RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.33■■■□□ 2.13
HLA-C-204ENST00000415537 HBP1O60381 514 aa28.33■■■□□ 2.13
HLA-C-204ENST00000415537 GRB10Q13322 594 aa28.33■■■□□ 2.13
HLA-C-204ENST00000415537 LPIN1Q14693 890 aa28.33■■■□□ 2.13
HLA-C-204ENST00000415537 SKIV2LQ15477 1246 aaKnown RBP28.33■■■□□ 2.13
HLA-C-204ENST00000415537 TJAP1Q5JTD0 557 aa28.33■■■□□ 2.13
HLA-C-204ENST00000415537 ZNF746Q6NUN9 644 aaPredicted RBP28.33■■■□□ 2.13
HLA-C-204ENST00000415537 SWSAP1Q6NVH7 229 aa28.33■■■□□ 2.13
HLA-C-204ENST00000415537 CCDC60Q8IWA6 550 aaPredicted RBP28.33■■■□□ 2.13
HLA-C-204ENST00000415537 ATXN2LQ8WWM7 1075 aaKnown RBP28.33■■■□□ 2.13
HLA-C-204ENST00000415537 YME1L1Q96TA2 773 aa28.33■■■□□ 2.13
HLA-C-204ENST00000415537 C22orf23Q9BZE7 217 aa28.33■■■□□ 2.13
HLA-C-204ENST00000415537 LOXHD1Q8IVV2 1947 aa28.32■■■□□ 2.12
HLA-C-204ENST00000415537 USP11P51784 963 aa28.32■■■□□ 2.12
HLA-C-204ENST00000415537 ERVK-21P61565 698 aa28.32■■■□□ 2.12
HLA-C-204ENST00000415537 HTRA4P83105 476 aaPredicted RBP28.32■■■□□ 2.12
HLA-C-204ENST00000415537 KRT76Q01546 638 aa28.32■■■□□ 2.12
HLA-C-204ENST00000415537 FBXO47Q5MNV8 452 aa28.32■■■□□ 2.12
HLA-C-204ENST00000415537 CKAP2LQ8IYA6 745 aa28.32■■■□□ 2.12
HLA-C-204ENST00000415537 SMAP1Q8IYB5 467 aaPredicted RBP28.32■■■□□ 2.12
HLA-C-204ENST00000415537 ATP8B4Q8TF62 1192 aa28.32■■■□□ 2.12
HLA-C-204ENST00000415537 PCDHA4Q9UN74 947 aa28.32■■■□□ 2.12
HLA-C-204ENST00000415537 COL4A4P53420 1690 aaPredicted RBP28.32■■■□□ 2.12
HLA-C-204ENST00000415537 CENPBP07199 599 aaPredicted RBP28.31■■■□□ 2.12
HLA-C-204ENST00000415537 MTHFD1LQ6UB35 978 aa28.31■■■□□ 2.12
HLA-C-204ENST00000415537 TSHZ1Q6ZSZ6 1077 aa28.31■■■□□ 2.12
HLA-C-204ENST00000415537 SAMM50Q9Y512 469 aa28.31■■■□□ 2.12
HLA-C-204ENST00000415537 TRPV2Q9Y5S1 764 aa28.31■■■□□ 2.12
HLA-C-204ENST00000415537 PRRC2BQ5JSZ5 2229 aaKnown RBP28.31■■■□□ 2.12
HLA-C-204ENST00000415537 SMIM35A0A1B0GVV1 85 aa28.3■■■□□ 2.12
HLA-C-204ENST00000415537 CDKL5O76039 1030 aa28.3■■■□□ 2.12
HLA-C-204ENST00000415537 PSAPP07602 524 aa28.3■■■□□ 2.12
HLA-C-204ENST00000415537 ANAPC15P60006 121 aa28.3■■■□□ 2.12
HLA-C-204ENST00000415537 TMEM62Q0P6H9 643 aa28.3■■■□□ 2.12
HLA-C-204ENST00000415537 KRT40Q6A162 431 aa28.3■■■□□ 2.12
HLA-C-204ENST00000415537 NME8Q8N427 588 aa28.3■■■□□ 2.12
HLA-C-204ENST00000415537 GDPD5Q8WTR4 605 aa28.3■■■□□ 2.12
HLA-C-204ENST00000415537 SLKQ9H2G2 1235 aaPredicted RBP28.3■■■□□ 2.12
HLA-C-204ENST00000415537 PCDHA10Q9Y5I2 948 aa28.3■■■□□ 2.12
HLA-C-204ENST00000415537 COL1A2P08123 1366 aa28.29■■■□□ 2.12
HLA-C-204ENST00000415537 EIF5BO60841 1220 aaKnown RBP28.29■■■□□ 2.12
HLA-C-204ENST00000415537 KLRC1P26715 233 aa28.29■■■□□ 2.12
HLA-C-204ENST00000415537 MRPS5P82675 430 aaKnown RBP28.29■■■□□ 2.12
HLA-C-204ENST00000415537 ZNF484Q5JVG2 852 aa28.29■■■□□ 2.12
HLA-C-204ENST00000415537 BLIDQ8IZY5 108 aa28.29■■■□□ 2.12
HLA-C-204ENST00000415537 FAM177A1Q8N128 213 aaPredicted RBP28.29■■■□□ 2.12
HLA-C-204ENST00000415537 TBCKQ8TEA7 893 aa28.29■■■□□ 2.12
HLA-C-204ENST00000415537 SUGCTQ9HAC7 445 aa28.29■■■□□ 2.12
HLA-C-204ENST00000415537 SQORQ9Y6N5 450 aa28.29■■■□□ 2.12
HLA-C-204ENST00000415537 EVPLQ92817 2033 aa28.29■■■□□ 2.12
HLA-C-204ENST00000415537 TRANK1O15050 2925 aa28.29■■■□□ 2.12
HLA-C-204ENST00000415537 WDR81Q562E7 1941 aa28.28■■■□□ 2.12
HLA-C-204ENST00000415537 LPXNO60711 386 aa28.28■■■□□ 2.12
HLA-C-204ENST00000415537 GALNT17Q6IS24 598 aa28.28■■■□□ 2.12
HLA-C-204ENST00000415537 SP7Q8TDD2 431 aaPredicted RBP28.28■■■□□ 2.12
HLA-C-204ENST00000415537 BBXQ8WY36 941 aaPredicted RBP28.28■■■□□ 2.12
HLA-C-204ENST00000415537 LENG9Q96B70 501 aa28.28■■■□□ 2.12
HLA-C-204ENST00000415537 CELF4Q9BZC1 486 aaKnown RBP28.28■■■□□ 2.12
HLA-C-204ENST00000415537 LMCD1Q9NZU5 365 aa28.28■■■□□ 2.12
HLA-C-204ENST00000415537 MAFBQ9Y5Q3 323 aaPredicted RBP28.28■■■□□ 2.12
HLA-C-204ENST00000415537 SCRN1Q12765 414 aa28.27■■■□□ 2.12
HLA-C-204ENST00000415537 ANKRD1Q15327 319 aa28.27■■■□□ 2.12
HLA-C-204ENST00000415537 TRMT1LQ7Z2T5 733 aaKnown RBP28.27■■■□□ 2.12
HLA-C-204ENST00000415537 IL27Q8NEV9 243 aa28.27■■■□□ 2.12
HLA-C-204ENST00000415537 FBXO22Q8NEZ5 403 aa28.27■■■□□ 2.12
HLA-C-204ENST00000415537 ASB2Q96Q27 587 aa28.27■■■□□ 2.12
HLA-C-204ENST00000415537 C17orf80Q9BSJ5 609 aa28.27■■■□□ 2.12
HLA-C-204ENST00000415537 GABBR1Q9UBS5 961 aa28.27■■■□□ 2.12
HLA-C-204ENST00000415537 WDR64B1ANS9 1081 aa28.26■■■□□ 2.11
HLA-C-204ENST00000415537 ENPP3O14638 875 aa28.26■■■□□ 2.11
HLA-C-204ENST00000415537 MSH4O15457 936 aa28.26■■■□□ 2.11
HLA-C-204ENST00000415537 XBP1P17861 261 aa28.26■■■□□ 2.11
HLA-C-204ENST00000415537 CD52P31358 61 aa28.26■■■□□ 2.11
HLA-C-204ENST00000415537 AIFM3Q96NN9 605 aa28.26■■■□□ 2.11
HLA-C-204ENST00000415537 SAMD11Q96NU1 681 aa28.26■■■□□ 2.11
HLA-C-204ENST00000415537 NLRC5Q86WI3 1866 aa28.25■■■□□ 2.11
HLA-C-204ENST00000415537 GAS7O60861 476 aa28.25■■■□□ 2.11
HLA-C-204ENST00000415537 ATP4AP20648 1035 aa28.25■■■□□ 2.11
HLA-C-204ENST00000415537 DAGLBQ8NCG7 672 aa28.25■■■□□ 2.11
HLA-C-204ENST00000415537 IL17RAQ96F46 866 aa28.25■■■□□ 2.11
HLA-C-204ENST00000415537 RIT2Q99578 217 aa28.25■■■□□ 2.11
HLA-C-204ENST00000415537 TEKT3Q9BXF9 490 aa28.25■■■□□ 2.11
HLA-C-204ENST00000415537 FTHL17Q9BXU8 183 aa28.25■■■□□ 2.11
HLA-C-204ENST00000415537 AGO3Q9H9G7 860 aaKnown RBP28.25■■■□□ 2.11
HLA-C-204ENST00000415537 TPCN1Q9ULQ1 816 aa28.25■■■□□ 2.11
HLA-C-204ENST00000415537 CEP131Q9UPN4 1083 aa28.25■■■□□ 2.11
HLA-C-204ENST00000415537 VCANP13611 3396 aa28.25■■■□□ 2.11
HLA-C-204ENST00000415537 IGSF9BQ9UPX0 1349 aa28.24■■■□□ 2.11
HLA-C-204ENST00000415537 PFKFB2O60825 505 aa28.24■■■□□ 2.11
HLA-C-204ENST00000415537 PAK2Q13177 524 aa28.24■■■□□ 2.11
HLA-C-204ENST00000415537 AAK1Q2M2I8 961 aa28.24■■■□□ 2.11
HLA-C-204ENST00000415537 LRCH2Q5VUJ6 765 aa28.24■■■□□ 2.11
HLA-C-204ENST00000415537 FAM167AQ96KS9 214 aa28.24■■■□□ 2.11
HLA-C-204ENST00000415537 DISC1Q9NRI5 854 aa28.24■■■□□ 2.11
HLA-C-204ENST00000415537 PADI3Q9ULW8 664 aa28.24■■■□□ 2.11
HLA-C-204ENST00000415537 GINS2Q9Y248 185 aa28.24■■■□□ 2.11
HLA-C-204ENST00000415537 KDM3AQ9Y4C1 1321 aa28.23■■■□□ 2.11
HLA-C-204ENST00000415537 M0R2N6 131 aa28.23■■■□□ 2.11
HLA-C-204ENST00000415537 EDIL3O43854 480 aa28.23■■■□□ 2.11
HLA-C-204ENST00000415537 SFNP31947 248 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms