RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 PNMA2Q9UL42 364 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 FZD1Q9UP38 647 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 PHIPQ8WWQ0 1821 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 VWA5AO00534 786 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 EIF3DO15371 548 aaKnown RBP eCLIP27.04■■□□□ 1.92
VRK2-202ENST00000412104 DHX15O43143 795 aaKnown RBP27.04■■□□□ 1.92
VRK2-202ENST00000412104 ARHGAP27Q6ZUM4 889 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 MIER3Q7Z3K6 550 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 FRMD5Q7Z6J6 570 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 JAKMIP2Q96AA8 810 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 ATG4CQ96DT6 458 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 WNK4Q96J92 1243 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 TRERF1Q96PN7 1200 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 LSM14BQ9BX40 385 aaKnown RBP27.04■■□□□ 1.92
VRK2-202ENST00000412104 JADE2Q9NQC1 790 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 CEP72Q9P209 647 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 CDC23Q9UJX2 597 aa27.04■■□□□ 1.92
VRK2-202ENST00000412104 COL11A1P12107 1806 aaPredicted RBP27.03■■□□□ 1.92
VRK2-202ENST00000412104 RLFQ13129 1914 aa27.03■■□□□ 1.92
VRK2-202ENST00000412104 FDX1P10109 184 aa27.03■■□□□ 1.92
VRK2-202ENST00000412104 EIF2AK2P19525 551 aaKnown RBP27.03■■□□□ 1.92
VRK2-202ENST00000412104 KCNA1Q09470 495 aa27.03■■□□□ 1.92
VRK2-202ENST00000412104 ITGB3BPQ13352 177 aaPredicted RBP27.03■■□□□ 1.92
VRK2-202ENST00000412104 NOL4O94818 638 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 NR3C1P04150 777 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 NMT1P30419 496 aaKnown RBP27.02■■□□□ 1.92
VRK2-202ENST00000412104 ZNF131P52739 623 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 PGM5Q15124 567 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 ARMCX3Q9UH62 379 aaPredicted RBP27.02■■□□□ 1.92
VRK2-202ENST00000412104 ODF2LQ9ULJ1 636 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 ZMYM2Q9UBW7 1377 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 RCCD1A6NED2 376 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 ZNF263O14978 683 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 KRT86O43790 486 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 EPS15P42566 896 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 CYP27A1Q02318 531 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 KCNH2Q12809 1159 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 MTMR1Q13613 665 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 TUBB2AQ13885 445 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 CRACR2AQ9BSW2 395 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 TUBB2BQ9BVA1 445 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 SEL1LQ9UBV2 794 aa27.02■■□□□ 1.92
VRK2-202ENST00000412104 MYH11P35749 1972 aa27.01■■□□□ 1.91
VRK2-202ENST00000412104 H2AFXP16104 143 aaPredicted RBP27.01■■□□□ 1.91
VRK2-202ENST00000412104 RNF207Q6ZRF8 634 aa27.01■■□□□ 1.91
VRK2-202ENST00000412104 FIZ1Q96SL8 496 aa27.01■■□□□ 1.91
VRK2-202ENST00000412104 LACRTQ9GZZ8 138 aa27.01■■□□□ 1.91
VRK2-202ENST00000412104 GPRC5DQ9NZD1 345 aa27.01■■□□□ 1.91
VRK2-202ENST00000412104 RPL13P26373 211 aaKnown RBP27■■□□□ 1.91
VRK2-202ENST00000412104 EIF4A3P38919 411 aaKnown RBP27■■□□□ 1.91
VRK2-202ENST00000412104 KIF11P52732 1056 aa27■■□□□ 1.91
VRK2-202ENST00000412104 VAV2P52735 878 aa27■■□□□ 1.91
VRK2-202ENST00000412104 SPA17Q15506 151 aa27■■□□□ 1.91
VRK2-202ENST00000412104 RSRC2Q7L4I2 434 aaKnown RBP27■■□□□ 1.91
VRK2-202ENST00000412104 NLRC4Q9NPP4 1024 aa27■■□□□ 1.91
VRK2-202ENST00000412104 GGA3Q9NZ52 723 aa27■■□□□ 1.91
VRK2-202ENST00000412104 ARHGEF35A5YM69 484 aa27■■□□□ 1.91
VRK2-202ENST00000412104 SLC16A3O15427 465 aaKnown RBP27■■□□□ 1.91
VRK2-202ENST00000412104 TGFB1I1O43294 461 aa27■■□□□ 1.91
VRK2-202ENST00000412104 AKAP3O75969 853 aa27■■□□□ 1.91
VRK2-202ENST00000412104 GUCY2CP25092 1073 aa27■■□□□ 1.91
VRK2-202ENST00000412104 HMGCS2P54868 508 aa27■■□□□ 1.91
VRK2-202ENST00000412104 NSMFQ6X4W1 530 aa27■■□□□ 1.91
VRK2-202ENST00000412104 C12orf42Q96LP6 360 aa27■■□□□ 1.91
VRK2-202ENST00000412104 PXMP2Q9NR77 195 aa27■■□□□ 1.91
VRK2-202ENST00000412104 UBE4BO95155 1302 aa26.99■■□□□ 1.91
VRK2-202ENST00000412104 SSC5DA1L4H1 1573 aa26.99■■□□□ 1.91
VRK2-202ENST00000412104 P4HBP07237 508 aaKnown RBP26.99■■□□□ 1.91
VRK2-202ENST00000412104 ZC2HC1CQ53FD0 456 aaPredicted RBP26.99■■□□□ 1.91
VRK2-202ENST00000412104 GPIHBP1Q8IV16 184 aa26.99■■□□□ 1.91
VRK2-202ENST00000412104 EHBP1Q8NDI1 1231 aa26.99■■□□□ 1.91
VRK2-202ENST00000412104 RMDN3Q96TC7 470 aa26.99■■□□□ 1.91
VRK2-202ENST00000412104 PDCD2LQ9BRP1 358 aa26.99■■□□□ 1.91
VRK2-202ENST00000412104 DEF6Q9H4E7 631 aa26.99■■□□□ 1.91
VRK2-202ENST00000412104 ZSWIM4Q9H7M6 989 aa26.99■■□□□ 1.91
VRK2-202ENST00000412104 RNF146Q9NTX7 359 aa26.99■■□□□ 1.91
VRK2-202ENST00000412104 RIPK3Q9Y572 518 aa26.99■■□□□ 1.91
VRK2-202ENST00000412104 ZHX2Q9Y6X8 837 aa26.99■■□□□ 1.91
VRK2-202ENST00000412104 DICER1Q9UPY3 1922 aaKnown RBP26.98■■□□□ 1.91
VRK2-202ENST00000412104 CLIC2O15247 247 aa26.98■■□□□ 1.91
VRK2-202ENST00000412104 LCA5LO95447 670 aa26.98■■□□□ 1.91
VRK2-202ENST00000412104 MYCLP12524 364 aaPredicted RBP26.98■■□□□ 1.91
VRK2-202ENST00000412104 POLR2FP61218 127 aaKnown RBP26.98■■□□□ 1.91
VRK2-202ENST00000412104 FAM178BQ8IXR5 827 aa26.98■■□□□ 1.91
VRK2-202ENST00000412104 REPS2Q8NFH8 660 aa26.98■■□□□ 1.91
VRK2-202ENST00000412104 NUCKS1Q9H1E3 243 aaKnown RBP26.98■■□□□ 1.91
VRK2-202ENST00000412104 EPB41P11171 864 aaKnown RBP26.98■■□□□ 1.91
VRK2-202ENST00000412104 AMPD2Q01433 879 aa26.98■■□□□ 1.91
VRK2-202ENST00000412104 APBA1Q02410 837 aa26.98■■□□□ 1.91
VRK2-202ENST00000412104 TEX35Q5T0J7 233 aa26.98■■□□□ 1.91
VRK2-202ENST00000412104 ZNF720Q7Z2F6 126 aa26.98■■□□□ 1.91
VRK2-202ENST00000412104 SRGAP1Q7Z6B7 1085 aa26.98■■□□□ 1.91
VRK2-202ENST00000412104 GOLGA1Q92805 767 aa26.98■■□□□ 1.91
VRK2-202ENST00000412104 METTL14Q9HCE5 456 aaKnown RBP26.98■■□□□ 1.91
VRK2-202ENST00000412104 TBC1D22BQ9NU19 505 aa26.98■■□□□ 1.91
VRK2-202ENST00000412104 HIP1RO75146 1068 aa26.97■■□□□ 1.91
VRK2-202ENST00000412104 AFPP02771 609 aaKnown RBP26.97■■□□□ 1.91
VRK2-202ENST00000412104 XRCC5P13010 732 aaKnown RBP26.97■■□□□ 1.91
VRK2-202ENST00000412104 CASP4P49662 377 aa26.97■■□□□ 1.91
VRK2-202ENST00000412104 ODR4Q5SWX8 454 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms