RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 TTLL4Q14679 1199 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 NCAPHQ15003 741 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 LY6KQ17RY6 165 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 COBLL1Q53SF7 1204 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 CT47A1Q5JQC4 288 aaPredicted RBP7.4□□□□□ -1.22
VPS41-204ENST00000413141 RINT1Q6NUQ1 792 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 TAPT1Q6NXT6 567 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 CCDC62Q6P9F0 684 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 C4orf19Q8IY42 314 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 KIAA0895Q8NCT3 520 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 USP6NLQ92738 828 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 ATP6V0A1Q93050 837 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 REEP2Q9BRK0 252 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 TINF2Q9BSI4 451 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 CFHR5Q9BXR6 569 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 GTPBP4Q9BZE4 634 aaKnown RBP7.4□□□□□ -1.22
VPS41-204ENST00000413141 PDGFCQ9NRA1 345 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 BMP2KQ9NSY1 1161 aaPredicted RBP7.4□□□□□ -1.22
VPS41-204ENST00000413141 KCND2Q9NZV8 630 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 GABBR1Q9UBS5 961 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 DBR1Q9UK59 544 aaKnown RBP7.4□□□□□ -1.22
VPS41-204ENST00000413141 CTNND2Q9UQB3 1225 aa7.4□□□□□ -1.22
VPS41-204ENST00000413141 WDR81Q562E7 1941 aa7.4□□□□□ -1.23
VPS41-204ENST00000413141 EMSYQ7Z589 1322 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 GSTTP1A0A1W2PQM5 241 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 ARHGEF35A5YM69 484 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 TMEM150BA6NC51 233 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 SMTNL1A8MU46 457 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 BACH1O14867 736 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 ZNF862O60290 1169 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 DKC1O60832 514 aaKnown RBP eCLIP7.39□□□□□ -1.23
VPS41-204ENST00000413141 TBCAO75347 108 aaKnown RBP7.39□□□□□ -1.23
VPS41-204ENST00000413141 STBD1O95210 358 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 TXNP10599 105 aaKnown RBP7.39□□□□□ -1.23
VPS41-204ENST00000413141 GUCY2CP25092 1073 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 FCGRTP55899 365 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 LACTBP83111 547 aaPredicted RBP7.39□□□□□ -1.23
VPS41-204ENST00000413141 ARHGAP1Q07960 439 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 RAD51AP2Q09MP3 1159 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 STK4Q13043 487 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 PAK1Q13153 545 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 IRF5Q13568 498 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 GIT2Q14161 759 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 FAM26FQ5R3K3 315 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 CELF3Q5SZQ8 465 aaKnown RBP7.39□□□□□ -1.23
VPS41-204ENST00000413141 OLFML2BQ68BL8 750 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 PLA2G4FQ68DD2 849 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 KLHL10Q6JEL2 608 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 SWSAP1Q6NVH7 229 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 C1orf186Q6ZWK4 172 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 ANO5Q75V66 913 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 CCDC65Q8IXS2 484 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 TRMT44Q8IYL2 757 aaKnown RBP7.39□□□□□ -1.23
VPS41-204ENST00000413141 ADSSL1Q8N142 457 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 AFAP1L1Q8TED9 768 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 COPS5Q92905 334 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 HPS3Q969F9 1004 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 CCDC43Q96MW1 224 aaKnown RBP7.39□□□□□ -1.23
VPS41-204ENST00000413141 MED15Q96RN5 788 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 GPR20Q99678 358 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 ARHGAP39Q9C0H5 1083 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 HSD3B7Q9H2F3 369 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 MLXIPQ9HAP2 919 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 ZNF302Q9NR11 478 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 ANKEF1Q9NU02 776 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 PANK4Q9NVE7 773 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 FLRT1Q9NZU1 646 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 MAFBQ9Y5Q3 323 aaPredicted RBP7.39□□□□□ -1.23
VPS41-204ENST00000413141 CASP8AP2Q9UKL3 1982 aa7.39□□□□□ -1.23
VPS41-204ENST00000413141 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.38□□□□□ -1.23
VPS41-204ENST00000413141 RSPH10B2B2RC85 870 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 NOP56O00567 594 aaKnown RBP7.38□□□□□ -1.23
VPS41-204ENST00000413141 PSMA7O14818 248 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 AP5Z1O43299 807 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 USO1O60763 962 aaKnown RBP7.38□□□□□ -1.23
VPS41-204ENST00000413141 LGR5O75473 907 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 GH1P01241 217 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 IGHA2P01877 340 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 OATP04181 439 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 RSPH10BP0C881 870 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 GAP43P17677 238 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 PTGS1P23219 599 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 TCF7P36402 384 aaPredicted RBP7.38□□□□□ -1.23
VPS41-204ENST00000413141 MAP2K2P36507 400 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 PPP1R2P41236 205 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 ADCYAP1R1P41586 468 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 PRCPP42785 496 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 VEGFBP49765 207 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 ZNF131P52739 623 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 TPM4P67936 248 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 HTRA3P83110 453 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 MAPK7Q13164 816 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 PSMD2Q13200 908 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 STIM1Q13586 685 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 ACVR2BQ13705 512 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 CCL14Q16627 93 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 HSDL1Q3SXM5 330 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 TMEM63BQ5T3F8 832 aa7.38□□□□□ -1.23
VPS41-204ENST00000413141 UTP14CQ5TAP6 766 aaKnown RBP7.38□□□□□ -1.23
VPS41-204ENST00000413141 FAM160B1Q5W0V3 765 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms