RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 PCBP2Q15366 365 aaKnown RBP eCLIP7.05□□□□□ -1.28
NOD1-203ENST00000413433 GRAMD1BQ3KR37 738 aa7.05□□□□□ -1.28
NOD1-203ENST00000413433 TMC3Q7Z5M5 1100 aa7.05□□□□□ -1.28
NOD1-203ENST00000413433 FBXO11Q86XK2 927 aa7.05□□□□□ -1.28
NOD1-203ENST00000413433 KSR1Q8IVT5 923 aa7.05□□□□□ -1.28
NOD1-203ENST00000413433 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.05□□□□□ -1.28
NOD1-203ENST00000413433 AMOTL1Q8IY63 956 aa7.05□□□□□ -1.28
NOD1-203ENST00000413433 C2CD4AQ8NCU7 369 aaPredicted RBP7.05□□□□□ -1.28
NOD1-203ENST00000413433 PANK1Q8TE04 598 aa7.05□□□□□ -1.28
NOD1-203ENST00000413433 PNISRQ8TF01 805 aaKnown RBP7.05□□□□□ -1.28
NOD1-203ENST00000413433 PPM1EQ8WY54 764 aa7.05□□□□□ -1.28
NOD1-203ENST00000413433 SLC5A5Q92911 643 aa7.05□□□□□ -1.28
NOD1-203ENST00000413433 HSPBAP1Q96EW2 488 aa7.05□□□□□ -1.28
NOD1-203ENST00000413433 SCYL1Q96KG9 808 aa7.05□□□□□ -1.28
NOD1-203ENST00000413433 SSBP4Q9BWG4 385 aaPredicted RBP7.05□□□□□ -1.28
NOD1-203ENST00000413433 VTA1Q9NP79 307 aa7.05□□□□□ -1.28
NOD1-203ENST00000413433 C14orf119Q9NWQ9 140 aa7.05□□□□□ -1.28
NOD1-203ENST00000413433 KCNH3Q9ULD8 1083 aa7.05□□□□□ -1.28
NOD1-203ENST00000413433 ZNF652Q9Y2D9 606 aa7.05□□□□□ -1.28
NOD1-203ENST00000413433 LRP5O75197 1615 aa7.05□□□□□ -1.28
NOD1-203ENST00000413433 COL5A2P05997 1499 aaPredicted RBP7.04□□□□□ -1.28
NOD1-203ENST00000413433 TTC21BQ7Z4L5 1316 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 CRB1P82279 1406 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 PTPDC1A2A3K4 754 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 C2orf71A6NGG8 1288 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 TRAF5O00463 557 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 PLSCR1O15162 318 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 NPHP1O15259 732 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 WDHD1O75717 1129 aaPredicted RBP7.04□□□□□ -1.28
NOD1-203ENST00000413433 SLITRK5O94991 958 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 PRAMEF1O95521 474 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 ATP2A2P16615 1042 aaKnown RBP7.04□□□□□ -1.28
NOD1-203ENST00000413433 CYP4F3Q08477 520 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 KIZQ2M2Z5 673 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 E4F1Q66K89 784 aaPredicted RBP7.04□□□□□ -1.28
NOD1-203ENST00000413433 ANKRD34AQ69YU3 496 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 SHISA2Q6UWI4 295 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 LBX2Q6XYB7 198 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 ARHGEF25Q86VW2 580 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 C2orf69Q8N8R5 385 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 CLRN3Q8NCR9 226 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 C1orf162Q8NEQ5 155 aaPredicted RBP7.04□□□□□ -1.28
NOD1-203ENST00000413433 NPLOC4Q8TAT6 608 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 FRS2Q8WU20 508 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 COPS5Q92905 334 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 TTC17Q96AE7 1141 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 FAXDC2Q96IV6 333 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 YIPF2Q9BWQ6 316 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 GPRC5CQ9NQ84 441 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 TAGLN3Q9UI15 199 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 AATKQ6ZMQ8 1374 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 PARD3Q8TEW0 1356 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 ARID1BQ8NFD5 2236 aaPredicted RBP7.04□□□□□ -1.28
NOD1-203ENST00000413433 CRYBG1Q9Y4K1 1723 aa7.04□□□□□ -1.28
NOD1-203ENST00000413433 FRMPD2Q68DX3 1309 aaPredicted RBP7.03□□□□□ -1.28
NOD1-203ENST00000413433 EVC2Q86UK5 1308 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 USP6P35125 1406 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 CCDC66A2RUB6 948 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 EXOC5O00471 708 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 SART1O43290 800 aaKnown RBP7.03□□□□□ -1.28
NOD1-203ENST00000413433 GAS2O43903 313 aaKnown RBP7.03□□□□□ -1.28
NOD1-203ENST00000413433 LTFP02788 710 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 NOP2P46087 812 aaKnown RBP7.03□□□□□ -1.28
NOD1-203ENST00000413433 USP11P51784 963 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 NMIQ13287 307 aaPredicted RBP7.03□□□□□ -1.28
NOD1-203ENST00000413433 GBX1Q14549 363 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 SAFBQ15424 915 aaKnown RBP eCLIP7.03□□□□□ -1.28
NOD1-203ENST00000413433 CLEC16AQ2KHT3 1053 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 INAVAQ3KP66 663 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 COBLL1Q53SF7 1204 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 FMR1NBQ8N0W7 255 aaPredicted RBP7.03□□□□□ -1.28
NOD1-203ENST00000413433 SPICE1Q8N0Z3 855 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 CISD2Q8N5K1 135 aaKnown RBP7.03□□□□□ -1.28
NOD1-203ENST00000413433 DIO2Q92813 273 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 AIFM3Q96NN9 605 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 NUP88Q99567 741 aaPredicted RBP7.03□□□□□ -1.28
NOD1-203ENST00000413433 NAP1L4Q99733 375 aaKnown RBP7.03□□□□□ -1.28
NOD1-203ENST00000413433 MRPL18Q9H0U6 180 aaKnown RBP7.03□□□□□ -1.28
NOD1-203ENST00000413433 NMRK2Q9NPI5 230 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 PRDM10Q9NQV6 1147 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 PCMTD2Q9NV79 361 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 SAP30BPQ9UHR5 308 aaKnown RBP7.03□□□□□ -1.28
NOD1-203ENST00000413433 FAM50BQ9Y247 325 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 DAAM1Q9Y4D1 1078 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 RGPD1P0DJD0 1748 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 ARHGEF28Q8N1W1 1705 aaKnown RBP7.03□□□□□ -1.28
NOD1-203ENST00000413433 NRKQ7Z2Y5 1582 aa7.03□□□□□ -1.28
NOD1-203ENST00000413433 WDR17Q8IZU2 1322 aa7.02□□□□□ -1.28
NOD1-203ENST00000413433 PHRF1Q9P1Y6 1649 aaKnown RBP7.02□□□□□ -1.29
NOD1-203ENST00000413433 TNS1Q9HBL0 1735 aaKnown RBP7.02□□□□□ -1.29
NOD1-203ENST00000413433 RASSF10A6NK89 507 aa7.02□□□□□ -1.29
NOD1-203ENST00000413433 AURKAO14965 403 aa7.02□□□□□ -1.29
NOD1-203ENST00000413433 NRDCO43847 1150 aa7.02□□□□□ -1.29
NOD1-203ENST00000413433 LRRN2O75325 713 aa7.02□□□□□ -1.29
NOD1-203ENST00000413433 CKMP06732 381 aa7.02□□□□□ -1.29
NOD1-203ENST00000413433 RBP3P10745 1247 aa7.02□□□□□ -1.29
NOD1-203ENST00000413433 PHKG2P15735 406 aa7.02□□□□□ -1.29
NOD1-203ENST00000413433 HSPA6P17066 643 aa7.02□□□□□ -1.29
NOD1-203ENST00000413433 KRT85P78386 507 aa7.02□□□□□ -1.29
NOD1-203ENST00000413433 CLUL1Q15846 466 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms