RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 CNOT7Q9UIV1 285 aaKnown RBP24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 TACC3Q9Y6A5 838 aa24.29■■□□□ 1.48
CUEDC1-202ENST00000407144 RTL9Q8NET4 1388 aa24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 CEP104O60308 925 aa24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 ATP5HO75947 161 aa24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 UNC5CO95185 931 aa24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 FUT2Q10981 343 aa24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 SLC18A3Q16572 532 aa24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 TNFAIP8L3Q5GJ75 292 aa24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 DPY19L2Q6NUT2 758 aa24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 BTNL9Q6UXG8 535 aa24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 RASGEF1CQ8N431 466 aa24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 MIPOL1Q8TD10 442 aa24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 NEK9Q8TD19 979 aa24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 DNAJC9Q8WXX5 260 aa24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 DDX47Q9H0S4 455 aaKnown RBP24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 CUEDC2Q9H467 287 aa24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 ATP8A1Q9Y2Q0 1164 aa24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 THRAP3Q9Y2W1 955 aaKnown RBP24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 PHRF1Q9P1Y6 1649 aaKnown RBP24.28■■□□□ 1.48
CUEDC1-202ENST00000407144 ZBTB48P10074 688 aaPredicted RBP24.27■■□□□ 1.48
CUEDC1-202ENST00000407144 POLE2P56282 527 aa24.27■■□□□ 1.48
CUEDC1-202ENST00000407144 MAEAQ7L5Y9 396 aa24.27■■□□□ 1.48
CUEDC1-202ENST00000407144 IFNL3Q8IZI9 196 aa24.27■■□□□ 1.48
CUEDC1-202ENST00000407144 FITM2Q8N6M3 262 aa24.27■■□□□ 1.48
CUEDC1-202ENST00000407144 NAPBQ9H115 298 aa24.27■■□□□ 1.48
CUEDC1-202ENST00000407144 DLGAP2Q9P1A6 1054 aa24.27■■□□□ 1.48
CUEDC1-202ENST00000407144 RPL26L1Q9UNX3 145 aaKnown RBP24.27■■□□□ 1.48
CUEDC1-202ENST00000407144 PABPC1LQ4VXU2 614 aaKnown RBP24.27■■□□□ 1.48
CUEDC1-202ENST00000407144 C4orf32Q8N8J7 132 aa24.27■■□□□ 1.48
CUEDC1-202ENST00000407144 ZMYND12Q9H0C1 365 aa24.27■■□□□ 1.48
CUEDC1-202ENST00000407144 TXLNGQ9NUQ3 528 aa24.27■■□□□ 1.48
CUEDC1-202ENST00000407144 SCOCQ9UIL1 159 aa24.27■■□□□ 1.48
CUEDC1-202ENST00000407144 NOC2LQ9Y3T9 749 aaKnown RBP24.27■■□□□ 1.48
CUEDC1-202ENST00000407144 CD2APQ9Y5K6 639 aa24.27■■□□□ 1.48
CUEDC1-202ENST00000407144 KRIT1O00522 736 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 RFC5P40937 340 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 RNF220Q5VTB9 566 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 DENND2CQ68D51 928 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 RNF43Q68DV7 783 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 TAOK1Q7L7X3 1001 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 AGGF1Q8N302 714 aaeCLIP24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 RBBP8NLQ8NC74 664 aaPredicted RBP24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 AMACRQ9UHK6 382 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 PNMA3Q9UL41 463 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 ZMYND8Q9ULU4 1186 aaPredicted RBP24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 SPATA31A6Q5VVP1 1343 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 ADAMTS2O95450 1211 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 FGFR1OPO95684 399 aaKnown RBP24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 SF3A3Q12874 501 aaKnown RBP eCLIP24.26■■□□□ 1.477e-10■□□□□ 10.1
CUEDC1-202ENST00000407144 USP4Q13107 963 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 C10orf76Q5T2E6 689 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 PI16Q6UXB8 463 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 UTP4Q969X6 686 aaKnown RBP24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 AP1M1Q9BXS5 423 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 EPB41L4AQ9HCS5 686 aaPredicted RBP24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 ATP8A2Q9NTI2 1148 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 CEP72Q9P209 647 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 BLOC1S6Q9UL45 172 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 ZNF532Q9HCE3 1301 aa24.26■■□□□ 1.47
CUEDC1-202ENST00000407144 MCM7P33993 719 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 WASHC2DQ5SRD0 308 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 SFMBT2Q5VUG0 894 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 CENPPQ6IPU0 288 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 EEF2KMTQ96G04 330 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 TMEM237Q96Q45 408 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 UBE2OQ9C0C9 1292 aaKnown RBP24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 CCSER1Q9C0I3 900 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 AZI2Q9H6S1 392 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 ATXN10Q9UBB4 475 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 GGT7Q9UJ14 662 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 ATP6V0A2Q9Y487 856 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 AKAP11Q9UKA4 1901 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 MYBL1P10243 752 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 MCAMP43121 646 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 PMS2P54278 862 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 POU5F1Q01860 360 aaKnown RBP24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 ATP8B4Q8TF62 1192 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 OPTNQ96CV9 577 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 ZCWPW1Q9H0M4 648 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 LRMDAQ9H2I8 198 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 LRCH1Q9Y2L9 728 aa24.25■■□□□ 1.47
CUEDC1-202ENST00000407144 MROH7Q68CQ1 1323 aa24.24■■□□□ 1.47
CUEDC1-202ENST00000407144 TCRBV5S4A2TA0A5A2 114 aa24.24■■□□□ 1.47
CUEDC1-202ENST00000407144 NKRFO15226 690 aaKnown RBP eCLIP24.24■■□□□ 1.47
CUEDC1-202ENST00000407144 TTI1O43156 1089 aa24.24■■□□□ 1.47
CUEDC1-202ENST00000407144 SNRPA1P09661 255 aaKnown RBP24.24■■□□□ 1.47
CUEDC1-202ENST00000407144 IFI35P80217 286 aaPredicted RBP24.24■■□□□ 1.47
CUEDC1-202ENST00000407144 ARHGAP18Q8N392 663 aa24.24■■□□□ 1.47
CUEDC1-202ENST00000407144 TIPINQ9BVW5 301 aa24.24■■□□□ 1.47
CUEDC1-202ENST00000407144 PRDM1O75626 825 aa24.23■■□□□ 1.47
CUEDC1-202ENST00000407144 LMNAP02545 664 aaKnown RBP24.23■■□□□ 1.47
CUEDC1-202ENST00000407144 PDE4DQ08499 809 aa24.23■■□□□ 1.47
CUEDC1-202ENST00000407144 MKRN3Q13064 507 aaKnown RBP24.23■■□□□ 1.47
CUEDC1-202ENST00000407144 ACVR2BQ13705 512 aa24.23■■□□□ 1.47
CUEDC1-202ENST00000407144 ZKSCAN3Q9BRR0 538 aa24.23■■□□□ 1.47
CUEDC1-202ENST00000407144 TMCO1Q9UM00 188 aa24.23■■□□□ 1.47
CUEDC1-202ENST00000407144 TRIM33Q9UPN9 1127 aa24.23■■□□□ 1.47
CUEDC1-202ENST00000407144 SLC4A7Q9Y6M7 1214 aa24.23■■□□□ 1.47
CUEDC1-202ENST00000407144 SLC4A4Q9Y6R1 1079 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms