RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 VWA3BQ502W6 1294 aa17.12■□□□□ 0.33
CCDC85A-201ENST00000407595 GKAP1Q5VSY0 366 aaPredicted RBP17.12■□□□□ 0.33
CCDC85A-201ENST00000407595 SPZ1Q9BXG8 430 aa17.12■□□□□ 0.33
CCDC85A-201ENST00000407595 ODF2LQ9ULJ1 636 aa17.12■□□□□ 0.33
CCDC85A-201ENST00000407595 NOP56O00567 594 aaKnown RBP17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 FOSP01100 380 aaPredicted RBP17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 DLATP10515 647 aaKnown RBP17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 CARSP49589 748 aaKnown RBP17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 HERVK_113P62684 666 aa17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 APBA1Q02410 837 aa17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 DCAF15Q66K64 600 aa17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 MICALL2Q8IY33 904 aa17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 NCAPGQ9BPX3 1015 aa17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 A0A1B0GUA9 196 aa17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 SLC37A4O43826 429 aa17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 HNRNPH1P31943 449 aaKnown RBP17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 KSR1Q8IVT5 923 aa17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 TCP11Q8WWU5 503 aa17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 SH3GLB2Q9NR46 395 aa17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 EMILIN3Q9NT22 766 aa17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 RBM12Q9NTZ6 932 aaKnown RBP17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 CAPN6Q9Y6Q1 641 aa17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 KDM3AQ9Y4C1 1321 aa17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 LAD1O00515 517 aa17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 PPP1R16BQ96T49 567 aa17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 ZNF70Q9UC06 446 aaPredicted RBP17.11■□□□□ 0.33
CCDC85A-201ENST00000407595 A0A1W2PQC6 194 aa17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 MYBL2P10244 700 aa17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 SEPT7Q16181 437 aaKnown RBP17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 NT5DC1Q5TFE4 455 aa17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 U2AF1L4Q8WU68 220 aaKnown RBP17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 ZIM3Q96PE6 472 aa17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 TEKT3Q9BXF9 490 aa17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 ZNRF3Q9ULT6 936 aa17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 ATP8A1Q9Y2Q0 1164 aa17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 PMS1P54277 932 aaKnown RBP17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 PALM3A6NDB9 673 aaPredicted RBP17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 LRRN2O75325 713 aa17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 HMGCS2P54868 508 aa17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 HHIPL2Q6UWX4 724 aa17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 RSRC1Q96IZ7 334 aaKnown RBP17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 CNOT7Q9UIV1 285 aaKnown RBP17.1■□□□□ 0.33
CCDC85A-201ENST00000407595 NEBLO76041 1014 aa17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 ELOA2Q8IYF1 753 aaPredicted RBP17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 DISP2A7MBM2 1401 aa17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 GOLGA8IPA6NC78 632 aa17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 GOLGA8JA6NMD2 632 aa17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 SYF2O95926 243 aaKnown RBP17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 SNCBQ16143 134 aa17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 SPATS2Q86XZ4 545 aaKnown RBP17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 PRR12Q9ULL5 1215 aa17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 PDE2AO00408 941 aaPredicted RBP17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 CALUO43852 315 aaPredicted RBP17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 RHBDL3P58872 404 aa17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 IGBP1P78318 339 aa17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 OR2W6PQ8NHA6 318 aa17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 N4BP2L2Q92802 583 aaPredicted RBP17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 DCPSQ96C86 337 aaKnown RBP17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 MED15Q96RN5 788 aa17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 FNBP1Q96RU3 617 aa17.09■□□□□ 0.33
CCDC85A-201ENST00000407595 FAM208AQ9UK61 1670 aaKnown RBP17.08■□□□□ 0.33
CCDC85A-201ENST00000407595 SMTNP53814 917 aa17.08■□□□□ 0.33
CCDC85A-201ENST00000407595 DHX9Q08211 1270 aaKnown RBP17.08■□□□□ 0.33
CCDC85A-201ENST00000407595 HIBCHQ6NVY1 386 aaPredicted RBP17.08■□□□□ 0.33
CCDC85A-201ENST00000407595 SFR1Q86XK3 245 aa17.08■□□□□ 0.33
CCDC85A-201ENST00000407595 AKT1S1Q96B36 256 aa17.08■□□□□ 0.33
CCDC85A-201ENST00000407595 NSRP1Q9H0G5 558 aaKnown RBP17.08■□□□□ 0.33
CCDC85A-201ENST00000407595 STK38LQ9Y2H1 464 aa17.08■□□□□ 0.33
CCDC85A-201ENST00000407595 COL4A3BPQ9Y5P4 624 aa17.08■□□□□ 0.33
CCDC85A-201ENST00000407595 FAM237AA0A1B0GTK4 181 aa17.08■□□□□ 0.32
CCDC85A-201ENST00000407595 DCAF8L1A6NGE4 600 aa17.08■□□□□ 0.32
CCDC85A-201ENST00000407595 IL1R1P14778 569 aa17.08■□□□□ 0.32
CCDC85A-201ENST00000407595 FKBP3Q00688 224 aaKnown RBP17.08■□□□□ 0.32
CCDC85A-201ENST00000407595 APOBEC3HQ6NTF7 200 aaKnown RBP17.08■□□□□ 0.32
CCDC85A-201ENST00000407595 RSBN1LQ6PCB5 846 aaPredicted RBP17.08■□□□□ 0.32
CCDC85A-201ENST00000407595 TRIM9Q9C026 710 aa17.08■□□□□ 0.32
CCDC85A-201ENST00000407595 MEFVO15553 781 aaPredicted RBP17.08■□□□□ 0.32
CCDC85A-201ENST00000407595 CTNND1O60716 968 aaKnown RBP17.08■□□□□ 0.32
CCDC85A-201ENST00000407595 MTMR2Q13614 643 aa17.08■□□□□ 0.32
CCDC85A-201ENST00000407595 METTL13Q8N6R0 699 aa17.08■□□□□ 0.32
CCDC85A-201ENST00000407595 RMDN3Q96TC7 470 aa17.08■□□□□ 0.32
CCDC85A-201ENST00000407595 GCFC2P16383 781 aaKnown RBP17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 NLRP14Q86W24 1093 aa17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 LDHDQ86WU2 507 aa17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 DYDC2Q96IM9 177 aa17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 AGBL1Q96MI9 1066 aa17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 LARSQ9P2J5 1176 aaKnown RBP17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 RASAL2Q9UJF2 1139 aa17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 ZSCAN5CA6NGD5 496 aaPredicted RBP17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 LRRIQ4A6NIV6 560 aa17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 PPP1R37O75864 691 aa17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 CNKSR2Q8WXI2 1034 aa17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 RNPC3Q96LT9 517 aaKnown RBP17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 CCT8L2Q96SF2 557 aa17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 ZMYND12Q9H0C1 365 aa17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 DDX47Q9H0S4 455 aaKnown RBP17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 GOLPH3Q9H4A6 298 aa17.07■□□□□ 0.32
CCDC85A-201ENST00000407595 LSP1P33241 339 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 CYP2W1Q8TAV3 490 aa17.06■□□□□ 0.32
CCDC85A-201ENST00000407595 DCAF4Q8WV16 495 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms