RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 DHX37Q8IY37 1157 aaKnown RBP17.31■□□□□ 0.36
SHMT2-202ENST00000414700 DNAJC5GQ8N7S2 189 aa17.31■□□□□ 0.36
SHMT2-202ENST00000414700 GIMAP8Q8ND71 665 aaPredicted RBP17.31■□□□□ 0.36
SHMT2-202ENST00000414700 ANKRD7Q92527 254 aa17.31■□□□□ 0.36
SHMT2-202ENST00000414700 SH2D3AQ9BRG2 576 aa17.31■□□□□ 0.36
SHMT2-202ENST00000414700 CUEDC2Q9H467 287 aa17.31■□□□□ 0.36
SHMT2-202ENST00000414700 ZNF862O60290 1169 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 ATG7O95352 703 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 SSBP05455 408 aaKnown RBP eCLIP17.3■□□□□ 0.36
SHMT2-202ENST00000414700 QARSP47897 775 aaKnown RBP17.3■□□□□ 0.36
SHMT2-202ENST00000414700 ARHGAP1Q07960 439 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 ZNF830Q96NB3 372 aaPredicted RBP17.3■□□□□ 0.36
SHMT2-202ENST00000414700 BHMT2Q9H2M3 363 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 GABBR1Q9UBS5 961 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 TUBE1Q9UJT0 475 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 STK24Q9Y6E0 443 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 MYMKA6NI61 221 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 ADCY5O95622 1261 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 SUPT20HL2P0C7V6 817 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 PLA2G4BP0C869 781 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 ELNP15502 786 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 SLC12A3P55017 1021 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 MAP2K1Q02750 393 aaPredicted RBP17.3■□□□□ 0.36
SHMT2-202ENST00000414700 SV2BQ7L1I2 683 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 SPATA20Q8TB22 786 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 SPATA33Q96N06 139 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 PCYT2Q99447 389 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 TRIM9Q9C026 710 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 ZSWIM4Q9H7M6 989 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 DNM3Q9UQ16 869 aa17.3■□□□□ 0.36
SHMT2-202ENST00000414700 SLC26A4O43511 780 aa17.29■□□□□ 0.36
SHMT2-202ENST00000414700 FKTNO75072 461 aa17.29■□□□□ 0.36
SHMT2-202ENST00000414700 TCF7P36402 384 aaPredicted RBP17.29■□□□□ 0.36
SHMT2-202ENST00000414700 SARSP49591 514 aaKnown RBP17.29■□□□□ 0.36
SHMT2-202ENST00000414700 TYRO3Q06418 890 aa17.29■□□□□ 0.36
SHMT2-202ENST00000414700 DYMQ7RTS9 669 aa17.29■□□□□ 0.36
SHMT2-202ENST00000414700 TRPV1Q8NER1 839 aa17.29■□□□□ 0.36
SHMT2-202ENST00000414700 RDM1Q8NG50 284 aa17.29■□□□□ 0.36
SHMT2-202ENST00000414700 NEK9Q8TD19 979 aa17.29■□□□□ 0.36
SHMT2-202ENST00000414700 GPR20Q99678 358 aa17.29■□□□□ 0.36
SHMT2-202ENST00000414700 SRRDQ9UH36 339 aa17.29■□□□□ 0.36
SHMT2-202ENST00000414700 HOOK1Q9UJC3 728 aaKnown RBP17.29■□□□□ 0.36
SHMT2-202ENST00000414700 NPHP3-ACAD11A0A0J9YXS1 232 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 BACH1O14867 736 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 GTPBP6O43824 516 aaPredicted RBP17.28■□□□□ 0.36
SHMT2-202ENST00000414700 PSAPP07602 524 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 BMP6P22004 513 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 PSMC5P62195 406 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 IRX5P78411 483 aaPredicted RBP17.28■□□□□ 0.36
SHMT2-202ENST00000414700 RAD51AP2Q09MP3 1159 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 DUSP28Q4G0W2 176 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 TRIM50Q86XT4 487 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 NOP56O00567 594 aaKnown RBP17.28■□□□□ 0.36
SHMT2-202ENST00000414700 ATP4AP20648 1035 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
SHMT2-202ENST00000414700 ARSHQ5FYA8 562 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 NT5DC1Q5TFE4 455 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 MIS18BP1Q6P0N0 1132 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 C17orf53Q8N3J3 647 aaPredicted RBP17.28■□□□□ 0.36
SHMT2-202ENST00000414700 SMARCE1Q969G3 411 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 BEGAINQ9BUH8 593 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 MAGEF1Q9HAY2 307 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 POLD4Q9HCU8 107 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 MAN1B1Q9UKM7 699 aa17.28■□□□□ 0.36
SHMT2-202ENST00000414700 LOXHD1Q8IVV2 1947 aa17.27■□□□□ 0.36
SHMT2-202ENST00000414700 IGKV6D-21A0A0A0MT36 114 aa17.27■□□□□ 0.36
SHMT2-202ENST00000414700 EYA4O95677 639 aa17.27■□□□□ 0.36
SHMT2-202ENST00000414700 GH1P01241 217 aa17.27■□□□□ 0.36
SHMT2-202ENST00000414700 CYP11B2P19099 503 aa17.27■□□□□ 0.36
SHMT2-202ENST00000414700 YWHABP31946 246 aaKnown RBP17.27■□□□□ 0.36
SHMT2-202ENST00000414700 TNFAIP2Q03169 654 aa17.27■□□□□ 0.36
SHMT2-202ENST00000414700 IQSEC1Q6DN90 963 aa17.27■□□□□ 0.36
SHMT2-202ENST00000414700 ANO5Q75V66 913 aa17.27■□□□□ 0.36
SHMT2-202ENST00000414700 C4orf19Q8IY42 314 aa17.27■□□□□ 0.36
SHMT2-202ENST00000414700 SYT2Q8N9I0 419 aaPredicted RBP17.27■□□□□ 0.36
SHMT2-202ENST00000414700 SEPT1Q8WYJ6 367 aa17.27■□□□□ 0.36
SHMT2-202ENST00000414700 DDX12PQ92771 950 aa17.27■□□□□ 0.36
SHMT2-202ENST00000414700 CCDC34Q96HJ3 373 aa17.27■□□□□ 0.36
SHMT2-202ENST00000414700 NACC1Q96RE7 527 aa17.27■□□□□ 0.36
SHMT2-202ENST00000414700 WBP1LQ9NX94 342 aa17.27■□□□□ 0.36
SHMT2-202ENST00000414700 IGSF9BQ9UPX0 1349 aa17.27■□□□□ 0.35
SHMT2-202ENST00000414700 KLRC4O43908 158 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 STBD1O95210 358 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 TPM3P06753 285 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 MUTP22033 750 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 DPCR1Q3MIW9 517 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 PLA2G4FQ68DD2 849 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 GPBP1Q86WP2 473 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 AFG1LQ8WV93 481 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 ERO1AQ96HE7 468 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 C7orf25Q9BPX7 421 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 RUSC1Q9BVN2 902 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 ZNF302Q9NR11 478 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 GNEQ9Y223 722 aaKnown RBP17.26■□□□□ 0.35
SHMT2-202ENST00000414700 MAFBQ9Y5Q3 323 aaPredicted RBP17.26■□□□□ 0.35
SHMT2-202ENST00000414700 ARID2Q68CP9 1835 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 SPDYE4A6NLX3 237 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 CTIFO43310 598 aaKnown RBP17.26■□□□□ 0.35
SHMT2-202ENST00000414700 LYPLA2O95372 231 aa17.26■□□□□ 0.35
SHMT2-202ENST00000414700 CCDC192P0DO97 292 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms