RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 RSPH3Q86UC2 560 aa19.11■□□□□ 0.65
SCAMP4-204ENST00000414057 NOSTRINQ8IVI9 506 aa19.11■□□□□ 0.65
SCAMP4-204ENST00000414057 DIS3L2Q8IYB7 885 aaKnown RBP19.11■□□□□ 0.65
SCAMP4-204ENST00000414057 DBF4BQ8NFT6 615 aa19.11■□□□□ 0.65
SCAMP4-204ENST00000414057 LMBR1Q8WVP7 490 aa19.11■□□□□ 0.65
SCAMP4-204ENST00000414057 VPS54Q9P1Q0 977 aa19.11■□□□□ 0.65
SCAMP4-204ENST00000414057 SLC9A2Q9UBY0 812 aa19.11■□□□□ 0.65
SCAMP4-204ENST00000414057 GSTTP1A0A1W2PQM5 241 aa19.1■□□□□ 0.65
SCAMP4-204ENST00000414057 TRAK2O60296 914 aa19.1■□□□□ 0.65
SCAMP4-204ENST00000414057 SREBF1P36956 1147 aa19.1■□□□□ 0.65
SCAMP4-204ENST00000414057 ADAM17P78536 824 aa19.1■□□□□ 0.65
SCAMP4-204ENST00000414057 PPFIA1Q13136 1202 aa19.1■□□□□ 0.65
SCAMP4-204ENST00000414057 PLEKHG4Q58EX7 1191 aa19.1■□□□□ 0.65
SCAMP4-204ENST00000414057 USP38Q8NB14 1042 aa19.1■□□□□ 0.65
SCAMP4-204ENST00000414057 ATXN2LQ8WWM7 1075 aaKnown RBP19.1■□□□□ 0.65
SCAMP4-204ENST00000414057 APBB2Q92870 758 aa19.1■□□□□ 0.65
SCAMP4-204ENST00000414057 C6orf50Q9HD87 102 aa19.1■□□□□ 0.65
SCAMP4-204ENST00000414057 TRIP12Q14669 1992 aaPredicted RBP19.1■□□□□ 0.65
SCAMP4-204ENST00000414057 NFASCO94856 1347 aa19.1■□□□□ 0.65
SCAMP4-204ENST00000414057 EYSQ5T1H1 3165 aa19.1■□□□□ 0.65
SCAMP4-204ENST00000414057 ESYT2A0FGR8 921 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 GNA11P29992 359 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 CLK2P49760 499 aaKnown RBP19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 DEFB103AP81534 67 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 KLHL40Q2TBA0 621 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 RPAINQ86UA6 219 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 ARNTL2Q8WYA1 636 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 SPATA32Q96LK8 384 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 KCNJ14Q9UNX9 436 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 TELO2Q9Y4R8 837 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 UNC80Q8N2C7 3258 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 RRN3P2A6NIE6 340 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 CTSHP09668 335 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 POU3F3P20264 500 aaPredicted RBP19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 MARK3P27448 753 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 NLRP5P59047 1200 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 UBE2HP62256 183 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 CCDC85BQ15834 202 aaPredicted RBP19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 TJAP1Q5JTD0 557 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 FAM26DQ5JW98 314 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 FAM173BQ6P4H8 233 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 NIPA1Q7RTP0 329 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 DAGLBQ8NCG7 672 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 CHAMP1Q96JM3 812 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 ZMYND12Q9H0C1 365 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 CERS4Q9HA82 394 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 THEGQ9P2T0 379 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 INSL6Q9Y581 213 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 A0A0C4DFX4 3053 aa19.09■□□□□ 0.65
SCAMP4-204ENST00000414057 GBF1Q92538 1859 aa19.08■□□□□ 0.64
SCAMP4-204ENST00000414057 BTBD18B2RXH4 712 aa19.08■□□□□ 0.64
SCAMP4-204ENST00000414057 MEIS1O00470 390 aa19.08■□□□□ 0.64
SCAMP4-204ENST00000414057 GRIK4Q16099 956 aa19.08■□□□□ 0.64
SCAMP4-204ENST00000414057 RILPL1Q5EBL4 403 aa19.08■□□□□ 0.64
SCAMP4-204ENST00000414057 BICD2Q8TD16 824 aa19.08■□□□□ 0.64
SCAMP4-204ENST00000414057 LEO1Q8WVC0 666 aaPredicted RBP19.08■□□□□ 0.64
SCAMP4-204ENST00000414057 PGBD1Q96JS3 809 aa19.08■□□□□ 0.64
SCAMP4-204ENST00000414057 AGO4Q9HCK5 861 aaKnown RBP19.08■□□□□ 0.64
SCAMP4-204ENST00000414057 TUBE1Q9UJT0 475 aa19.08■□□□□ 0.64
SCAMP4-204ENST00000414057 YEATS4O95619 227 aa19.07■□□□□ 0.64
SCAMP4-204ENST00000414057 SLC26A2P50443 739 aa19.07■□□□□ 0.64
SCAMP4-204ENST00000414057 ACTR2P61160 394 aa19.07■□□□□ 0.64
SCAMP4-204ENST00000414057 JAKMIP3Q5VZ66 844 aa19.07■□□□□ 0.64
SCAMP4-204ENST00000414057 PLPPR4Q7Z2D5 763 aa19.07■□□□□ 0.64
SCAMP4-204ENST00000414057 MYOCDQ8IZQ8 938 aa19.07■□□□□ 0.64
SCAMP4-204ENST00000414057 REXO1Q8N1G1 1221 aaKnown RBP19.07■□□□□ 0.64
SCAMP4-204ENST00000414057 CYP2W1Q8TAV3 490 aa19.07■□□□□ 0.64
SCAMP4-204ENST00000414057 TMEM260Q9NX78 707 aa19.07■□□□□ 0.64
SCAMP4-204ENST00000414057 RCOR1Q9UKL0 485 aa19.07■□□□□ 0.64
SCAMP4-204ENST00000414057 PCDHA4Q9UN74 947 aa19.07■□□□□ 0.64
SCAMP4-204ENST00000414057 ARP10275 920 aa19.06■□□□□ 0.64
SCAMP4-204ENST00000414057 NASPP49321 788 aaPredicted RBP19.06■□□□□ 0.64
SCAMP4-204ENST00000414057 STAT5BP51692 787 aa19.06■□□□□ 0.64
SCAMP4-204ENST00000414057 TCTN1Q2MV58 587 aa19.06■□□□□ 0.64
SCAMP4-204ENST00000414057 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.06■□□□□ 0.64
SCAMP4-204ENST00000414057 MICALL1Q8N3F8 863 aa19.06■□□□□ 0.64
SCAMP4-204ENST00000414057 TET1Q8NFU7 2136 aa19.06■□□□□ 0.64
SCAMP4-204ENST00000414057 TGS1Q96RS0 853 aaKnown RBP19.06■□□□□ 0.64
SCAMP4-204ENST00000414057 USP28Q96RU2 1077 aa19.06■□□□□ 0.64
SCAMP4-204ENST00000414057 IFIH1Q9BYX4 1025 aaKnown RBP19.06■□□□□ 0.64
SCAMP4-204ENST00000414057 GDPD2Q9HCC8 539 aa19.06■□□□□ 0.64
SCAMP4-204ENST00000414057 TRPC6Q9Y210 931 aa19.06■□□□□ 0.64
SCAMP4-204ENST00000414057 MBLAC1A4D2B0 266 aaPredicted RBP19.05■□□□□ 0.64
SCAMP4-204ENST00000414057 CYP3A4P08684 503 aa19.05■□□□□ 0.64
SCAMP4-204ENST00000414057 MRPS5P82675 430 aaKnown RBP19.05■□□□□ 0.64
SCAMP4-204ENST00000414057 SETQ01105 290 aaPredicted RBP19.05■□□□□ 0.64
SCAMP4-204ENST00000414057 NPY5RQ15761 445 aa19.05■□□□□ 0.64
SCAMP4-204ENST00000414057 FAM117BQ6P1L5 589 aa19.05■□□□□ 0.64
SCAMP4-204ENST00000414057 TMCO2Q7Z6W1 182 aaPredicted RBP19.05■□□□□ 0.64
SCAMP4-204ENST00000414057 PLA2G4DQ86XP0 818 aa19.05■□□□□ 0.64
SCAMP4-204ENST00000414057 BLIDQ8IZY5 108 aa19.05■□□□□ 0.64
SCAMP4-204ENST00000414057 KCNG4Q8TDN1 519 aa19.05■□□□□ 0.64
SCAMP4-204ENST00000414057 TFIP11Q9UBB9 837 aaKnown RBP19.05■□□□□ 0.64
SCAMP4-204ENST00000414057 TCEAL9Q9UHQ7 104 aa19.05■□□□□ 0.64
SCAMP4-204ENST00000414057 MTCH2Q9Y6C9 303 aa19.05■□□□□ 0.64
SCAMP4-204ENST00000414057 LCHNA4D1U4 455 aa19.04■□□□□ 0.64
SCAMP4-204ENST00000414057 RFXAPO00287 272 aa19.04■□□□□ 0.64
SCAMP4-204ENST00000414057 ATG7O95352 703 aa19.04■□□□□ 0.64
SCAMP4-204ENST00000414057 INSRRP14616 1297 aa19.04■□□□□ 0.64
SCAMP4-204ENST00000414057 TRAPPC10P48553 1259 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms