RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 PUS10Q3MIT2 529 aaKnown RBP16.91■□□□□ 0.3
RPS28-201ENST00000417088 CRIPAKQ8N1N5 446 aa16.91■□□□□ 0.3
RPS28-201ENST00000417088 ZNF713Q8N859 430 aaPredicted RBP16.91■□□□□ 0.3
RPS28-201ENST00000417088 LMAN2LQ9H0V9 348 aa16.91■□□□□ 0.3
RPS28-201ENST00000417088 IGKV6D-21A0A0A0MT36 114 aa16.9■□□□□ 0.3
RPS28-201ENST00000417088 POTEB3A0JP26 581 aa16.9■□□□□ 0.3
RPS28-201ENST00000417088 FAM86C2PA6NEL3 165 aa16.9■□□□□ 0.3
RPS28-201ENST00000417088 GOLGA8AA7E2F4 631 aa16.9■□□□□ 0.3
RPS28-201ENST00000417088 GOLGA8BA8MQT2 603 aa16.9■□□□□ 0.3
RPS28-201ENST00000417088 AP3B2Q13367 1082 aa16.9■□□□□ 0.3
RPS28-201ENST00000417088 POTEBQ6S5H4 581 aa16.9■□□□□ 0.3
RPS28-201ENST00000417088 EP400NLQ6ZTU2 488 aa16.9■□□□□ 0.3
RPS28-201ENST00000417088 FTHL17Q9BXU8 183 aa16.9■□□□□ 0.3
RPS28-201ENST00000417088 CELF4Q9BZC1 486 aaKnown RBP16.9■□□□□ 0.3
RPS28-201ENST00000417088 PADI3Q9ULW8 664 aa16.9■□□□□ 0.3
RPS28-201ENST00000417088 KLF18A0A0U1RQI7 1052 aa16.89■□□□□ 0.29
RPS28-201ENST00000417088 SMIM35A0A1B0GVV1 85 aa16.89■□□□□ 0.29
RPS28-201ENST00000417088 M0QZ92 97 aa16.89■□□□□ 0.29
RPS28-201ENST00000417088 CCNE2O96020 404 aa16.89■□□□□ 0.29
RPS28-201ENST00000417088 SSTR3P32745 418 aaPredicted RBP16.89■□□□□ 0.29
RPS28-201ENST00000417088 LTBRP36941 435 aa16.89■□□□□ 0.29
RPS28-201ENST00000417088 MTHFD1LQ6UB35 978 aa16.89■□□□□ 0.29
RPS28-201ENST00000417088 ABHD15Q6UXT9 468 aa16.89■□□□□ 0.29
RPS28-201ENST00000417088 NIPA1Q7RTP0 329 aa16.89■□□□□ 0.29
RPS28-201ENST00000417088 NPAS4Q8IUM7 802 aa16.89■□□□□ 0.29
RPS28-201ENST00000417088 FAM122AQ96E09 287 aa16.89■□□□□ 0.29
RPS28-201ENST00000417088 GLT8D2Q9H1C3 349 aa16.89■□□□□ 0.29
RPS28-201ENST00000417088 CLDND1Q9NY35 253 aa16.89■□□□□ 0.29
RPS28-201ENST00000417088 MRPL42Q9Y6G3 142 aaKnown RBP16.89■□□□□ 0.29
RPS28-201ENST00000417088 IGSF9BQ9UPX0 1349 aa16.89■□□□□ 0.29
RPS28-201ENST00000417088 KDM3AQ9Y4C1 1321 aa16.89■□□□□ 0.29
RPS28-201ENST00000417088 DDX39AO00148 427 aaKnown RBP16.88■□□□□ 0.29
RPS28-201ENST00000417088 NCK2O43639 380 aa16.88■□□□□ 0.29
RPS28-201ENST00000417088 KLRC1P26715 233 aa16.88■□□□□ 0.29
RPS28-201ENST00000417088 ZNF76P36508 570 aa16.88■□□□□ 0.29
RPS28-201ENST00000417088 SLC26A2P50443 739 aa16.88■□□□□ 0.29
RPS28-201ENST00000417088 RCAN1P53805 252 aa16.88■□□□□ 0.29
RPS28-201ENST00000417088 KRT76Q01546 638 aa16.88■□□□□ 0.29
RPS28-201ENST00000417088 HYAL1Q12794 435 aa16.88■□□□□ 0.29
RPS28-201ENST00000417088 KRT32Q14532 448 aa16.88■□□□□ 0.29
RPS28-201ENST00000417088 CTC1Q2NKJ3 1217 aa16.88■□□□□ 0.29
RPS28-201ENST00000417088 CMTR2Q8IYT2 770 aaKnown RBP16.88■□□□□ 0.29
RPS28-201ENST00000417088 NME8Q8N427 588 aa16.88■□□□□ 0.29
RPS28-201ENST00000417088 PLVAPQ9BX97 442 aa16.88■□□□□ 0.29
RPS28-201ENST00000417088 ALG13Q9NP73 1137 aaKnown RBP16.88■□□□□ 0.29
RPS28-201ENST00000417088 FAM86B1E9PN63 330 aa16.87■□□□□ 0.29
RPS28-201ENST00000417088 ADAMTS3O15072 1205 aa16.87■□□□□ 0.29
RPS28-201ENST00000417088 DHX15O43143 795 aaKnown RBP16.87■□□□□ 0.29
RPS28-201ENST00000417088 HBP1O60381 514 aa16.87■□□□□ 0.29
RPS28-201ENST00000417088 MMP1P03956 469 aa16.87■□□□□ 0.29
RPS28-201ENST00000417088 FAM86B2P0C5J1 330 aa16.87■□□□□ 0.29
RPS28-201ENST00000417088 ADD1P35611 737 aaKnown RBP16.87■□□□□ 0.29
RPS28-201ENST00000417088 PAK2Q13177 524 aa16.87■□□□□ 0.29
RPS28-201ENST00000417088 CAMK1Q14012 370 aa16.87■□□□□ 0.29
RPS28-201ENST00000417088 PFKFB3Q16875 520 aaPredicted RBP16.87■□□□□ 0.29
RPS28-201ENST00000417088 JAKMIP3Q5VZ66 844 aa16.87■□□□□ 0.29
RPS28-201ENST00000417088 CENPQQ7L2Z9 268 aaPredicted RBP16.87■□□□□ 0.29
RPS28-201ENST00000417088 PLA2G4DQ86XP0 818 aa16.87■□□□□ 0.29
RPS28-201ENST00000417088 CRYGNQ8WXF5 182 aa16.87■□□□□ 0.29
RPS28-201ENST00000417088 TMX1Q9H3N1 280 aa16.87■□□□□ 0.29
RPS28-201ENST00000417088 PLAGL2Q9UPG8 496 aa16.87■□□□□ 0.29
RPS28-201ENST00000417088 ATG2AQ2TAZ0 1938 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 IGLV3-22A0A075B6J6 115 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 BACH1O14867 736 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 CYP3A4P08684 503 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 HMGB1P09429 215 aaKnown RBP16.86■□□□□ 0.29
RPS28-201ENST00000417088 STAG3L1P0CL83 205 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 SCG2P13521 617 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 CPA1P15085 419 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 DNAJB1P25685 340 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 DLX2Q07687 328 aaPredicted RBP16.86■□□□□ 0.29
RPS28-201ENST00000417088 TMEM266Q2M3C6 531 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 FAM160B1Q5W0V3 765 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 CCDC60Q8IWA6 550 aaPredicted RBP16.86■□□□□ 0.29
RPS28-201ENST00000417088 KIAA0319LQ8IZA0 1049 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 ATP8B4Q8TF62 1192 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 P2RX5Q93086 422 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 CDHR5Q9HBB8 845 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 NAP1L2Q9ULW6 460 aaPredicted RBP16.86■□□□□ 0.29
RPS28-201ENST00000417088 FAM50BQ9Y247 325 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 HCN4Q9Y3Q4 1203 aa16.86■□□□□ 0.29
RPS28-201ENST00000417088 ARIH1Q9Y4X5 557 aaPredicted RBP16.86■□□□□ 0.29
RPS28-201ENST00000417088 CDC45O75419 566 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 CSPG5O95196 566 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 ITGB1P05556 798 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 ATP4AP20648 1035 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 GTF2F1P35269 517 aaKnown RBP eCLIP16.85■□□□□ 0.29
RPS28-201ENST00000417088 GATMP50440 423 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 METAP2P50579 478 aaKnown RBP eCLIP16.85■□□□□ 0.292e-7■□□□□ 11
RPS28-201ENST00000417088 ZP2Q05996 745 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 APOBRQ0VD83 1088 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 NFX1Q12986 1120 aaKnown RBP16.85■□□□□ 0.29
RPS28-201ENST00000417088 PAN2Q504Q3 1202 aaKnown RBP16.85■□□□□ 0.29
RPS28-201ENST00000417088 NAALADL2Q58DX5 795 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 ZNF484Q5JVG2 852 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 SWSAP1Q6NVH7 229 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 MIS18BP1Q6P0N0 1132 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 PDXDC2PQ6P474 469 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 SPPL3Q8TCT6 385 aa16.85■□□□□ 0.29
RPS28-201ENST00000417088 KCNB2Q92953 911 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms