RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 HSP90AA4PQ58FG1 418 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 CHADLQ6NUI6 762 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 KCNK18Q7Z418 384 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 ANKRD35Q8N283 1001 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 SHCBP1Q8NEM2 672 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 RDM1Q8NG50 284 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 EXOC4Q96A65 974 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 NAPGQ99747 312 aaPredicted RBP12.79□□□□□ -0.36
RFFL-205ENST00000415395 MOV10L1Q9BXT6 1211 aaKnown RBP12.79□□□□□ -0.36
RFFL-205ENST00000415395 LOC102724159A0A0B4J2E5 919 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 B4DLN1 442 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 EML1O00423 815 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 MYCLP12524 364 aaPredicted RBP12.79□□□□□ -0.36
RFFL-205ENST00000415395 SLC12A3P55017 1021 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 PWP2Q15269 919 aaKnown RBP12.79□□□□□ -0.36
RFFL-205ENST00000415395 GNPTABQ3T906 1256 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 KLHL10Q6JEL2 608 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 ANKRD23Q86SG2 305 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 SYT2Q8N9I0 419 aaPredicted RBP12.79□□□□□ -0.36
RFFL-205ENST00000415395 MSANTD4Q8NCY6 345 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 EHBP1Q8NDI1 1231 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 DDX12PQ92771 950 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 DESI2Q9BSY9 194 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 UNC45AQ9H3U1 944 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 MROH8Q9H579 483 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 NMRK2Q9NPI5 230 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 TCEAL9Q9UHQ7 104 aa12.79□□□□□ -0.36
RFFL-205ENST00000415395 LRRC37A2A6NM11 1700 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 CTAGE15A4D2H0 777 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 POTEFA5A3E0 1075 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 SOWAHDA6NJG2 315 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 N4BP3O15049 544 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 POLR3GO15318 223 aaPredicted RBP12.78□□□□□ -0.36
RFFL-205ENST00000415395 DHX15O43143 795 aaKnown RBP12.78□□□□□ -0.36
RFFL-205ENST00000415395 SEC31AO94979 1220 aaKnown RBP12.78□□□□□ -0.36
RFFL-205ENST00000415395 EYA4O95677 639 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 CTAGE8P0CG41 777 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 CD44P16070 742 aaKnown RBP12.78□□□□□ -0.36
RFFL-205ENST00000415395 SFNP31947 248 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 KRT76Q01546 638 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 PDE4DQ08499 809 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 PAK1Q13153 545 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 LONRF2Q1L5Z9 754 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 ZNF569Q5MCW4 686 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 SPRYD7Q5W111 196 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 CTAGE6Q86UF2 777 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 NCAPG2Q86XI2 1143 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 CTAGE4Q8IX94 777 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 ADSSL1Q8N142 457 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 DHTKD1Q96HY7 919 aaPredicted RBP12.78□□□□□ -0.36
RFFL-205ENST00000415395 MPHOSPH6Q99547 160 aaKnown RBP12.78□□□□□ -0.36
RFFL-205ENST00000415395 PAGR1Q9BTK6 254 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 MRPL44Q9H9J2 332 aaKnown RBP12.78□□□□□ -0.36
RFFL-205ENST00000415395 LZTFL1Q9NQ48 299 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 RBPJLQ9UBG7 517 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 RAB21Q9UL25 225 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 WDR81Q562E7 1941 aa12.78□□□□□ -0.36
RFFL-205ENST00000415395 NFASCO94856 1347 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 ZNFX1Q9P2E3 1918 aaKnown RBP12.77□□□□□ -0.36
RFFL-205ENST00000415395 CCL15-CCL14A0A0B4J2E2 113 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 TESPA1A2RU30 521 aaPredicted RBP12.77□□□□□ -0.36
RFFL-205ENST00000415395 LRRC10BA6NIK2 292 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 E9PMD0 336 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 PSMA7O14818 248 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 FANCGO15287 622 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 ITGBL1O95965 494 aaPredicted RBP12.77□□□□□ -0.36
RFFL-205ENST00000415395 ERCC3P19447 782 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 GCLCP48506 637 aaPredicted RBP12.77□□□□□ -0.36
RFFL-205ENST00000415395 JAK3P52333 1124 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 EHHADHQ08426 723 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 STXBP2Q15833 593 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 CCL15Q16663 113 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 APTXQ7Z2E3 356 aaKnown RBP12.77□□□□□ -0.36
RFFL-205ENST00000415395 MIER3Q7Z3K6 550 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 CCDC65Q8IXS2 484 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 NOC3LQ8WTT2 800 aaKnown RBP12.77□□□□□ -0.36
RFFL-205ENST00000415395 DNAJC19Q96DA6 116 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 RPGRIP1Q96KN7 1286 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 UIMC1Q96RL1 719 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 SENP7Q9BQF6 1050 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 FUT8Q9BYC5 575 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 KCND2Q9NZV8 630 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 CTNND2Q9UQB3 1225 aa12.77□□□□□ -0.36
RFFL-205ENST00000415395 TEX33O43247 280 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 SLITRK3O94933 977 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 P4HBP07237 508 aaKnown RBP12.76□□□□□ -0.37
RFFL-205ENST00000415395 CYP11B2P19099 503 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 EDNRBP24530 442 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 CASP14P31944 242 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 ICAM3P32942 547 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 PRCPP42785 496 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 ALDH5A1P51649 535 aaPredicted RBP12.76□□□□□ -0.37
RFFL-205ENST00000415395 ERVK-9P63128 1117 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 ERVK-24P63145 666 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 CCNA1P78396 465 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 ITGB3BPQ13352 177 aaPredicted RBP12.76□□□□□ -0.37
RFFL-205ENST00000415395 MAP9Q49MG5 647 aa12.76□□□□□ -0.37
RFFL-205ENST00000415395 HSP90B2PQ58FF3 399 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms