RNA–Protein interactions for RNA: ENST00000410020.7

DYSF-208, Transcript of dysferlin, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DYSF-208	ENST00000410020	WDR11	Q9BZH6	1224 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	RBM12	Q9NTZ6	932 aa	Known RBP	13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	HPSE	Q9Y251	543 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	MEIS1	O00470	390 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	ATP2B4	P23634	1241 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	COASY	Q13057	564 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	NCAPH	Q15003	741 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	ZIM3	Q96PE6	472 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	AGPAT5	Q9NUQ2	364 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	CYP27B1	O15528	508 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	BRAF	P15056	766 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	DBN1	Q16643	649 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	FGFR1OP2	Q9NVK5	253 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	SUFU	Q9UMX1	484 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	THRAP3	Q9Y2W1	955 aa	Known RBP	13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	HECW2	Q9P2P5	1572 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	RASA4B	C9J798	803 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	RASA4	O43374	803 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	PTPA	Q15257	358 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	ECT2	Q9H8V3	914 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	MECOM	Q03112	1051 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	DHX34	Q14147	1143 aa	Known RBP	13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	PTGIS	Q16647	500 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	BSPRY	Q5W0U4	402 aa		13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	SYT2	Q8N9I0	419 aa	Predicted RBP	13.74	□□□□□ -0.21
DYSF-208	ENST00000410020	ALK	Q9UM73	1620 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	FAM205C	A6NFA0	338 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	KRT14	P02533	472 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	KRT19	P08727	400 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	DMP1	Q13316	513 aa	Predicted RBP	13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	AGBL2	Q5U5Z8	902 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	TRAPPC11	Q7Z392	1133 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	SRRM1	Q8IYB3	904 aa	Known RBP	13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	CDKL2	Q92772	493 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	TRIM55	Q9BYV6	548 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	DNAJC17	Q9NVM6	304 aa	Known RBP	13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	AMACR	Q9UHK6	382 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	IPO5	O00410	1097 aa	Known RBP	13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	AGT	P01019	485 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	FCER1A	P12319	257 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	KRT81	Q14533	505 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	SLC18A3	Q16572	532 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	CERKL	Q49MI3	558 aa	Predicted RBP	13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	CYFIP2	Q96F07	1278 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	HPS5	Q9UPZ3	1129 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	ST13P4	Q8IZP2	240 aa	Predicted RBP	13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	GRAMD1A	Q96CP6	724 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	YY1AP1	Q9H869	796 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	KCND1	Q9NSA2	647 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	LEMD3	Q9Y2U8	911 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	CENPU	Q71F23	418 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	CCT6B	Q92526	530 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	THOC1	Q96FV9	657 aa	Known RBP	13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	LRRC37B	Q96QE4	947 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	FAM167B	Q9BTA0	163 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	BHMT2	Q9H2M3	363 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	NR3C1	P04150	777 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	KRT1	P04264	644 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	RFFL	Q8WZ73	363 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	POMGNT1	Q8WZA1	660 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	XPO6	Q96QU8	1125 aa	Known RBP	13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	MIS12	Q9H081	205 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	TACC3	Q9Y6A5	838 aa		13.73	□□□□□ -0.21
DYSF-208	ENST00000410020	PNMA6F	A0A0J9YX94	578 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	CRCP	O75575	148 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	TAF12	Q16514	161 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	UBE2S	Q16763	222 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	ISCA1	Q9BUE6	129 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020		A0A1W2PQJ5	194 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	PPFIA2	O75334	1257 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	SEC24C	P53992	1094 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	GPC5	P78333	572 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	TRIM65	Q6PJ69	517 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	ZC3H18	Q86VM9	953 aa	Known RBP	13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	MAP7D3	Q8IWC1	876 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	CENPK	Q9BS16	269 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	DDX23	Q9BUQ8	820 aa	Known RBP	13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	RAB21	Q9UL25	225 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	MAD1L1	Q9Y6D9	718 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020		E9PCH4	1651 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	WDR17	Q8IZU2	1322 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	PPP2R5D	Q14738	602 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	NLRP7	Q8WX94	980 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	TGS1	Q96RS0	853 aa	Known RBP	13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	PPP1R3G	B7ZBB8	358 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	HNRNPDL	O14979	420 aa	Known RBP	13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	ANXA13	P27216	316 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	GRM4	Q14833	912 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	PDS5A	Q29RF7	1337 aa	Known RBP	13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	GYG2	O15488	501 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	P4HA1	P13674	534 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	CRKL	P46109	303 aa	Known RBP	13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	RNF207	Q6ZRF8	634 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	ZNF526	Q8TF50	670 aa	Predicted RBP	13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	SEC16B	Q96JE7	1060 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	TMEM47	Q9BQJ4	181 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	ANO3	Q9BYT9	981 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	BARHL2	Q9NY43	387 aa		13.72	□□□□□ -0.21
DYSF-208	ENST00000410020	UTY	O14607	1347 aa		13.72	□□□□□ -0.21

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