RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 MYH6P13533 1939 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 CCDC85CA6NKD9 419 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 HIP1O00291 1037 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 LCE2BO14633 110 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 RANBP6O60518 1105 aaKnown RBP5.75□□□□□ -1.49
VPS41-205ENST00000414632 NMT2O60551 498 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 TSPY3P0CV98 308 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 TSPY8P0CW00 308 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 BCRP11274 1271 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 ESRRAP11474 423 aaPredicted RBP5.75□□□□□ -1.49
VPS41-205ENST00000414632 VCAM1P19320 739 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 CHMLP26374 656 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 PSMC4P43686 418 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 GIPRP48546 466 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 IRX3P78415 501 aaPredicted RBP5.75□□□□□ -1.49
VPS41-205ENST00000414632 TFAP4Q01664 338 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 PTH1RQ03431 593 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 PDE4BQ07343 736 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 PABPC4Q13310 644 aaKnown RBP eCLIP5.75□□□□□ -1.49
VPS41-205ENST00000414632 PERM1Q5SV97 790 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 ELMSAN1Q6PJG2 1045 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 RASGRP2Q7LDG7 609 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 OTOP1Q7RTM1 612 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 REC114Q7Z4M0 266 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 TBC1D10CQ8IV04 446 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 ZNF444Q8N0Y2 327 aaPredicted RBP5.75□□□□□ -1.49
VPS41-205ENST00000414632 REXO1Q8N1G1 1221 aaKnown RBP5.75□□□□□ -1.49
VPS41-205ENST00000414632 LRRC47Q8N1G4 583 aaKnown RBP5.75□□□□□ -1.49
VPS41-205ENST00000414632 CEP95Q96GE4 821 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 ERO1AQ96HE7 468 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 ABHD8Q96I13 439 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 TRIM47Q96LD4 638 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 RNPC3Q96LT9 517 aaKnown RBP5.75□□□□□ -1.49
VPS41-205ENST00000414632 NUP88Q99567 741 aaPredicted RBP5.75□□□□□ -1.49
VPS41-205ENST00000414632 SMG9Q9H0W8 520 aaKnown RBP5.75□□□□□ -1.49
VPS41-205ENST00000414632 ZCCHC17Q9NP64 241 aaKnown RBP5.75□□□□□ -1.49
VPS41-205ENST00000414632 SNTG2Q9NY99 539 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 ISY1Q9ULR0 285 aaKnown RBP5.75□□□□□ -1.49
VPS41-205ENST00000414632 TRIM33Q9UPN9 1127 aa5.75□□□□□ -1.49
VPS41-205ENST00000414632 RBBP6Q7Z6E9 1792 aaKnown RBP5.75□□□□□ -1.49
VPS41-205ENST00000414632 NEDD4P46934 1319 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 SMCHD1A6NHR9 2005 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 TSPY2A6NKD2 308 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 C19orf81C9J6K1 198 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 PPFIA3O75145 1194 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 CLSTN1O94985 981 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 BPNT1O95861 308 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 SLC3A2P08195 630 aaKnown RBP5.74□□□□□ -1.49
VPS41-205ENST00000414632 USP14P54578 494 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 SOX10P56693 466 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 HERVK_113P62684 666 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 LACTBP83111 547 aaPredicted RBP5.74□□□□□ -1.49
VPS41-205ENST00000414632 CLCQ05315 142 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 PTPN11Q06124 597 aaPredicted RBP5.74□□□□□ -1.49
VPS41-205ENST00000414632 IKBKEQ14164 716 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 KIF22Q14807 665 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 FAM83BQ5T0W9 1011 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 GK5Q6ZS86 529 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 SV2AQ7L0J3 742 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 CELF2-AS1Q8N7Q2 184 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 TNFRSF25Q93038 417 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 C12orf42Q96LP6 360 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 CCDC17Q96LX7 622 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 EMILIN2Q9BXX0 1053 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 KIAA1683Q9H0B3 1180 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 TXNRD2Q9NNW7 524 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 FBXO28Q9NVF7 368 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 CLIP2Q9UDT6 1046 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 KLF15Q9UIH9 416 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 NAGPAQ9UK23 515 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 GABRQQ9UN88 632 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 STX8Q9UNK0 236 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 PTPN22Q9Y2R2 807 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.74□□□□□ -1.49
VPS41-205ENST00000414632 SLC45A1Q9Y2W3 748 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 TMX2Q9Y320 296 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 PTCH2Q9Y6C5 1203 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 BRCA2P51587 3418 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 FRMPD3Q5JV73 1810 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 MYPNQ86TC9 1320 aa5.74□□□□□ -1.49
VPS41-205ENST00000414632 IGKV6D-41A0A0C4DH26 115 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 ADARB2-AS1A8MUL3 147 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 B4E1Z4 1266 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 ZNF213O14771 459 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 TNPO2O14787 897 aaKnown RBP5.73□□□□□ -1.49
VPS41-205ENST00000414632 SGSM2O43147 1006 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 CNMDO75829 334 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 FLOT1O75955 427 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 SNRPBP14678 240 aaKnown RBP5.73□□□□□ -1.49
VPS41-205ENST00000414632 CDC27P30260 824 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 HOXA7P31268 230 aaPredicted RBP5.73□□□□□ -1.49
VPS41-205ENST00000414632 ADH7P40394 386 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 PRKCZQ05513 592 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 ZNF252P-AS1Q0IIN9 211 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 PLS1Q14651 629 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 ALX1Q15699 326 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 AKNAD1Q5T1N1 836 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 WDR78Q5VTH9 848 aa5.73□□□□□ -1.49
VPS41-205ENST00000414632 FBXO46Q6PJ61 603 aaPredicted RBP5.73□□□□□ -1.49
VPS41-205ENST00000414632 CATSPERGQ6ZRH7 1159 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms