RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 FAM228BP0C875 321 aa13.03□□□□□ -0.32
PCNX4-204ENST00000406949 MYCLP12524 364 aaPredicted RBP13.03□□□□□ -0.32
PCNX4-204ENST00000406949 ODF2Q5BJF6 829 aa13.03□□□□□ -0.32
PCNX4-204ENST00000406949 GJB7Q6PEY0 223 aa13.03□□□□□ -0.32
PCNX4-204ENST00000406949 PEX26Q7Z412 305 aa13.03□□□□□ -0.32
PCNX4-204ENST00000406949 PROCA1Q8NCQ7 364 aaPredicted RBP13.03□□□□□ -0.32
PCNX4-204ENST00000406949 PCIF1Q9H4Z3 704 aa13.03□□□□□ -0.32
PCNX4-204ENST00000406949 MED4Q9NPJ6 270 aa13.03□□□□□ -0.32
PCNX4-204ENST00000406949 ANKRD65E5RJM6 399 aa13.02□□□□□ -0.32
PCNX4-204ENST00000406949 MSH4O15457 936 aa13.02□□□□□ -0.32
PCNX4-204ENST00000406949 ZEB2O60315 1214 aa13.02□□□□□ -0.32
PCNX4-204ENST00000406949 KRT13P13646 458 aa13.02□□□□□ -0.32
PCNX4-204ENST00000406949 CASP4P49662 377 aa13.02□□□□□ -0.32
PCNX4-204ENST00000406949 IFI16Q16666 785 aaKnown RBP13.02□□□□□ -0.32
PCNX4-204ENST00000406949 CFAP58Q5T655 872 aa13.02□□□□□ -0.32
PCNX4-204ENST00000406949 DAAM2Q86T65 1068 aa13.02□□□□□ -0.32
PCNX4-204ENST00000406949 BANK1Q8NDB2 785 aa13.02□□□□□ -0.32
PCNX4-204ENST00000406949 RUSC1Q9BVN2 902 aa13.02□□□□□ -0.32
PCNX4-204ENST00000406949 ZBTB39O15060 712 aa13.02□□□□□ -0.32
PCNX4-204ENST00000406949 ALAS1P13196 640 aa13.02□□□□□ -0.32
PCNX4-204ENST00000406949 TNNC1P63316 161 aa13.02□□□□□ -0.32
PCNX4-204ENST00000406949 ALKBH5Q6P6C2 394 aaKnown RBP13.02□□□□□ -0.32
PCNX4-204ENST00000406949 IFT20Q8IY31 132 aa13.02□□□□□ -0.32
PCNX4-204ENST00000406949 CNKSR1Q969H4 720 aa13.02□□□□□ -0.32
PCNX4-204ENST00000406949 RBM12Q9NTZ6 932 aaKnown RBP13.02□□□□□ -0.32
PCNX4-204ENST00000406949 SCN7AQ01118 1682 aa13.02□□□□□ -0.33
PCNX4-204ENST00000406949 MEIS2O14770 477 aa13.02□□□□□ -0.33
PCNX4-204ENST00000406949 TRIM49P0CI25 452 aa13.02□□□□□ -0.33
PCNX4-204ENST00000406949 TRIM49CP0CI26 452 aa13.02□□□□□ -0.33
PCNX4-204ENST00000406949 STAT1P42224 750 aa13.02□□□□□ -0.33
PCNX4-204ENST00000406949 KCNA1Q09470 495 aa13.02□□□□□ -0.33
PCNX4-204ENST00000406949 KCNMA1Q12791 1236 aa13.02□□□□□ -0.33
PCNX4-204ENST00000406949 CHURC1Q8WUH1 139 aa13.02□□□□□ -0.33
PCNX4-204ENST00000406949 IKZF4Q9H2S9 585 aa13.02□□□□□ -0.33
PCNX4-204ENST00000406949 FBXO28Q9NVF7 368 aa13.02□□□□□ -0.33
PCNX4-204ENST00000406949 NFU1Q9UMS0 254 aa13.02□□□□□ -0.33
PCNX4-204ENST00000406949 SORBS3O60504 671 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 TRAF1Q13077 416 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 AP1M1Q9BXS5 423 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 STIM2Q9P246 746 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 ABCB11O95342 1321 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 IGKV6D-41A0A0C4DH26 115 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 K7ENM7 598 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 H2AFZP0C0S5 128 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 MYBL2P10244 700 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 RPA1P27694 616 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 ATP1A2P50993 1020 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 NSMFQ6X4W1 530 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 H2AFVQ71UI9 128 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 FAM20AQ96MK3 541 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 BCAS3Q9H6U6 928 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 PARVGQ9HBI0 331 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 CCPG1Q9ULG6 757 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 MAP2K7O14733 419 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 PTK2Q05397 1052 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 GIT2Q14161 759 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 BAP1Q92560 729 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 METTL14Q9HCE5 456 aaKnown RBP13.01□□□□□ -0.33
PCNX4-204ENST00000406949 TSKSQ9UJT2 592 aa13.01□□□□□ -0.33
PCNX4-204ENST00000406949 OPA1O60313 960 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 UCHL3P15374 230 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 ACTN2P35609 894 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 CETN1Q12798 172 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 SLC18A3Q16572 532 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 DACT2Q5SW24 774 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 CCNI2Q6ZMN8 369 aaPredicted RBP13□□□□□ -0.33
PCNX4-204ENST00000406949 PPP4R3CPQ6ZMV5 832 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 MIER3Q7Z3K6 550 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 TRIM59Q8IWR1 403 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 ZNF277Q9NRM2 450 aaPredicted RBP13□□□□□ -0.33
PCNX4-204ENST00000406949 SSU72P8A0A1W2PR75 194 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 EML1O00423 815 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 TNFAIP3P21580 790 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 HMGB2P26583 209 aaKnown RBP13□□□□□ -0.33
PCNX4-204ENST00000406949 HPDP32754 393 aaPredicted RBP13□□□□□ -0.33
PCNX4-204ENST00000406949 FLAD1Q8NFF5 587 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 CTNNBL1Q8WYA6 563 aaPredicted RBP13□□□□□ -0.33
PCNX4-204ENST00000406949 EHD4Q9H223 541 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 SALL4Q9UJQ4 1053 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 HPCAL4Q9UM19 191 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 MRPL11Q9Y3B7 192 aaKnown RBP13□□□□□ -0.33
PCNX4-204ENST00000406949 BTAF1O14981 1849 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 CCDC169A6NNP5 214 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 AKAP3O75969 853 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
PCNX4-204ENST00000406949 CDK17Q00537 523 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 WDR93Q6P2C0 686 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 SH3BP5LQ7L8J4 393 aa13□□□□□ -0.33
PCNX4-204ENST00000406949 TYW1Q9NV66 732 aaKnown RBP13□□□□□ -0.33
PCNX4-204ENST00000406949 TNRC6CQ9HCJ0 1690 aaKnown RBP12.99□□□□□ -0.33
PCNX4-204ENST00000406949 ZSCAN5CA6NGD5 496 aaPredicted RBP12.99□□□□□ -0.33
PCNX4-204ENST00000406949 PSMC2P35998 433 aaKnown RBP12.99□□□□□ -0.33
PCNX4-204ENST00000406949 PAK2Q13177 524 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 LLGL1Q15334 1064 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 ARSHQ5FYA8 562 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 ZFYVE27Q5T4F4 411 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 CREG2Q8IUH2 290 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 TEKT3Q9BXF9 490 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 KCNMB3Q9NPA1 279 aa12.99□□□□□ -0.33
PCNX4-204ENST00000406949 FAM53CQ9NYF3 392 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms