RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 GRK7Q8WTQ7 553 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 CELF1Q92879 486 aaKnown RBP13.93□□□□□ -0.18
SCN1B-202ENST00000415950 ATP6V1G3Q96LB4 118 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 RNPC3Q96LT9 517 aaKnown RBP13.93□□□□□ -0.18
SCN1B-202ENST00000415950 ANO3Q9BYT9 981 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 CUEDC2Q9H467 287 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 STK36Q9NRP7 1315 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 USP17L5A8MUK1 530 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 TRPA1O75762 1119 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 GSTA1P08263 222 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 PDHA1P08559 390 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 GSTA2P09210 222 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 CORO7P57737 925 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 SGO2Q562F6 1265 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 CCDC93Q567U6 631 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 GLYCTKQ8IVS8 523 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 SH3RF3Q8TEJ3 882 aaPredicted RBP13.92□□□□□ -0.18
SCN1B-202ENST00000415950 IL17RAQ96F46 866 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 RUNDC3BQ96NL0 473 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 SH2D3AQ9BRG2 576 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 HPSEQ9Y251 543 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 DKC1O60832 514 aaKnown RBP eCLIP13.92□□□□□ -0.18
SCN1B-202ENST00000415950 INHBAP08476 426 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 STAT3P40763 770 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 EARS2Q5JPH6 523 aaKnown RBP13.92□□□□□ -0.18
SCN1B-202ENST00000415950 HIPK4Q8NE63 616 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 CELF4Q9BZC1 486 aaKnown RBP13.92□□□□□ -0.18
SCN1B-202ENST00000415950 SLAIN2Q9P270 581 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.92□□□□□ -0.18
SCN1B-202ENST00000415950 ALKQ9UM73 1620 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 NPHP3-ACAD11A0A0J9YXS1 232 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 UBAP1LF5GYI3 381 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 SGK1O00141 431 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 BMP6P22004 513 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 CTTNQ14247 550 aaKnown RBP13.92□□□□□ -0.18
SCN1B-202ENST00000415950 CXorf38Q8TB03 319 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.92□□□□□ -0.18
SCN1B-202ENST00000415950 TRIM51Q9BSJ1 452 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 XAB2Q9HCS7 855 aaKnown RBP13.92□□□□□ -0.18
SCN1B-202ENST00000415950 TYW1Q9NV66 732 aaKnown RBP13.92□□□□□ -0.18
SCN1B-202ENST00000415950 SRP68Q9UHB9 627 aaKnown RBP13.92□□□□□ -0.18
SCN1B-202ENST00000415950 TRPC6Q9Y210 931 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 ARHGAP31Q2M1Z3 1444 aa13.92□□□□□ -0.18
SCN1B-202ENST00000415950 TCHHQ07283 1943 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 GOLGA8SH3BPF8 625 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 SMIM22K7EJ46 135 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 MTM1Q13496 603 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 NKX1-1Q15270 411 aaPredicted RBP13.91□□□□□ -0.18
SCN1B-202ENST00000415950 SLFN13Q68D06 897 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 RSRC2Q7L4I2 434 aaKnown RBP13.91□□□□□ -0.18
SCN1B-202ENST00000415950 SRRM1Q8IYB3 904 aaKnown RBP13.91□□□□□ -0.18
SCN1B-202ENST00000415950 POMGNT1Q8WZA1 660 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 SPDL1Q96EA4 605 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 VCX3AQ9NNX9 186 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 ANKFY1Q9P2R3 1169 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 PTPRMP28827 1452 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 LRRIQ4A6NIV6 560 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 TTI1O43156 1089 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 ZRANB2O95218 330 aaKnown RBP eCLIP13.91□□□□□ -0.18
SCN1B-202ENST00000415950 IRX4P78413 519 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 HADHQ16836 314 aaKnown RBP13.91□□□□□ -0.18
SCN1B-202ENST00000415950 ZNF473Q8WTR7 871 aaKnown RBP13.91□□□□□ -0.18
SCN1B-202ENST00000415950 HAUS1Q96CS2 278 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 NCAPGQ9BPX3 1015 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 CXorf56Q9H5V9 222 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 RNF14Q9UBS8 474 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 RNF8O76064 485 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 GDF11O95390 407 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 IFRD2Q12894 506 aaPredicted RBP13.91□□□□□ -0.18
SCN1B-202ENST00000415950 GALNT17Q6IS24 598 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 LARGE2Q8N3Y3 721 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.91□□□□□ -0.18
SCN1B-202ENST00000415950 PPWD1Q96BP3 646 aaKnown RBP13.91□□□□□ -0.18
SCN1B-202ENST00000415950 MAP3K14Q99558 947 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 A2ML1A8K2U0 1454 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 NRKQ7Z2Y5 1582 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 POTEFA5A3E0 1075 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 GPC4O75487 556 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 POTEIP0CG38 1075 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 KLRC1P26715 233 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 IL6STP40189 918 aaPredicted RBP13.91□□□□□ -0.18
SCN1B-202ENST00000415950 POTEGQ6S5H5 508 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 POTEEQ6S8J3 1075 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 RFX8Q6ZV50 586 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 UNC13DQ70J99 1090 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 PACS2Q86VP3 889 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 FBXO11Q86XK2 927 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 NME8Q8N427 588 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 CYTH2Q99418 400 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 ISCA1Q9BUE6 129 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 PALLDQ8WX93 1383 aa13.91□□□□□ -0.18
SCN1B-202ENST00000415950 PPP2R2AP63151 447 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 MAP3K21Q5TCX8 1036 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 PDZD8Q8NEN9 1154 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 HOOK2Q96ED9 719 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 NACA2Q9H009 215 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 TAF1DQ9H5J8 278 aaPredicted RBP13.9□□□□□ -0.18
SCN1B-202ENST00000415950 ZNF408Q9H9D4 720 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 IFT122Q9HBG6 1241 aa13.9□□□□□ -0.18
SCN1B-202ENST00000415950 CPDO75976 1380 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms