RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 CD302Q8IX05 232 aa20.22■□□□□ 0.83
EWSR1-207ENST00000406548 SH2D3CQ8N5H7 860 aa20.22■□□□□ 0.83
EWSR1-207ENST00000406548 SYT2Q8N9I0 419 aaPredicted RBP20.22■□□□□ 0.83
EWSR1-207ENST00000406548 DNM3Q9UQ16 869 aa20.22■□□□□ 0.83
EWSR1-207ENST00000406548 MEIS1O00470 390 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 TBX3O15119 743 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 XRCC5P13010 732 aaKnown RBP20.21■□□□□ 0.83
EWSR1-207ENST00000406548 PON1P27169 355 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 RPA1P27694 616 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 HOXD13P35453 343 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 NFIAQ12857 509 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 KCTD16Q68DU8 428 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 PIK3R5Q8WYR1 880 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 DNAJC18Q9H819 358 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 NAGPAQ9UK23 515 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 PDXKO00764 312 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 SPATA31C1P0DKV0 1188 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 PRKCIP41743 596 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 DDR1Q08345 913 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 Q4G0T1 1027 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 SLFN13Q68D06 897 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 KLHL7Q8IXQ5 586 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 PBKQ96KB5 322 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 SIPA1L1O43166 1804 aa20.21■□□□□ 0.83
EWSR1-207ENST00000406548 EEF2P13639 858 aaKnown RBP20.2■□□□□ 0.82
EWSR1-207ENST00000406548 PDCLQ13371 301 aa20.2■□□□□ 0.82
EWSR1-207ENST00000406548 TTC31Q49AM3 519 aaPredicted RBP20.2■□□□□ 0.82
EWSR1-207ENST00000406548 DCAF17Q5H9S7 520 aaPredicted RBP20.2■□□□□ 0.82
EWSR1-207ENST00000406548 HHIPL2Q6UWX4 724 aa20.2■□□□□ 0.82
EWSR1-207ENST00000406548 KDM7AQ6ZMT4 941 aa20.2■□□□□ 0.82
EWSR1-207ENST00000406548 LRRC57Q8N9N7 239 aa20.2■□□□□ 0.82
EWSR1-207ENST00000406548 RBM46Q8TBY0 533 aaKnown RBP20.2■□□□□ 0.82
EWSR1-207ENST00000406548 P2RX7Q99572 595 aaKnown RBP20.2■□□□□ 0.82
EWSR1-207ENST00000406548 RABEP2Q9H5N1 569 aa20.2■□□□□ 0.82
EWSR1-207ENST00000406548 QTRT2Q9H974 415 aaKnown RBP20.2■□□□□ 0.82
EWSR1-207ENST00000406548 ANXA13P27216 316 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 NOP2P46087 812 aaKnown RBP20.19■□□□□ 0.82
EWSR1-207ENST00000406548 EPHA7Q15375 998 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 TRADDQ15628 312 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 BMT2Q1RMZ1 405 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 APOBEC3HQ6NTF7 200 aaKnown RBP20.19■□□□□ 0.82
EWSR1-207ENST00000406548 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.19■□□□□ 0.822e-7■■■■■ 64.2
EWSR1-207ENST00000406548 TEKT1Q969V4 418 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 MKL1Q969V6 931 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 LENG9Q96B70 501 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 ZC3H12CQ9C0D7 883 aaKnown RBP20.19■□□□□ 0.82
EWSR1-207ENST00000406548 TYW1Q9NV66 732 aaKnown RBP20.19■□□□□ 0.82
EWSR1-207ENST00000406548 ATP8B3O60423 1300 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 A0A087WUV0 522 aaPredicted RBP20.19■□□□□ 0.82
EWSR1-207ENST00000406548 KLRG2A4D1S0 409 aaPredicted RBP20.19■□□□□ 0.82
EWSR1-207ENST00000406548 SLC16A3O15427 465 aaKnown RBP20.19■□□□□ 0.82
EWSR1-207ENST00000406548 FLOT1O75955 427 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 AKAP3O75969 853 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 MCTP2Q6DN12 878 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 ALKBH5Q6P6C2 394 aaKnown RBP20.19■□□□□ 0.82
EWSR1-207ENST00000406548 ACTRT1Q8TDG2 376 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 GOLPH3Q9H4A6 298 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 TAF1DQ9H5J8 278 aaPredicted RBP20.19■□□□□ 0.82
EWSR1-207ENST00000406548 METTL14Q9HCE5 456 aaKnown RBP20.19■□□□□ 0.82
EWSR1-207ENST00000406548 FBXL5Q9UKA1 691 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 NENFQ9UMX5 172 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 ASTN1O14525 1302 aa20.19■□□□□ 0.82
EWSR1-207ENST00000406548 NR3C1P04150 777 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 HSPA9P38646 679 aaKnown RBP20.18■□□□□ 0.82
EWSR1-207ENST00000406548 ATP1A2P50993 1020 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 SHROOM1Q2M3G4 852 aaPredicted RBP20.18■□□□□ 0.82
EWSR1-207ENST00000406548 TADA2BQ86TJ2 420 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 PACS2Q86VP3 889 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 ZFPM1Q8IX07 1006 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 EIF1ADQ8N9N8 165 aaKnown RBP20.18■□□□□ 0.82
EWSR1-207ENST00000406548 SCFD2Q8WU76 684 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 ISCUQ9H1K1 167 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 NYAP2Q9P242 653 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 STK24Q9Y6E0 443 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 FAM169AQ9Y6X4 670 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 CEP104O60308 925 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 CPP00450 1065 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 RPL13P26373 211 aaKnown RBP20.18■□□□□ 0.82
EWSR1-207ENST00000406548 JAM2P57087 298 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 ERVK-9P63128 1117 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 C1orf131Q8NDD1 294 aaKnown RBP20.18■□□□□ 0.82
EWSR1-207ENST00000406548 AMNQ9BXJ7 453 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 SIX2Q9NPC8 291 aa20.18■□□□□ 0.82
EWSR1-207ENST00000406548 RSPH10B2B2RC85 870 aa20.17■□□□□ 0.82
EWSR1-207ENST00000406548 FAM86B1E9PN63 330 aa20.17■□□□□ 0.82
EWSR1-207ENST00000406548 POLRMTO00411 1230 aaKnown RBP20.17■□□□□ 0.82
EWSR1-207ENST00000406548 FAM86B2P0C5J1 330 aa20.17■□□□□ 0.82
EWSR1-207ENST00000406548 RSPH10BP0C881 870 aa20.17■□□□□ 0.82
EWSR1-207ENST00000406548 DOK7Q18PE1 504 aa20.17■□□□□ 0.82
EWSR1-207ENST00000406548 TCERG1LQ5VWI1 586 aa20.17■□□□□ 0.82
EWSR1-207ENST00000406548 DNAAF5Q86Y56 855 aa20.17■□□□□ 0.82
EWSR1-207ENST00000406548 TPCN2Q8NHX9 752 aa20.17■□□□□ 0.82
EWSR1-207ENST00000406548 SLC35C1Q96A29 364 aa20.17■□□□□ 0.82
EWSR1-207ENST00000406548 CALR3Q96L12 384 aaKnown RBP20.17■□□□□ 0.82
EWSR1-207ENST00000406548 FAM20AQ96MK3 541 aa20.17■□□□□ 0.82
EWSR1-207ENST00000406548 AJAP1Q9UKB5 411 aaPredicted RBP20.17■□□□□ 0.82
EWSR1-207ENST00000406548 SPDYE3A6NKU9 549 aa20.17■□□□□ 0.82
EWSR1-207ENST00000406548 FAM196BA6NMK8 535 aa20.17■□□□□ 0.82
EWSR1-207ENST00000406548 VGLL3A8MV65 326 aa20.17■□□□□ 0.82
EWSR1-207ENST00000406548 PGRMC1O00264 195 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms