75■■□□□ 1.55
ACTB-203ENST00000417101 RAPGEFL1Q9UHV5 662 aa24.75■■□□□ 1.55
ACTB-203ENST00000417101 GINS2Q9Y248 185 aa24.75■■□□□ 1.55
ACTB-203ENST00000417101 KDM3AQ9Y4C1 1321 aa24.75■■□□□ 1.55
ACTB-203ENST00000417101 GRM6O15303 877 aa24.74■■□□□ 1.55
ACTB-203ENST00000417101 REC8O95072 547 aa24.74■■□□□ 1.55
ACTB-203ENST00000417101 PSMA5P28066 241 aa24.74■■□□□ 1.55
ACTB-203ENST00000417101 SETQ01105 290 aaPredicted RBP24.74■■□□□ 1.55
ACTB-203ENST00000417101 NTRK3Q16288 839 aa24.74■■□□□ 1.55
ACTB-203ENST00000417101 TMEM266Q2M3C6 531 aa24.74■■□□□ 1.55
ACTB-203ENST00000417101 EP400NLQ6ZTU2 488 aa24.74■■□□□ 1.55
ACTB-203ENST00000417101 NPAS4Q8IUM7 802 aa24.74■■□□□ 1.55
ACTB-203ENST00000417101 CKAP2LQ8IYA6 745 aa24.74■■□□□ 1.55
ACTB-203ENST00000417101 EPHX3Q9H6B9 360 aa24.74■■□□□ 1.55
ACTB-203ENST00000417101 TBC1D22BQ9NU19 505 aa24.74■■□□□ 1.55
ACTB-203ENST00000417101 RALGAPA2Q2PPJ7 1873 aa24.74■■□□□ 1.55
ACTB-203ENST00000417101 COL1A2P08123 1366 aa24.73■■□□□ 1.55
ACTB-203ENST00000417101 H3BQ06 376 aaPredicted RBP24.73■■□□□ 1.55
ACTB-203ENST00000417101 ATP4AP20648 1035 aa24.73■■□□□ 1.55
ACTB-203ENST00000417101 PRR16Q569H4 304 aa24.73■■□□□ 1.55
ACTB-203ENST00000417101 ZNF484Q5JVG2 852 aa24.73■■□□□ 1.55
ACTB-203ENST00000417101 PTCRAQ6ISU1 281 aaPredicted RBP24.73■■□□□ 1.55
ACTB-203ENST00000417101 KIAA0319LQ8IZA0 1049 aa24.73■■□□□ 1.55
ACTB-203ENST00000417101 CRIPAKQ8N1N5 446 aa24.73■■□□□ 1.55
ACTB-203ENST00000417101 PABPC5Q96DU9 382 aaKnown RBP24.73■■□□□ 1.55
ACTB-203ENST00000417101 SLC26A6Q9BXS9 759 aa24.73■■□□□ 1.55
ACTB-203ENST00000417101 NCOA5Q9HCD5 579 aaKnown RBP24.73■■□□□ 1.55
ACTB-203ENST00000417101 CD320Q9NPF0 282 aa24.73■■□□□ 1.55
ACTB-203ENST00000417101 CCT2P78371 535 aaKnown RBP24.72■■□□□ 1.55
ACTB-203ENST00000417101 NFX1Q12986 1120 aaKnown RBP24.72■■□□□ 1.55
ACTB-203ENST00000417101 ZNF746Q6NUN9 644 aaPredicted RBP24.72■■□□□ 1.55
ACTB-203ENST00000417101 TRMT1LQ7Z2T5 733 aaKnown RBP24.72■■□□□ 1.55
ACTB-203ENST00000417101 BICD2Q8TD16 824 aa24.72■■□□□ 1.55
ACTB-203ENST00000417101 NEK9Q8TD19 979 aa24.72■■□□□ 1.55
ACTB-203ENST00000417101 KHSRPQ92945 711 aaKnown RBP eCLIP24.72■■□□□ 1.55
ACTB-203ENST00000417101 RNF26Q9BY78 433 aaPredicted RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms